RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 A0A0U1RQG5 324 aaPredicted RBP4.19□□□□□ -1.74
RNF38-203ENST00000353739 EFCAB8A8MWE9 144 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 GNA14O95837 355 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 GYS1P13807 737 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 AFMP43652 599 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 FXR2P51116 673 aaKnown RBP eCLIP4.19□□□□□ -1.74
RNF38-203ENST00000353739 MRPL12P52815 198 aaKnown RBP4.19□□□□□ -1.74
RNF38-203ENST00000353739 ETF1P62495 437 aaKnown RBP4.19□□□□□ -1.74
RNF38-203ENST00000353739 KRT83P78385 493 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 PDIA5Q14554 519 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 SV2BQ7L1I2 683 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 MPNDQ8N594 471 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 IGSF22Q8N9C0 903 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 TEKT1Q969V4 418 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 MASTLQ96GX5 879 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 RIC8AQ9NPQ8 531 aa4.19□□□□□ -1.74
RNF38-203ENST00000353739 CDK5RAP2Q96SN8 1893 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 BAZ2AQ9UIF9 1905 aaKnown RBP4.18□□□□□ -1.74
RNF38-203ENST00000353739 CYP2D7A0A087X1C5 515 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 PNMA6FA0A0J9YX94 578 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 PVALEFA0A1B0GWK0 134 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 SMCO2A6NFE2 343 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 KCNJ18B7U540 433 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 PPP1R3GB7ZBB8 358 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 C6orf229H3BNL8 230 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 RHOBTB3O94955 611 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 CYP2D6P10635 497 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 GPS2Q13227 327 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 AP3B2Q13367 1082 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 KCNJ12Q14500 433 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 MOXD1Q6UVY6 613 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 KRT27Q7Z3Y8 459 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 MAPKAPK5Q8IW41 473 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 SLFN12Q8IYM2 578 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 ZNF384Q8TF68 577 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 ZC3H12CQ9C0D7 883 aaKnown RBP4.18□□□□□ -1.74
RNF38-203ENST00000353739 NUCKS1Q9H1E3 243 aaKnown RBP4.18□□□□□ -1.74
RNF38-203ENST00000353739 ACBD3Q9H3P7 528 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 LUC7LQ9NQ29 371 aaKnown RBP4.18□□□□□ -1.74
RNF38-203ENST00000353739 DAAM1Q9Y4D1 1078 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 MYH1P12882 1939 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 A0A1W2PQJ5 194 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 M0R2N6 131 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 SNAP23O00161 211 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 POLRMTO00411 1230 aaKnown RBP4.18□□□□□ -1.74
RNF38-203ENST00000353739 MFAP3LO75121 409 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 FECHP22830 423 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 KLRK1P26718 216 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 DNM2P50570 870 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 COPB1P53618 953 aaKnown RBP4.18□□□□□ -1.74
RNF38-203ENST00000353739 TCP11X2Q5H9J9 407 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 CCDC70Q6NSX1 233 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 DPP8Q6V1X1 898 aaPredicted RBP4.18□□□□□ -1.74
RNF38-203ENST00000353739 C17orf53Q8N3J3 647 aaPredicted RBP4.18□□□□□ -1.74
RNF38-203ENST00000353739 ERMNQ8TAM6 284 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 RUBCNQ92622 972 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 ERCC4Q92889 916 aaPredicted RBP4.18□□□□□ -1.74
RNF38-203ENST00000353739 RIOX1Q9H6W3 641 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 STX8Q9UNK0 236 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 N4BP3O15049 544 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 CCNT1O60563 726 aaKnown RBP4.18□□□□□ -1.74
RNF38-203ENST00000353739 ERLIN1O75477 346 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 CYLC1P35663 651 aaPredicted RBP4.18□□□□□ -1.74
RNF38-203ENST00000353739 RBM10P98175 930 aaKnown RBP4.18□□□□□ -1.74
RNF38-203ENST00000353739 CALCRLQ16602 461 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 KRT79Q5XKE5 535 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 E4F1Q66K89 784 aaPredicted RBP4.18□□□□□ -1.74
RNF38-203ENST00000353739 ZNF772Q68DY9 489 aaPredicted RBP4.18□□□□□ -1.74
RNF38-203ENST00000353739 ZNF662Q6ZS27 426 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 PODNQ7Z5L7 613 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 FMNL3Q8IVF7 1028 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 CMTR1Q8N1G2 835 aaKnown RBP4.18□□□□□ -1.74
RNF38-203ENST00000353739 C4orf32Q8N8J7 132 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 GOLGA1Q92805 767 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 IL17RBQ9NRM6 502 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 SAP30BPQ9UHR5 308 aaKnown RBP4.18□□□□□ -1.74
RNF38-203ENST00000353739 PNMA2Q9UL42 364 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.18□□□□□ -1.74
RNF38-203ENST00000353739 MARCH6O60337 910 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 CKAP4Q07065 602 aaKnown RBP4.18□□□□□ -1.74
RNF38-203ENST00000353739 BMS1Q14692 1282 aaKnown RBP4.18□□□□□ -1.74
RNF38-203ENST00000353739 NPY5RQ15761 445 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 WHAMMP3Q1A5X7 153 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 HAUS3Q68CZ6 603 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 PPP4R3AQ6IN85 833 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 PROM2Q8N271 834 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 UBE2Q2Q8WVN8 375 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 UBXN4Q92575 508 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 EPSTI1Q96J88 318 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 RPGRIP1Q96KN7 1286 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 TRIM47Q96LD4 638 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 NUP88Q99567 741 aaPredicted RBP4.18□□□□□ -1.74
RNF38-203ENST00000353739 VPS33BQ9H267 617 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 HSD3B7Q9H2F3 369 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 ADD3Q9UEY8 706 aaKnown RBP4.18□□□□□ -1.74
RNF38-203ENST00000353739 RABGAP1Q9Y3P9 1069 aa4.18□□□□□ -1.74
RNF38-203ENST00000353739 IGKV6D-41A0A0C4DH26 115 aa4.17□□□□□ -1.74
RNF38-203ENST00000353739 LRRC10BA6NIK2 292 aa4.17□□□□□ -1.74
RNF38-203ENST00000353739 FOSP01100 380 aaPredicted RBP4.17□□□□□ -1.74
RNF38-203ENST00000353739 SNHG28P0DPA3 235 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms