RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 PNPLA7Q6ZV29 1317 aa10.5□□□□□ -0.73
SMG6-202ENST00000354901 GOLGA6CA6NDK9 693 aa10.5□□□□□ -0.73
SMG6-202ENST00000354901 ENO4A6NNW6 628 aa10.5□□□□□ -0.73
SMG6-202ENST00000354901 PES1O00541 588 aaKnown RBP10.5□□□□□ -0.73
SMG6-202ENST00000354901 KIF5CO60282 957 aa10.5□□□□□ -0.73
SMG6-202ENST00000354901 GOLGA6DP0CG33 693 aa10.5□□□□□ -0.73
SMG6-202ENST00000354901 PTGDRQ13258 359 aa10.5□□□□□ -0.73
SMG6-202ENST00000354901 CAVIN4Q5BKX8 364 aa10.5□□□□□ -0.73
SMG6-202ENST00000354901 NOA1Q8NC60 698 aaKnown RBP10.5□□□□□ -0.73
SMG6-202ENST00000354901 CELF1Q92879 486 aaKnown RBP10.5□□□□□ -0.73
SMG6-202ENST00000354901 TRIM6Q9C030 488 aaPredicted RBP10.5□□□□□ -0.73
SMG6-202ENST00000354901 GOLGA6AQ9NYA3 693 aa10.5□□□□□ -0.73
SMG6-202ENST00000354901 SH3BP1Q9Y3L3 701 aa10.5□□□□□ -0.73
SMG6-202ENST00000354901 COL5A3P25940 1745 aaPredicted RBP10.5□□□□□ -0.73
SMG6-202ENST00000354901 ADAMTS3O15072 1205 aa10.49□□□□□ -0.73
SMG6-202ENST00000354901 NLRP5P59047 1200 aa10.49□□□□□ -0.73
SMG6-202ENST00000354901 ENOX1Q8TC92 643 aaKnown RBP10.49□□□□□ -0.73
SMG6-202ENST00000354901 PLIN2Q99541 437 aa10.49□□□□□ -0.73
SMG6-202ENST00000354901 RNF26Q9BY78 433 aaPredicted RBP10.49□□□□□ -0.73
SMG6-202ENST00000354901 KCND1Q9NSA2 647 aa10.49□□□□□ -0.73
SMG6-202ENST00000354901 MARCH10Q8NA82 808 aaPredicted RBP10.49□□□□□ -0.73
SMG6-202ENST00000354901 RASGRP4Q8TDF6 673 aa10.49□□□□□ -0.73
SMG6-202ENST00000354901 EEF2KMTQ96G04 330 aa10.49□□□□□ -0.73
SMG6-202ENST00000354901 CTNND2Q9UQB3 1225 aa10.49□□□□□ -0.73
SMG6-202ENST00000354901 AP1G2O75843 785 aa10.49□□□□□ -0.73
SMG6-202ENST00000354901 CPP00450 1065 aa10.49□□□□□ -0.73
SMG6-202ENST00000354901 ZNF18P17022 549 aa10.49□□□□□ -0.73
SMG6-202ENST00000354901 CDC25CP30307 473 aa10.49□□□□□ -0.73
SMG6-202ENST00000354901 PLCD1P51178 756 aa10.49□□□□□ -0.73
SMG6-202ENST00000354901 PARP10Q53GL7 1025 aa10.49□□□□□ -0.73
SMG6-202ENST00000354901 TTC38Q5R3I4 469 aa10.49□□□□□ -0.73
SMG6-202ENST00000354901 CEP85LQ5SZL2 805 aa10.49□□□□□ -0.73
SMG6-202ENST00000354901 PPFIBP1Q86W92 1011 aa10.49□□□□□ -0.73
SMG6-202ENST00000354901 RASSF8Q8NHQ8 419 aa10.49□□□□□ -0.73
SMG6-202ENST00000354901 PAGE5Q96GU1 130 aa10.49□□□□□ -0.73
SMG6-202ENST00000354901 RIOK1Q9BRS2 568 aaKnown RBP10.49□□□□□ -0.73
SMG6-202ENST00000354901 SYNRGQ9UMZ2 1314 aa10.49□□□□□ -0.73
SMG6-202ENST00000354901 PRDX5P30044 214 aa10.48□□□□□ -0.73
SMG6-202ENST00000354901 GGCXP38435 758 aa10.48□□□□□ -0.73
SMG6-202ENST00000354901 SARSP49591 514 aaKnown RBP10.48□□□□□ -0.73
SMG6-202ENST00000354901 CCNHP51946 323 aaPredicted RBP10.48□□□□□ -0.73
SMG6-202ENST00000354901 RBL2Q08999 1139 aa10.48□□□□□ -0.73
SMG6-202ENST00000354901 PDCLQ13371 301 aa10.48□□□□□ -0.73
SMG6-202ENST00000354901 SLC51AQ86UW1 340 aa10.48□□□□□ -0.73
SMG6-202ENST00000354901 CERKQ8TCT0 537 aa10.48□□□□□ -0.73
SMG6-202ENST00000354901 ZNF384Q8TF68 577 aa10.48□□□□□ -0.73
SMG6-202ENST00000354901 GPKOWQ92917 476 aaPredicted RBP eCLIP10.48□□□□□ -0.73
SMG6-202ENST00000354901 ZKSCAN4Q969J2 545 aaPredicted RBP10.48□□□□□ -0.73
SMG6-202ENST00000354901 NGLY1Q96IV0 654 aa10.48□□□□□ -0.73
SMG6-202ENST00000354901 VPS16Q9H269 839 aa10.48□□□□□ -0.73
SMG6-202ENST00000354901 CPSF2Q9P2I0 782 aaKnown RBP10.48□□□□□ -0.73
SMG6-202ENST00000354901 RTL9Q8NET4 1388 aa10.48□□□□□ -0.73
SMG6-202ENST00000354901 NHSQ6T4R5 1651 aa10.48□□□□□ -0.73
SMG6-202ENST00000354901 BAZ2AQ9UIF9 1905 aaKnown RBP10.48□□□□□ -0.73
SMG6-202ENST00000354901 TSPY2A6NKD2 308 aa10.48□□□□□ -0.73
SMG6-202ENST00000354901 TUBB4AP04350 444 aa10.48□□□□□ -0.73
SMG6-202ENST00000354901 MYBL1P10243 752 aa10.48□□□□□ -0.73
SMG6-202ENST00000354901 STIM1Q13586 685 aa10.48□□□□□ -0.73
SMG6-202ENST00000354901 RRAGBQ5VZM2 374 aa10.48□□□□□ -0.73
SMG6-202ENST00000354901 POTEDQ86YR6 584 aa10.48□□□□□ -0.73
SMG6-202ENST00000354901 SRBD1Q8N5C6 995 aaKnown RBP10.48□□□□□ -0.73
SMG6-202ENST00000354901 ZNF513Q8N8E2 541 aaPredicted RBP10.48□□□□□ -0.73
SMG6-202ENST00000354901 FAM84BQ96KN1 310 aaPredicted RBP10.48□□□□□ -0.73
SMG6-202ENST00000354901 TAF1P21675 1872 aa10.48□□□□□ -0.73
SMG6-202ENST00000354901 KCNJ6P48051 423 aa10.48□□□□□ -0.73
SMG6-202ENST00000354901 AP1ARQ63HQ0 302 aa10.48□□□□□ -0.73
SMG6-202ENST00000354901 KCTD16Q68DU8 428 aa10.48□□□□□ -0.73
SMG6-202ENST00000354901 KANK3Q6NY19 840 aa10.48□□□□□ -0.73
SMG6-202ENST00000354901 SLC35F6Q8N357 371 aa10.48□□□□□ -0.73
SMG6-202ENST00000354901 CEP112Q8N8E3 955 aa10.48□□□□□ -0.73
SMG6-202ENST00000354901 CEP120Q8N960 986 aa10.48□□□□□ -0.73
SMG6-202ENST00000354901 GBP3Q9H0R5 595 aa10.48□□□□□ -0.73
SMG6-202ENST00000354901 RBM28Q9NW13 759 aaKnown RBP10.48□□□□□ -0.73
SMG6-202ENST00000354901 CHD4Q14839 1912 aa10.47□□□□□ -0.73
SMG6-202ENST00000354901 EME2A4GXA9 379 aaPredicted RBP10.47□□□□□ -0.73
SMG6-202ENST00000354901 AKR1B15C9JRZ8 316 aaPredicted RBP10.47□□□□□ -0.73
SMG6-202ENST00000354901 RBM5P52756 815 aaKnown RBP eCLIP10.47□□□□□ -0.73
SMG6-202ENST00000354901 TROAPQ12815 778 aa10.47□□□□□ -0.73
SMG6-202ENST00000354901 DPYDQ12882 1025 aa10.47□□□□□ -0.73
SMG6-202ENST00000354901 TBX2Q13207 712 aaPredicted RBP10.47□□□□□ -0.73
SMG6-202ENST00000354901 CAGE1Q8TC20 777 aa10.47□□□□□ -0.73
SMG6-202ENST00000354901 TBC1D31Q96DN5 1066 aa10.47□□□□□ -0.73
SMG6-202ENST00000354901 ZBTB10Q96DT7 871 aa10.47□□□□□ -0.73
SMG6-202ENST00000354901 PHF20Q9BVI0 1012 aa10.47□□□□□ -0.73
SMG6-202ENST00000354901 KIF9Q9HAQ2 790 aa10.47□□□□□ -0.73
SMG6-202ENST00000354901 MINPP1Q9UNW1 487 aa10.47□□□□□ -0.73
SMG6-202ENST00000354901 ECM29Q5VYK3 1845 aa10.47□□□□□ -0.73
SMG6-202ENST00000354901 BCORQ6W2J9 1755 aa10.47□□□□□ -0.73
SMG6-202ENST00000354901 ENC1O14682 589 aa10.47□□□□□ -0.73
SMG6-202ENST00000354901 STX10O60499 249 aa10.47□□□□□ -0.73
SMG6-202ENST00000354901 CAND2O75155 1236 aa10.47□□□□□ -0.73
SMG6-202ENST00000354901 PDHBP11177 359 aa10.47□□□□□ -0.73
SMG6-202ENST00000354901 CASP14P31944 242 aa10.47□□□□□ -0.73
SMG6-202ENST00000354901 NAP1L1P55209 391 aaKnown RBP10.47□□□□□ -0.73
SMG6-202ENST00000354901 MECOMQ03112 1051 aa10.47□□□□□ -0.73
SMG6-202ENST00000354901 CAPS2Q9BXY5 557 aa10.47□□□□□ -0.73
SMG6-202ENST00000354901 LAMB2P55268 1798 aa10.47□□□□□ -0.73
SMG6-202ENST00000354901 RPS6KA5O75582 802 aa10.46□□□□□ -0.73
SMG6-202ENST00000354901 IRAK1P51617 712 aa10.46□□□□□ -0.73
SMG6-202ENST00000354901 FUT2Q10981 343 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms