RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.05□□□□□ -0.48
GTF3C1-201ENST00000356183 CAPN11Q9UMQ6 739 aa12.05□□□□□ -0.48
GTF3C1-201ENST00000356183 CFAP43Q8NDM7 1665 aa12.05□□□□□ -0.48
GTF3C1-201ENST00000356183 EIF2AK4Q9P2K8 1649 aaKnown RBP12.05□□□□□ -0.48
GTF3C1-201ENST00000356183 SGSM2O43147 1006 aa12.05□□□□□ -0.48
GTF3C1-201ENST00000356183 IFRD2Q12894 506 aaPredicted RBP12.05□□□□□ -0.48
GTF3C1-201ENST00000356183 TPH2Q8IWU9 490 aa12.05□□□□□ -0.48
GTF3C1-201ENST00000356183 EXOC4Q96A65 974 aa12.05□□□□□ -0.48
GTF3C1-201ENST00000356183 KLHL29Q96CT2 875 aa12.05□□□□□ -0.48
GTF3C1-201ENST00000356183 VPS54Q9P1Q0 977 aa12.05□□□□□ -0.48
GTF3C1-201ENST00000356183 BIN2Q9UBW5 565 aaPredicted RBP12.05□□□□□ -0.48
GTF3C1-201ENST00000356183 SYNJ2BP-COX16A0A087WUM0 186 aa12.05□□□□□ -0.48
GTF3C1-201ENST00000356183 EVI5O60447 810 aa12.05□□□□□ -0.48
GTF3C1-201ENST00000356183 S100BP04271 92 aaPredicted RBP12.05□□□□□ -0.48
GTF3C1-201ENST00000356183 FAM102BQ5T8I3 360 aa12.05□□□□□ -0.48
GTF3C1-201ENST00000356183 COX16Q9P0S2 106 aa12.05□□□□□ -0.48
GTF3C1-201ENST00000356183 NPC1L1Q9UHC9 1359 aa12.05□□□□□ -0.48
GTF3C1-201ENST00000356183 A0A087WUV0 522 aaPredicted RBP12.05□□□□□ -0.48
GTF3C1-201ENST00000356183 MUM1L1Q5H9M0 696 aa12.05□□□□□ -0.48
GTF3C1-201ENST00000356183 OR8K1Q8NGG5 319 aa12.05□□□□□ -0.48
GTF3C1-201ENST00000356183 TBK1Q9UHD2 729 aa12.05□□□□□ -0.48
GTF3C1-201ENST00000356183 NCF2P19878 526 aaPredicted RBP12.05□□□□□ -0.48
GTF3C1-201ENST00000356183 HMGB2P26583 209 aaKnown RBP12.05□□□□□ -0.48
GTF3C1-201ENST00000356183 KRT24Q2M2I5 525 aa12.05□□□□□ -0.48
GTF3C1-201ENST00000356183 ZNF449Q6P9G9 518 aa12.05□□□□□ -0.48
GTF3C1-201ENST00000356183 ST13P4Q8IZP2 240 aaPredicted RBP12.05□□□□□ -0.48
GTF3C1-201ENST00000356183 ANGEL1Q9UNK9 670 aaKnown RBP12.05□□□□□ -0.48
GTF3C1-201ENST00000356183 DMRT2Q9Y5R5 561 aa12.05□□□□□ -0.48
GTF3C1-201ENST00000356183 NOS1P29475 1434 aa12.04□□□□□ -0.48
GTF3C1-201ENST00000356183 NVLO15381 856 aaKnown RBP12.04□□□□□ -0.48
GTF3C1-201ENST00000356183 BFSP1Q12934 665 aa12.04□□□□□ -0.48
GTF3C1-201ENST00000356183 ANKRD35Q8N283 1001 aa12.04□□□□□ -0.48
GTF3C1-201ENST00000356183 POLR3CQ9BUI4 534 aaPredicted RBP12.04□□□□□ -0.48
GTF3C1-201ENST00000356183 YIPF3Q9GZM5 350 aa12.04□□□□□ -0.48
GTF3C1-201ENST00000356183 G3BP2Q9UN86 482 aaKnown RBP12.04□□□□□ -0.48
GTF3C1-201ENST00000356183 ABL1P00519 1130 aa12.04□□□□□ -0.48
GTF3C1-201ENST00000356183 PDE6CP51160 858 aa12.04□□□□□ -0.48
GTF3C1-201ENST00000356183 HADHQ16836 314 aaKnown RBP12.04□□□□□ -0.48
GTF3C1-201ENST00000356183 DZIP3Q86Y13 1208 aaKnown RBP12.04□□□□□ -0.48
GTF3C1-201ENST00000356183 CMTR1Q8N1G2 835 aaKnown RBP12.04□□□□□ -0.48
GTF3C1-201ENST00000356183 CD2APQ9Y5K6 639 aa12.04□□□□□ -0.48
GTF3C1-201ENST00000356183 PASKQ96RG2 1323 aa12.04□□□□□ -0.48
GTF3C1-201ENST00000356183 PDHA1P08559 390 aa12.04□□□□□ -0.48
GTF3C1-201ENST00000356183 PFKFB1P16118 471 aa12.04□□□□□ -0.48
GTF3C1-201ENST00000356183 SLC35F6Q8N357 371 aa12.04□□□□□ -0.48
GTF3C1-201ENST00000356183 EPB41L5Q9HCM4 733 aa12.04□□□□□ -0.48
GTF3C1-201ENST00000356183 KDRP35968 1356 aa12.04□□□□□ -0.48
GTF3C1-201ENST00000356183 LONP1P36776 959 aaKnown RBP12.04□□□□□ -0.48
GTF3C1-201ENST00000356183 OTUD6AQ7L8S5 288 aa12.04□□□□□ -0.48
GTF3C1-201ENST00000356183 CFAP36Q96G28 342 aa12.04□□□□□ -0.48
GTF3C1-201ENST00000356183 NRBP1Q9UHY1 535 aa12.04□□□□□ -0.48
GTF3C1-201ENST00000356183 ZNF148Q9UQR1 794 aa12.04□□□□□ -0.48
GTF3C1-201ENST00000356183 CFLARO15519 480 aa12.04□□□□□ -0.48
GTF3C1-201ENST00000356183 GPC4O75487 556 aa12.04□□□□□ -0.48
GTF3C1-201ENST00000356183 TOM1L1O75674 476 aa12.04□□□□□ -0.48
GTF3C1-201ENST00000356183 PDE6BP35913 854 aa12.04□□□□□ -0.48
GTF3C1-201ENST00000356183 EHHADHQ08426 723 aa12.04□□□□□ -0.48
GTF3C1-201ENST00000356183 RFX6Q8HWS3 928 aa12.04□□□□□ -0.48
GTF3C1-201ENST00000356183 PANK4Q9NVE7 773 aa12.04□□□□□ -0.48
GTF3C1-201ENST00000356183 STK24Q9Y6E0 443 aa12.04□□□□□ -0.48
GTF3C1-201ENST00000356183 HDLBPQ00341 1268 aaKnown RBP12.03□□□□□ -0.48
GTF3C1-201ENST00000356183 ART3Q13508 389 aa12.03□□□□□ -0.48
GTF3C1-201ENST00000356183 ICE2Q659A1 982 aa12.03□□□□□ -0.48
GTF3C1-201ENST00000356183 TDRD7Q8NHU6 1098 aaKnown RBP12.03□□□□□ -0.48
GTF3C1-201ENST00000356183 SUFUQ9UMX1 484 aa12.03□□□□□ -0.48
GTF3C1-201ENST00000356183 NDUFB9Q9Y6M9 179 aa12.03□□□□□ -0.48
GTF3C1-201ENST00000356183 H7C0C1 242 aa12.03□□□□□ -0.48
GTF3C1-201ENST00000356183 CREB3O43889 395 aa12.03□□□□□ -0.48
GTF3C1-201ENST00000356183 ATP5OP48047 213 aa12.03□□□□□ -0.48
GTF3C1-201ENST00000356183 KRT40Q6A162 431 aa12.03□□□□□ -0.48
GTF3C1-201ENST00000356183 ATP8A1Q9Y2Q0 1164 aa12.03□□□□□ -0.48
GTF3C1-201ENST00000356183 XRCC5P13010 732 aaKnown RBP12.03□□□□□ -0.48
GTF3C1-201ENST00000356183 TECP42680 631 aa12.03□□□□□ -0.48
GTF3C1-201ENST00000356183 SLCO1A2P46721 670 aa12.03□□□□□ -0.48
GTF3C1-201ENST00000356183 STX1BP61266 288 aa12.03□□□□□ -0.48
GTF3C1-201ENST00000356183 RINT1Q6NUQ1 792 aa12.03□□□□□ -0.48
GTF3C1-201ENST00000356183 ZC3H18Q86VM9 953 aaKnown RBP12.03□□□□□ -0.48
GTF3C1-201ENST00000356183 NRBF2Q96F24 287 aa12.03□□□□□ -0.48
GTF3C1-201ENST00000356183 OLA1Q9NTK5 396 aaKnown RBP12.03□□□□□ -0.48
GTF3C1-201ENST00000356183 TXLNGQ9NUQ3 528 aa12.03□□□□□ -0.48
GTF3C1-201ENST00000356183 AATFQ9NY61 560 aaKnown RBP eCLIP12.03□□□□□ -0.48
GTF3C1-201ENST00000356183 FANCAO15360 1455 aa12.03□□□□□ -0.48
GTF3C1-201ENST00000356183 CCDC84Q86UT8 332 aaPredicted RBP12.03□□□□□ -0.48
GTF3C1-201ENST00000356183 GPBP1Q86WP2 473 aa12.03□□□□□ -0.48
GTF3C1-201ENST00000356183 TRIML2Q8N7C3 387 aa12.03□□□□□ -0.48
GTF3C1-201ENST00000356183 TTLL11Q8NHH1 800 aa12.03□□□□□ -0.48
GTF3C1-201ENST00000356183 TEX14Q8IWB6 1497 aa12.03□□□□□ -0.48
GTF3C1-201ENST00000356183 CXCR5P32302 372 aa12.03□□□□□ -0.48
GTF3C1-201ENST00000356183 MSH2P43246 934 aa12.03□□□□□ -0.48
GTF3C1-201ENST00000356183 YARSP54577 528 aaKnown RBP12.03□□□□□ -0.48
GTF3C1-201ENST00000356183 NONOQ15233 471 aaKnown RBP eCLIP12.03□□□□□ -0.48
GTF3C1-201ENST00000356183 THOC1Q96FV9 657 aaKnown RBP12.03□□□□□ -0.48
GTF3C1-201ENST00000356183 FGD4Q96M96 766 aa12.03□□□□□ -0.48
GTF3C1-201ENST00000356183 SPC25Q9HBM1 224 aa12.03□□□□□ -0.48
GTF3C1-201ENST00000356183 SHANK2Q9UPX8 1470 aa12.03□□□□□ -0.48
GTF3C1-201ENST00000356183 MAN1A2O60476 641 aa12.03□□□□□ -0.48
GTF3C1-201ENST00000356183 GSPT1P15170 499 aaKnown RBP12.03□□□□□ -0.48
GTF3C1-201ENST00000356183 NPR1P16066 1061 aa12.03□□□□□ -0.48
GTF3C1-201ENST00000356183 CEBPAP49715 358 aaPredicted RBP12.03□□□□□ -0.48
GTF3C1-201ENST00000356183 NGLY1Q96IV0 654 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms