RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 ADCY8P40145 1251 aa19.83■□□□□ 0.76
SMC4-201ENST00000344722 PDCLQ13371 301 aa19.83■□□□□ 0.76
SMC4-201ENST00000344722 LPIN2Q92539 896 aa19.83■□□□□ 0.76
SMC4-201ENST00000344722 TSC22D3Q99576 134 aa19.83■□□□□ 0.76
SMC4-201ENST00000344722 KIF2CQ99661 725 aa19.83■□□□□ 0.76
SMC4-201ENST00000344722 NHEJ1Q9H9Q4 299 aaPredicted RBP19.83■□□□□ 0.76
SMC4-201ENST00000344722 LGR6Q9HBX8 967 aa19.83■□□□□ 0.76
SMC4-201ENST00000344722 EIF4G3O43432 1585 aaKnown RBP19.83■□□□□ 0.76
SMC4-201ENST00000344722 TTC37Q6PGP7 1564 aa19.83■□□□□ 0.76
SMC4-201ENST00000344722 hCG_1642624A0A1W2PR95 340 aa19.83■□□□□ 0.76
SMC4-201ENST00000344722 PGRMC1O00264 195 aaKnown RBP19.83■□□□□ 0.76
SMC4-201ENST00000344722 SEMA3EO15041 775 aa19.83■□□□□ 0.76
SMC4-201ENST00000344722 SKIP12755 728 aa19.83■□□□□ 0.76
SMC4-201ENST00000344722 ZBED6P86452 979 aa19.83■□□□□ 0.76
SMC4-201ENST00000344722 SEPT2Q15019 361 aa19.83■□□□□ 0.76
SMC4-201ENST00000344722 PBKQ96KB5 322 aa19.83■□□□□ 0.76
SMC4-201ENST00000344722 FAF1Q9UNN5 650 aaPredicted RBP19.83■□□□□ 0.76
SMC4-201ENST00000344722 KDM3AQ9Y4C1 1321 aa19.82■□□□□ 0.76
SMC4-201ENST00000344722 KCNJ6P48051 423 aa19.82■□□□□ 0.76
SMC4-201ENST00000344722 PGBD1Q96JS3 809 aa19.82■□□□□ 0.76
SMC4-201ENST00000344722 TNRQ92752 1358 aa19.82■□□□□ 0.76
SMC4-201ENST00000344722 ZBTB22O15209 634 aa19.82■□□□□ 0.76
SMC4-201ENST00000344722 LDHBP07195 334 aaKnown RBP19.82■□□□□ 0.76
SMC4-201ENST00000344722 PPP1R21Q6ZMI0 780 aa19.82■□□□□ 0.76
SMC4-201ENST00000344722 DZIP3Q86Y13 1208 aaKnown RBP19.82■□□□□ 0.76
SMC4-201ENST00000344722 SPATA5Q8NB90 893 aa19.82■□□□□ 0.76
SMC4-201ENST00000344722 CCDC97Q96F63 343 aaPredicted RBP19.82■□□□□ 0.76
SMC4-201ENST00000344722 CUEDC2Q9H467 287 aa19.82■□□□□ 0.76
SMC4-201ENST00000344722 TADA3O75528 432 aa19.82■□□□□ 0.76
SMC4-201ENST00000344722 ABCB4P21439 1286 aa19.82■□□□□ 0.76
SMC4-201ENST00000344722 PDE1CQ14123 709 aaPredicted RBP19.82■□□□□ 0.76
SMC4-201ENST00000344722 UHMK1Q8TAS1 419 aaKnown RBP19.82■□□□□ 0.76
SMC4-201ENST00000344722 NOVA2Q9UNW9 492 aaKnown RBP19.82■□□□□ 0.76
SMC4-201ENST00000344722 PRDM15P57071 1507 aaPredicted RBP19.82■□□□□ 0.76
SMC4-201ENST00000344722 MBD5Q9P267 1494 aa19.82■□□□□ 0.76
SMC4-201ENST00000344722 SAMD9Q5K651 1589 aa19.82■□□□□ 0.76
SMC4-201ENST00000344722 PPARAQ07869 468 aa19.82■□□□□ 0.76
SMC4-201ENST00000344722 PICALMQ13492 652 aa19.82■□□□□ 0.76
SMC4-201ENST00000344722 CUL1Q13616 776 aa19.82■□□□□ 0.76
SMC4-201ENST00000344722 PTGDRQ13258 359 aa19.81■□□□□ 0.76
SMC4-201ENST00000344722 ZNF589Q86UQ0 364 aaPredicted RBP19.81■□□□□ 0.76
SMC4-201ENST00000344722 FAM89AQ96GI7 184 aa19.81■□□□□ 0.76
SMC4-201ENST00000344722 MOCS3O95396 460 aa19.81■□□□□ 0.76
SMC4-201ENST00000344722 FMNL1O95466 1100 aaPredicted RBP19.81■□□□□ 0.76
SMC4-201ENST00000344722 ZMYM1Q5SVZ6 1142 aa19.81■□□□□ 0.76
SMC4-201ENST00000344722 ARHGEF18Q6ZSZ5 1173 aa19.81■□□□□ 0.76
SMC4-201ENST00000344722 ANKRD2Q9GZV1 360 aa19.81■□□□□ 0.76
SMC4-201ENST00000344722 EXOC7Q9UPT5 735 aa19.81■□□□□ 0.76
SMC4-201ENST00000344722 DAAM1Q9Y4D1 1078 aa19.81■□□□□ 0.76
SMC4-201ENST00000344722 NCKAP5LQ9HCH0 1330 aa19.81■□□□□ 0.76
SMC4-201ENST00000344722 DHX9Q08211 1270 aaKnown RBP19.81■□□□□ 0.76
SMC4-201ENST00000344722 NBPF5PQ86XG9 351 aaPredicted RBP19.81■□□□□ 0.76
SMC4-201ENST00000344722 NLRP3Q96P20 1036 aa19.81■□□□□ 0.76
SMC4-201ENST00000344722 NIP7Q9Y221 180 aaKnown RBP eCLIP19.81■□□□□ 0.761e-7■■■■■ 83.2
SMC4-201ENST00000344722 LOC102724159A0A0B4J2E5 919 aa19.8■□□□□ 0.76
SMC4-201ENST00000344722 PWP2Q15269 919 aaKnown RBP19.8■□□□□ 0.76
SMC4-201ENST00000344722 GSDMBQ8TAX9 411 aa19.8■□□□□ 0.76
SMC4-201ENST00000344722 FNBP1Q96RU3 617 aa19.8■□□□□ 0.76
SMC4-201ENST00000344722 DHX40Q8IX18 779 aaKnown RBP19.8■□□□□ 0.76
SMC4-201ENST00000344722 THAP9Q9H5L6 903 aa19.8■□□□□ 0.76
SMC4-201ENST00000344722 MRPL44Q9H9J2 332 aaKnown RBP19.8■□□□□ 0.76
SMC4-201ENST00000344722 RIC8AQ9NPQ8 531 aa19.8■□□□□ 0.76
SMC4-201ENST00000344722 ATP8A1Q9Y2Q0 1164 aa19.8■□□□□ 0.76
SMC4-201ENST00000344722 EXOC3O60645 756 aa19.8■□□□□ 0.76
SMC4-201ENST00000344722 GCNT3O95395 438 aa19.8■□□□□ 0.76
SMC4-201ENST00000344722 AFAP1L2Q8N4X5 818 aa19.8■□□□□ 0.76
SMC4-201ENST00000344722 TUBB6Q9BUF5 446 aa19.8■□□□□ 0.76
SMC4-201ENST00000344722 PSD3Q9NYI0 1048 aa19.8■□□□□ 0.76
SMC4-201ENST00000344722 ARMCX3Q9UH62 379 aaPredicted RBP19.8■□□□□ 0.76
SMC4-201ENST00000344722 ADAMTS12P58397 1594 aa19.8■□□□□ 0.76
SMC4-201ENST00000344722 TRAPPC10P48553 1259 aa19.8■□□□□ 0.76
SMC4-201ENST00000344722 POLE2P56282 527 aa19.8■□□□□ 0.76
SMC4-201ENST00000344722 BIRC3Q13489 604 aa19.8■□□□□ 0.76
SMC4-201ENST00000344722 MUM1L1Q5H9M0 696 aa19.8■□□□□ 0.76
SMC4-201ENST00000344722 GALNT17Q6IS24 598 aa19.8■□□□□ 0.76
SMC4-201ENST00000344722 ZSCAN10Q96SZ4 725 aaPredicted RBP19.8■□□□□ 0.76
SMC4-201ENST00000344722 ANO9A1A5B4 782 aa19.79■□□□□ 0.76
SMC4-201ENST00000344722 ATF2P15336 505 aa19.79■□□□□ 0.76
SMC4-201ENST00000344722 CHRNA2Q15822 529 aa19.79■□□□□ 0.76
SMC4-201ENST00000344722 ST7Q9NRC1 585 aa19.79■□□□□ 0.76
SMC4-201ENST00000344722 MYL1P05976 194 aa19.79■□□□□ 0.76
SMC4-201ENST00000344722 ARHGAP44Q17R89 818 aa19.79■□□□□ 0.76
SMC4-201ENST00000344722 IFNL3Q8IZI9 196 aa19.79■□□□□ 0.76
SMC4-201ENST00000344722 PCDHA13Q9Y5I0 950 aa19.79■□□□□ 0.76
SMC4-201ENST00000344722 REXO1Q8N1G1 1221 aaKnown RBP19.79■□□□□ 0.76
SMC4-201ENST00000344722 PI4K2BQ8TCG2 481 aa19.79■□□□□ 0.76
SMC4-201ENST00000344722 P2RX5Q93086 422 aa19.79■□□□□ 0.76
SMC4-201ENST00000344722 SLC7A5Q01650 507 aa19.79■□□□□ 0.76
SMC4-201ENST00000344722 PALM2Q8IXS6 379 aa19.79■□□□□ 0.76
SMC4-201ENST00000344722 CMTR1Q8N1G2 835 aaKnown RBP19.79■□□□□ 0.76
SMC4-201ENST00000344722 SUDS3Q9H7L9 328 aaPredicted RBP19.79■□□□□ 0.76
SMC4-201ENST00000344722 OR52Z1P0C646 297 aa19.78■□□□□ 0.76
SMC4-201ENST00000344722 ARL1P40616 181 aaPredicted RBP19.78■□□□□ 0.76
SMC4-201ENST00000344722 SMTNP53814 917 aa19.78■□□□□ 0.76
SMC4-201ENST00000344722 TBC1D1Q86TI0 1168 aaPredicted RBP19.78■□□□□ 0.76
SMC4-201ENST00000344722 SMYD4Q8IYR2 804 aaPredicted RBP19.78■□□□□ 0.76
SMC4-201ENST00000344722 CCDC89Q8N998 374 aa19.78■□□□□ 0.76
SMC4-201ENST00000344722 USTQ9Y2C2 406 aa19.78■□□□□ 0.76
SMC4-201ENST00000344722 CXCR5P32302 372 aa19.78■□□□□ 0.76
SMC4-201ENST00000344722 MAN1A1P33908 653 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms