RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 COA7Q96BR5 231 aa21.96■■□□□ 1.11
CHMP4A-201ENST00000347519 P2RX7Q99572 595 aaKnown RBP21.96■■□□□ 1.11
CHMP4A-201ENST00000347519 TESPA1A2RU30 521 aaPredicted RBP21.95■■□□□ 1.1
CHMP4A-201ENST00000347519 SPDYE16A6NNV3 312 aaPredicted RBP21.95■■□□□ 1.1
CHMP4A-201ENST00000347519 STXBP3O00186 592 aa21.95■■□□□ 1.1
CHMP4A-201ENST00000347519 ADAMTS3O15072 1205 aa21.95■■□□□ 1.1
CHMP4A-201ENST00000347519 PEX10O60683 326 aa21.95■■□□□ 1.1
CHMP4A-201ENST00000347519 HEATR3Q7Z4Q2 680 aa21.95■■□□□ 1.1
CHMP4A-201ENST00000347519 FAM43AQ8N2R8 423 aa21.95■■□□□ 1.1
CHMP4A-201ENST00000347519 REPS2Q8NFH8 660 aa21.95■■□□□ 1.1
CHMP4A-201ENST00000347519 ASCC2Q9H1I8 757 aaPredicted RBP21.95■■□□□ 1.1
CHMP4A-201ENST00000347519 RBM27Q9P2N5 1060 aaKnown RBP21.95■■□□□ 1.1
CHMP4A-201ENST00000347519 SEC63Q9UGP8 760 aaKnown RBP21.95■■□□□ 1.1
CHMP4A-201ENST00000347519 ADAMTS5Q9UNA0 930 aa21.95■■□□□ 1.1
CHMP4A-201ENST00000347519 KCNJ14Q9UNX9 436 aa21.95■■□□□ 1.1
CHMP4A-201ENST00000347519 ZDHHC9Q9Y397 364 aa21.95■■□□□ 1.1
CHMP4A-201ENST00000347519 ZNF536O15090 1300 aa21.94■■□□□ 1.1
CHMP4A-201ENST00000347519 WASF1Q92558 559 aa21.94■■□□□ 1.1
CHMP4A-201ENST00000347519 CCDC102AQ96A19 550 aa21.94■■□□□ 1.1
CHMP4A-201ENST00000347519 C8orf76Q96K31 380 aa21.94■■□□□ 1.1
CHMP4A-201ENST00000347519 SLC38A10Q9HBR0 1119 aa21.94■■□□□ 1.1
CHMP4A-201ENST00000347519 MTMR6Q9Y217 621 aa21.94■■□□□ 1.1
CHMP4A-201ENST00000347519 RASSF10A6NK89 507 aa21.93■■□□□ 1.1
CHMP4A-201ENST00000347519 VWA5AO00534 786 aa21.93■■□□□ 1.1
CHMP4A-201ENST00000347519 GRM1Q13255 1194 aa21.93■■□□□ 1.1
CHMP4A-201ENST00000347519 KRT40Q6A162 431 aa21.93■■□□□ 1.1
CHMP4A-201ENST00000347519 PAXIP1Q6ZW49 1069 aaPredicted RBP21.93■■□□□ 1.1
CHMP4A-201ENST00000347519 ANKRD23Q86SG2 305 aa21.93■■□□□ 1.1
CHMP4A-201ENST00000347519 BARHL2Q9NY43 387 aa21.93■■□□□ 1.1
CHMP4A-201ENST00000347519 MANSC4A6NHS7 340 aaPredicted RBP21.92■■□□□ 1.1
CHMP4A-201ENST00000347519 PDHXO00330 501 aa21.92■■□□□ 1.1
CHMP4A-201ENST00000347519 IGF2BP3O00425 579 aaKnown RBP eCLIP21.92■■□□□ 1.1
CHMP4A-201ENST00000347519 STX6O43752 255 aa21.92■■□□□ 1.1
CHMP4A-201ENST00000347519 IRX3P78415 501 aaPredicted RBP21.92■■□□□ 1.1
CHMP4A-201ENST00000347519 DEFB115Q30KQ5 88 aa21.92■■□□□ 1.1
CHMP4A-201ENST00000347519 FBXO18Q8NFZ0 1043 aa21.92■■□□□ 1.1
CHMP4A-201ENST00000347519 AGBL1Q96MI9 1066 aa21.92■■□□□ 1.1
CHMP4A-201ENST00000347519 RAVER2Q9HCJ3 691 aaKnown RBP21.92■■□□□ 1.1
CHMP4A-201ENST00000347519 KIF3AQ9Y496 699 aa21.92■■□□□ 1.1
CHMP4A-201ENST00000347519 MYPNQ86TC9 1320 aa21.91■■□□□ 1.1
CHMP4A-201ENST00000347519 VPS37CA5D8V6 355 aaPredicted RBP21.91■■□□□ 1.1
CHMP4A-201ENST00000347519 CYP2C8P10632 490 aa21.91■■□□□ 1.1
CHMP4A-201ENST00000347519 NPY5RQ15761 445 aa21.91■■□□□ 1.1
CHMP4A-201ENST00000347519 FOXD4L5Q5VV16 416 aaPredicted RBP21.91■■□□□ 1.1
CHMP4A-201ENST00000347519 FBXO11Q86XK2 927 aa21.91■■□□□ 1.1
CHMP4A-201ENST00000347519 FOXD4L4Q8WXT5 416 aaPredicted RBP21.91■■□□□ 1.1
CHMP4A-201ENST00000347519 HOXC10Q9NYD6 342 aa21.91■■□□□ 1.1
CHMP4A-201ENST00000347519 AOC2O75106 756 aa21.9■■□□□ 1.1
CHMP4A-201ENST00000347519 ZBED4O75132 1171 aa21.9■■□□□ 1.1
CHMP4A-201ENST00000347519 CNMDO75829 334 aa21.9■■□□□ 1.1
CHMP4A-201ENST00000347519 PDCP20941 246 aa21.9■■□□□ 1.1
CHMP4A-201ENST00000347519 OSBPP22059 807 aa21.9■■□□□ 1.1
CHMP4A-201ENST00000347519 HERVK_113P62684 666 aa21.9■■□□□ 1.1
CHMP4A-201ENST00000347519 KIF23Q02241 960 aaPredicted RBP21.9■■□□□ 1.1
CHMP4A-201ENST00000347519 PABPC4Q13310 644 aaKnown RBP eCLIP21.9■■□□□ 1.12e-6■■■□□ 18.3
CHMP4A-201ENST00000347519 TMEM132BQ14DG7 1078 aa21.9■■□□□ 1.1
CHMP4A-201ENST00000347519 USH1GQ495M9 461 aa21.9■■□□□ 1.1
CHMP4A-201ENST00000347519 CPXCR1Q8N123 301 aa21.9■■□□□ 1.1
CHMP4A-201ENST00000347519 CAPNS2Q96L46 248 aa21.9■■□□□ 1.1
CHMP4A-201ENST00000347519 PHF20Q9BVI0 1012 aa21.9■■□□□ 1.1
CHMP4A-201ENST00000347519 AMNQ9BXJ7 453 aa21.9■■□□□ 1.1
CHMP4A-201ENST00000347519 BTBD7Q9P203 1132 aa21.9■■□□□ 1.1
CHMP4A-201ENST00000347519 BRD1O95696 1058 aa21.89■■□□□ 1.1
CHMP4A-201ENST00000347519 NAPAP54920 295 aa21.89■■□□□ 1.1
CHMP4A-201ENST00000347519 ZNF214Q9UL59 606 aaPredicted RBP21.89■■□□□ 1.1
CHMP4A-201ENST00000347519 CIZ1Q9ULV3 898 aaPredicted RBP21.89■■□□□ 1.1
CHMP4A-201ENST00000347519 SLC45A1Q9Y2W3 748 aa21.89■■□□□ 1.1
CHMP4A-201ENST00000347519 PCDHA1Q9Y5I3 950 aa21.89■■□□□ 1.1
CHMP4A-201ENST00000347519 H3BQV1 296 aa21.88■■□□□ 1.09
CHMP4A-201ENST00000347519 ICAM1P05362 532 aa21.88■■□□□ 1.09
CHMP4A-201ENST00000347519 LBX2Q6XYB7 198 aa21.88■■□□□ 1.09
CHMP4A-201ENST00000347519 OXER1Q8TDS5 423 aa21.88■■□□□ 1.09
CHMP4A-201ENST00000347519 TXNRD2Q9NNW7 524 aa21.88■■□□□ 1.09
CHMP4A-201ENST00000347519 SH3GLB2Q9NR46 395 aa21.88■■□□□ 1.09
CHMP4A-201ENST00000347519 CHMP5Q9NZZ3 219 aa21.88■■□□□ 1.09
CHMP4A-201ENST00000347519 KIF28PB7ZC32 967 aa21.87■■□□□ 1.09
CHMP4A-201ENST00000347519 OPLAHO14841 1288 aa21.87■■□□□ 1.09
CHMP4A-201ENST00000347519 MMP1P03956 469 aa21.87■■□□□ 1.09
CHMP4A-201ENST00000347519 FDX1P10109 184 aa21.87■■□□□ 1.09
CHMP4A-201ENST00000347519 NLRP5P59047 1200 aa21.87■■□□□ 1.09
CHMP4A-201ENST00000347519 TRIM29Q14134 588 aa21.87■■□□□ 1.09
CHMP4A-201ENST00000347519 RBPJLQ9UBG7 517 aa21.87■■□□□ 1.09
CHMP4A-201ENST00000347519 CCPG1Q9ULG6 757 aa21.87■■□□□ 1.09
CHMP4A-201ENST00000347519 RIPK3Q9Y572 518 aa21.87■■□□□ 1.09
CHMP4A-201ENST00000347519 SMCO2A6NFE2 343 aa21.87■■□□□ 1.09
CHMP4A-201ENST00000347519 hCG_1984214I3L0E3 225 aa21.87■■□□□ 1.09
CHMP4A-201ENST00000347519 ZSCAN22P10073 491 aaPredicted RBP21.87■■□□□ 1.09
CHMP4A-201ENST00000347519 FERMT3Q86UX7 667 aa21.87■■□□□ 1.09
CHMP4A-201ENST00000347519 IFNL1Q8IU54 200 aa21.87■■□□□ 1.09
CHMP4A-201ENST00000347519 ZNF713Q8N859 430 aaPredicted RBP21.87■■□□□ 1.09
CHMP4A-201ENST00000347519 PAGR1Q9BTK6 254 aa21.87■■□□□ 1.09
CHMP4A-201ENST00000347519 PNMA3Q9UL41 463 aa21.87■■□□□ 1.09
CHMP4A-201ENST00000347519 CTDP1Q9Y5B0 961 aaPredicted RBP21.87■■□□□ 1.09
CHMP4A-201ENST00000347519 XBP1P17861 261 aa21.86■■□□□ 1.09
CHMP4A-201ENST00000347519 TM4SF4P48230 202 aa21.86■■□□□ 1.09
CHMP4A-201ENST00000347519 RESTQ13127 1097 aa21.86■■□□□ 1.09
CHMP4A-201ENST00000347519 NOM1Q5C9Z4 860 aaKnown RBP21.86■■□□□ 1.09
CHMP4A-201ENST00000347519 PPP1R18Q6NYC8 613 aa21.86■■□□□ 1.09
CHMP4A-201ENST00000347519 TBC1D5Q92609 795 aa21.86■■□□□ 1.09
CHMP4A-201ENST00000347519 ZMYND12Q9H0C1 365 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms