RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 FEM1BQ9UK73 627 aa12.58□□□□□ -0.4
ECM1-201ENST00000346569 TRIM75PA6NK02 468 aa12.57□□□□□ -0.4
ECM1-201ENST00000346569 PTPREP23469 700 aa12.57□□□□□ -0.4
ECM1-201ENST00000346569 ME1P48163 572 aa12.57□□□□□ -0.4
ECM1-201ENST00000346569 CLK2P49760 499 aaKnown RBP12.57□□□□□ -0.4
ECM1-201ENST00000346569 STAT2P52630 851 aa12.57□□□□□ -0.4
ECM1-201ENST00000346569 MAP3K9P80192 1104 aa12.57□□□□□ -0.4
ECM1-201ENST00000346569 CDC37Q16543 378 aaPredicted RBP12.57□□□□□ -0.4
ECM1-201ENST00000346569 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.57□□□□□ -0.4
ECM1-201ENST00000346569 PIK3AP1Q6ZUJ8 805 aa12.57□□□□□ -0.4
ECM1-201ENST00000346569 BICD2Q8TD16 824 aa12.57□□□□□ -0.4
ECM1-201ENST00000346569 RASGRP4Q8TDF6 673 aa12.57□□□□□ -0.4
ECM1-201ENST00000346569 FAM237AA0A1B0GTK4 181 aa12.56□□□□□ -0.4
ECM1-201ENST00000346569 WDR46O15213 610 aaKnown RBP12.56□□□□□ -0.4
ECM1-201ENST00000346569 EDIL3O43854 480 aa12.56□□□□□ -0.4
ECM1-201ENST00000346569 CMA1P23946 247 aa12.56□□□□□ -0.4
ECM1-201ENST00000346569 MARCKSP29966 332 aaPredicted RBP12.56□□□□□ -0.4
ECM1-201ENST00000346569 USP14P54578 494 aa12.56□□□□□ -0.4
ECM1-201ENST00000346569 BACE1P56817 501 aa12.56□□□□□ -0.4
ECM1-201ENST00000346569 ZNF445P59923 1031 aa12.56□□□□□ -0.4
ECM1-201ENST00000346569 SPP2Q13103 211 aa12.56□□□□□ -0.4
ECM1-201ENST00000346569 SNW1Q13573 536 aaKnown RBP12.56□□□□□ -0.4
ECM1-201ENST00000346569 ZYXQ15942 572 aaKnown RBP12.56□□□□□ -0.4
ECM1-201ENST00000346569 ZSCAN23Q3MJ62 389 aa12.56□□□□□ -0.4
ECM1-201ENST00000346569 KRT25Q7Z3Z0 450 aa12.56□□□□□ -0.4
ECM1-201ENST00000346569 PNMA8AQ86V59 439 aaPredicted RBP12.56□□□□□ -0.4
ECM1-201ENST00000346569 FBXO11Q86XK2 927 aa12.56□□□□□ -0.4
ECM1-201ENST00000346569 CCAR1Q8IX12 1150 aaKnown RBP12.56□□□□□ -0.4
ECM1-201ENST00000346569 C4orf32Q8N8J7 132 aa12.56□□□□□ -0.4
ECM1-201ENST00000346569 JMYQ8N9B5 988 aa12.56□□□□□ -0.4
ECM1-201ENST00000346569 ZNF280CQ8ND82 737 aa12.56□□□□□ -0.4
ECM1-201ENST00000346569 C12orf42Q96LP6 360 aa12.56□□□□□ -0.4
ECM1-201ENST00000346569 AMNQ9BXJ7 453 aa12.56□□□□□ -0.4
ECM1-201ENST00000346569 RANBP17Q9H2T7 1088 aaKnown RBP12.56□□□□□ -0.4
ECM1-201ENST00000346569 GOLPH3LQ9H4A5 285 aa12.56□□□□□ -0.4
ECM1-201ENST00000346569 AS3MTQ9HBK9 375 aa12.56□□□□□ -0.4
ECM1-201ENST00000346569 PICK1Q9NRD5 415 aa12.56□□□□□ -0.4
ECM1-201ENST00000346569 NOL7Q9UMY1 257 aaKnown RBP12.56□□□□□ -0.4
ECM1-201ENST00000346569 AFG3L2Q9Y4W6 797 aa12.56□□□□□ -0.4
ECM1-201ENST00000346569 PCDHA1Q9Y5I3 950 aa12.56□□□□□ -0.4
ECM1-201ENST00000346569 SRPRBQ9Y5M8 271 aaKnown RBP12.56□□□□□ -0.4
ECM1-201ENST00000346569 ZHX2Q9Y6X8 837 aa12.56□□□□□ -0.4
ECM1-201ENST00000346569 C19orf81C9J6K1 198 aa12.55□□□□□ -0.4
ECM1-201ENST00000346569 PPP1R12BO60237 982 aaPredicted RBP12.55□□□□□ -0.4
ECM1-201ENST00000346569 CUTAO60888 179 aa12.55□□□□□ -0.4
ECM1-201ENST00000346569 NR1I2O75469 434 aa12.55□□□□□ -0.4
ECM1-201ENST00000346569 BMP15O95972 392 aa12.55□□□□□ -0.4
ECM1-201ENST00000346569 ATP2B1P20020 1258 aa12.55□□□□□ -0.4
ECM1-201ENST00000346569 MRPL12P52815 198 aaKnown RBP12.55□□□□□ -0.4
ECM1-201ENST00000346569 SNAP25P60880 206 aa12.55□□□□□ -0.4
ECM1-201ENST00000346569 ZNF174Q15697 407 aa12.55□□□□□ -0.4
ECM1-201ENST00000346569 MAP3K11Q16584 847 aa12.55□□□□□ -0.4
ECM1-201ENST00000346569 TPRNQ4KMQ1 711 aa12.55□□□□□ -0.4
ECM1-201ENST00000346569 TTC38Q5R3I4 469 aa12.55□□□□□ -0.4
ECM1-201ENST00000346569 SYAP1Q96A49 352 aaPredicted RBP12.55□□□□□ -0.4
ECM1-201ENST00000346569 GLT8D2Q9H1C3 349 aa12.55□□□□□ -0.4
ECM1-201ENST00000346569 NMRK2Q9NPI5 230 aa12.55□□□□□ -0.4
ECM1-201ENST00000346569 FBXO28Q9NVF7 368 aa12.55□□□□□ -0.4
ECM1-201ENST00000346569 BIN2Q9UBW5 565 aaPredicted RBP12.55□□□□□ -0.4
ECM1-201ENST00000346569 FBXO2Q9UK22 296 aaPredicted RBP12.55□□□□□ -0.4
ECM1-201ENST00000346569 ISY1Q9ULR0 285 aaKnown RBP12.55□□□□□ -0.4
ECM1-201ENST00000346569 CEP131Q9UPN4 1083 aa12.55□□□□□ -0.4
ECM1-201ENST00000346569 SCN4AP35499 1836 aa12.55□□□□□ -0.4
ECM1-201ENST00000346569 CCDC194A0A1B0GVG4 234 aa12.54□□□□□ -0.4
ECM1-201ENST00000346569 ADCY7P51828 1080 aa12.54□□□□□ -0.4
ECM1-201ENST00000346569 IKQ13123 557 aaPredicted RBP12.54□□□□□ -0.4
ECM1-201ENST00000346569 PRKG1Q13976 671 aa12.54□□□□□ -0.4
ECM1-201ENST00000346569 SH3D19Q5HYK7 790 aa12.54□□□□□ -0.4
ECM1-201ENST00000346569 CCDC183Q5T5S1 534 aa12.54□□□□□ -0.4
ECM1-201ENST00000346569 SHC4Q6S5L8 630 aa12.54□□□□□ -0.4
ECM1-201ENST00000346569 REXO1Q8N1G1 1221 aaKnown RBP12.54□□□□□ -0.4
ECM1-201ENST00000346569 ZNF579Q8NAF0 562 aaKnown RBP12.54□□□□□ -0.4
ECM1-201ENST00000346569 PRPF38AQ8NAV1 312 aaKnown RBP12.54□□□□□ -0.4
ECM1-201ENST00000346569 CDCA5Q96FF9 252 aa12.54□□□□□ -0.4
ECM1-201ENST00000346569 CLIC6Q96NY7 704 aa12.54□□□□□ -0.4
ECM1-201ENST00000346569 FEZ1Q99689 392 aa12.54□□□□□ -0.4
ECM1-201ENST00000346569 PSTPIP2Q9H939 334 aa12.54□□□□□ -0.4
ECM1-201ENST00000346569 DDX19AQ9NUU7 478 aaKnown RBP12.54□□□□□ -0.4
ECM1-201ENST00000346569 DACT1Q9NYF0 836 aa12.54□□□□□ -0.4
ECM1-201ENST00000346569 SNCAIPQ9Y6H5 919 aa12.54□□□□□ -0.4
ECM1-201ENST00000346569 ATAD5Q96QE3 1844 aa12.54□□□□□ -0.4
ECM1-201ENST00000346569 WDR90Q96KV7 1748 aa12.54□□□□□ -0.4
ECM1-201ENST00000346569 MEIS2O14770 477 aa12.54□□□□□ -0.4
ECM1-201ENST00000346569 OPLAHO14841 1288 aa12.54□□□□□ -0.4
ECM1-201ENST00000346569 LETM1O95202 739 aaPredicted RBP12.54□□□□□ -0.4
ECM1-201ENST00000346569 HSPA6P17066 643 aa12.54□□□□□ -0.4
ECM1-201ENST00000346569 ATP2C1P98194 919 aaPredicted RBP12.54□□□□□ -0.4
ECM1-201ENST00000346569 GRIN1Q05586 938 aa12.54□□□□□ -0.4
ECM1-201ENST00000346569 TRAF1Q13077 416 aa12.54□□□□□ -0.4
ECM1-201ENST00000346569 DGKZQ13574 1117 aa12.54□□□□□ -0.4
ECM1-201ENST00000346569 MTMR2Q13614 643 aa12.54□□□□□ -0.4
ECM1-201ENST00000346569 NONOQ15233 471 aaKnown RBP eCLIP12.54□□□□□ -0.4
ECM1-201ENST00000346569 INF2Q27J81 1249 aa12.54□□□□□ -0.4
ECM1-201ENST00000346569 EAPPQ56P03 285 aaPredicted RBP12.54□□□□□ -0.4
ECM1-201ENST00000346569 JAKMIP3Q5VZ66 844 aa12.54□□□□□ -0.4
ECM1-201ENST00000346569 RESP18Q5W5W9 173 aa12.54□□□□□ -0.4
ECM1-201ENST00000346569 GAS2L3Q86XJ1 694 aa12.54□□□□□ -0.4
ECM1-201ENST00000346569 TEX2Q8IWB9 1127 aa12.54□□□□□ -0.4
ECM1-201ENST00000346569 FMR1NBQ8N0W7 255 aaPredicted RBP12.54□□□□□ -0.4
ECM1-201ENST00000346569 KRI1Q8N9T8 703 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms