RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 ZNF174Q15697 407 aa24.52■■□□□ 1.52
TSPAN3-202ENST00000346495 CAMK4Q16566 473 aa24.52■■□□□ 1.52
TSPAN3-202ENST00000346495 RESP18Q5W5W9 173 aa24.52■■□□□ 1.52
TSPAN3-202ENST00000346495 SPICE1Q8N0Z3 855 aa24.52■■□□□ 1.52
TSPAN3-202ENST00000346495 REXO1Q8N1G1 1221 aaKnown RBP24.52■■□□□ 1.52
TSPAN3-202ENST00000346495 ZNF579Q8NAF0 562 aaKnown RBP24.52■■□□□ 1.52
TSPAN3-202ENST00000346495 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.52■■□□□ 1.52
TSPAN3-202ENST00000346495 FAM237AA0A1B0GTK4 181 aa24.51■■□□□ 1.51
TSPAN3-202ENST00000346495 PFKFB1P16118 471 aa24.51■■□□□ 1.51
TSPAN3-202ENST00000346495 DPY19L2Q6NUT2 758 aa24.51■■□□□ 1.51
TSPAN3-202ENST00000346495 SHC4Q6S5L8 630 aa24.51■■□□□ 1.51
TSPAN3-202ENST00000346495 RBM43Q6ZSC3 357 aaKnown RBP24.51■■□□□ 1.51
TSPAN3-202ENST00000346495 CLIC6Q96NY7 704 aa24.51■■□□□ 1.51
TSPAN3-202ENST00000346495 RIC8AQ9NPQ8 531 aa24.51■■□□□ 1.51
TSPAN3-202ENST00000346495 ZNF112Q9UJU3 913 aa24.51■■□□□ 1.51
TSPAN3-202ENST00000346495 WNT7AO00755 349 aa24.5■■□□□ 1.51
TSPAN3-202ENST00000346495 STAT2P52630 851 aa24.5■■□□□ 1.51
TSPAN3-202ENST00000346495 NONOQ15233 471 aaKnown RBP eCLIP24.5■■□□□ 1.51
TSPAN3-202ENST00000346495 GPR162Q16538 588 aa24.5■■□□□ 1.51
TSPAN3-202ENST00000346495 KIAA1755Q5JYT7 1200 aa24.5■■□□□ 1.51
TSPAN3-202ENST00000346495 FERMT2Q96AC1 680 aa24.5■■□□□ 1.51
TSPAN3-202ENST00000346495 FEZ1Q99689 392 aa24.5■■□□□ 1.51
TSPAN3-202ENST00000346495 GLT8D2Q9H1C3 349 aa24.5■■□□□ 1.51
TSPAN3-202ENST00000346495 PLA2G6O60733 806 aa24.5■■□□□ 1.51
TSPAN3-202ENST00000346495 ATP2C1P98194 919 aaPredicted RBP24.5■■□□□ 1.51
TSPAN3-202ENST00000346495 FAM83BQ5T0W9 1011 aa24.5■■□□□ 1.51
TSPAN3-202ENST00000346495 CHURC1Q8WUH1 139 aa24.5■■□□□ 1.51
TSPAN3-202ENST00000346495 HPSEQ9Y251 543 aa24.5■■□□□ 1.51
TSPAN3-202ENST00000346495 MRPL12P52815 198 aaKnown RBP24.49■■□□□ 1.51
TSPAN3-202ENST00000346495 PTGDRQ13258 359 aa24.49■■□□□ 1.51
TSPAN3-202ENST00000346495 INF2Q27J81 1249 aa24.49■■□□□ 1.51
TSPAN3-202ENST00000346495 SUPT20HL1Q3ZLR7 823 aa24.49■■□□□ 1.51
TSPAN3-202ENST00000346495 CUL5Q93034 780 aa24.49■■□□□ 1.51
TSPAN3-202ENST00000346495 AMNQ9BXJ7 453 aa24.49■■□□□ 1.51
TSPAN3-202ENST00000346495 PRR12Q9ULL5 1215 aa24.49■■□□□ 1.51
TSPAN3-202ENST00000346495 POLR2AP24928 1970 aaKnown RBP24.49■■□□□ 1.51
TSPAN3-202ENST00000346495 INPP5BP32019 993 aa24.48■■□□□ 1.51
TSPAN3-202ENST00000346495 MCM7P33993 719 aa24.48■■□□□ 1.51
TSPAN3-202ENST00000346495 ZYXQ15942 572 aaKnown RBP24.48■■□□□ 1.51
TSPAN3-202ENST00000346495 FAM160B2Q86V87 743 aa24.48■■□□□ 1.51
TSPAN3-202ENST00000346495 SCYL3Q8IZE3 742 aa24.48■■□□□ 1.51
TSPAN3-202ENST00000346495 FUCA2Q9BTY2 467 aa24.48■■□□□ 1.51
TSPAN3-202ENST00000346495 GLIS2Q9BZE0 524 aaPredicted RBP24.48■■□□□ 1.51
TSPAN3-202ENST00000346495 FAM13BQ9NYF5 915 aa24.48■■□□□ 1.51
TSPAN3-202ENST00000346495 BIN2Q9UBW5 565 aaPredicted RBP24.48■■□□□ 1.51
TSPAN3-202ENST00000346495 PCDHA1Q9Y5I3 950 aa24.48■■□□□ 1.51
TSPAN3-202ENST00000346495 ZC3H4Q9UPT8 1303 aaKnown RBP24.48■■□□□ 1.51
TSPAN3-202ENST00000346495 ZNF202O95125 648 aa24.47■■□□□ 1.51
TSPAN3-202ENST00000346495 CCDC192P0DO97 292 aa24.47■■□□□ 1.51
TSPAN3-202ENST00000346495 SYKP43405 635 aa24.47■■□□□ 1.51
TSPAN3-202ENST00000346495 TRAF1Q13077 416 aa24.47■■□□□ 1.51
TSPAN3-202ENST00000346495 PRAMEF18Q5VWM3 479 aa24.47■■□□□ 1.51
TSPAN3-202ENST00000346495 CCDC84Q86UT8 332 aaPredicted RBP24.47■■□□□ 1.51
TSPAN3-202ENST00000346495 FBXO11Q86XK2 927 aa24.47■■□□□ 1.51
TSPAN3-202ENST00000346495 L3MBTL3Q96JM7 780 aaPredicted RBP24.47■■□□□ 1.51
TSPAN3-202ENST00000346495 KIAA1683Q9H0B3 1180 aa24.47■■□□□ 1.51
TSPAN3-202ENST00000346495 RBSNQ9H1K0 784 aa24.47■■□□□ 1.51
TSPAN3-202ENST00000346495 FEM1BQ9UK73 627 aa24.47■■□□□ 1.51
TSPAN3-202ENST00000346495 GRIN3BO60391 1043 aa24.46■■□□□ 1.51
TSPAN3-202ENST00000346495 JAKMIP3Q5VZ66 844 aa24.46■■□□□ 1.51
TSPAN3-202ENST00000346495 LPAR1Q92633 364 aa24.46■■□□□ 1.51
TSPAN3-202ENST00000346495 DCPSQ96C86 337 aaKnown RBP24.46■■□□□ 1.51
TSPAN3-202ENST00000346495 TIGD1Q96MW7 591 aa24.46■■□□□ 1.51
TSPAN3-202ENST00000346495 PSTPIP2Q9H939 334 aa24.46■■□□□ 1.51
TSPAN3-202ENST00000346495 MRVI1Q9Y6F6 885 aa24.46■■□□□ 1.51
TSPAN3-202ENST00000346495 XRCC6P12956 609 aaKnown RBP eCLIP24.46■■□□□ 1.51
TSPAN3-202ENST00000346495 ARL6IP4Q66PJ3 421 aaKnown RBP24.46■■□□□ 1.51
TSPAN3-202ENST00000346495 NEK8Q86SG6 692 aa24.46■■□□□ 1.51
TSPAN3-202ENST00000346495 CKAP2LQ8IYA6 745 aa24.46■■□□□ 1.51
TSPAN3-202ENST00000346495 WRNIP1Q96S55 665 aa24.46■■□□□ 1.51
TSPAN3-202ENST00000346495 TMEM260Q9NX78 707 aa24.46■■□□□ 1.51
TSPAN3-202ENST00000346495 CLK2P49760 499 aaKnown RBP24.45■■□□□ 1.5
TSPAN3-202ENST00000346495 GRIN1Q05586 938 aa24.45■■□□□ 1.5
TSPAN3-202ENST00000346495 ORC2Q13416 577 aaPredicted RBP24.45■■□□□ 1.5
TSPAN3-202ENST00000346495 SDF4Q9BRK5 362 aa24.45■■□□□ 1.5
TSPAN3-202ENST00000346495 CSRNP2Q9H175 543 aa24.45■■□□□ 1.5
TSPAN3-202ENST00000346495 AS3MTQ9HBK9 375 aa24.45■■□□□ 1.5
TSPAN3-202ENST00000346495 PICK1Q9NRD5 415 aa24.45■■□□□ 1.5
TSPAN3-202ENST00000346495 KCNH3Q9ULD8 1083 aa24.45■■□□□ 1.5
TSPAN3-202ENST00000346495 SSC5DA1L4H1 1573 aa24.44■■□□□ 1.5
TSPAN3-202ENST00000346495 LAD1O00515 517 aa24.44■■□□□ 1.5
TSPAN3-202ENST00000346495 WDR46O15213 610 aaKnown RBP24.44■■□□□ 1.5
TSPAN3-202ENST00000346495 TBCKQ8TEA7 893 aa24.44■■□□□ 1.5
TSPAN3-202ENST00000346495 WDR18Q9BV38 432 aa24.44■■□□□ 1.5
TSPAN3-202ENST00000346495 SNAP25P60880 206 aa24.43■■□□□ 1.5
TSPAN3-202ENST00000346495 MCTP2Q6DN12 878 aa24.43■■□□□ 1.5
TSPAN3-202ENST00000346495 SASS6Q6UVJ0 657 aa24.43■■□□□ 1.5
TSPAN3-202ENST00000346495 USP50Q70EL3 339 aaPredicted RBP24.43■■□□□ 1.5
TSPAN3-202ENST00000346495 SULF1Q8IWU6 871 aa24.43■■□□□ 1.5
TSPAN3-202ENST00000346495 C4orf32Q8N8J7 132 aa24.43■■□□□ 1.5
TSPAN3-202ENST00000346495 KLRG1Q96E93 195 aa24.43■■□□□ 1.5
TSPAN3-202ENST00000346495 USP14P54578 494 aa24.43■■□□□ 1.5
TSPAN3-202ENST00000346495 SPECC1Q5M775 1068 aa24.43■■□□□ 1.5
TSPAN3-202ENST00000346495 RANBP17Q9H2T7 1088 aaKnown RBP24.43■■□□□ 1.5
TSPAN3-202ENST00000346495 TYRO3Q06418 890 aa24.42■■□□□ 1.5
TSPAN3-202ENST00000346495 UBE2SQ16763 222 aa24.42■■□□□ 1.5
TSPAN3-202ENST00000346495 LETM2Q2VYF4 491 aa24.42■■□□□ 1.5
TSPAN3-202ENST00000346495 NOL9Q5SY16 702 aaKnown RBP24.42■■□□□ 1.5
TSPAN3-202ENST00000346495 ZKSCAN4Q969J2 545 aaPredicted RBP24.42■■□□□ 1.5
TSPAN3-202ENST00000346495 KIFC2Q96AC6 838 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms