RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 TRAF5O00463 557 aa4.12□□□□□ -1.75
SYNE2-202ENST00000344113 S100A6P06703 90 aa4.12□□□□□ -1.75
SYNE2-202ENST00000344113 MKRN3Q13064 507 aaKnown RBP4.12□□□□□ -1.75
SYNE2-202ENST00000344113 ALDH1L2Q3SY69 923 aa4.12□□□□□ -1.75
SYNE2-202ENST00000344113 FCRLBQ6BAA4 426 aa4.12□□□□□ -1.75
SYNE2-202ENST00000344113 ARL6IP6Q8N6S5 226 aa4.12□□□□□ -1.75
SYNE2-202ENST00000344113 TRIM15Q9C019 465 aa4.12□□□□□ -1.75
SYNE2-202ENST00000344113 CSRNP2Q9H175 543 aa4.12□□□□□ -1.75
SYNE2-202ENST00000344113 GTF3C4Q9UKN8 822 aa4.12□□□□□ -1.75
SYNE2-202ENST00000344113 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.12□□□□□ -1.75
SYNE2-202ENST00000344113 MAD1L1Q9Y6D9 718 aa4.12□□□□□ -1.75
SYNE2-202ENST00000344113 HCLS1P14317 486 aaPredicted RBP4.12□□□□□ -1.75
SYNE2-202ENST00000344113 XIAPP98170 497 aa4.12□□□□□ -1.75
SYNE2-202ENST00000344113 TRIM22Q8IYM9 498 aa4.12□□□□□ -1.75
SYNE2-202ENST00000344113 CD9P21926 228 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 RNPC3Q96LT9 517 aaKnown RBP4.11□□□□□ -1.75
SYNE2-202ENST00000344113 FADS3Q9Y5Q0 445 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 POU5F1BQ06416 359 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 SCRN1Q12765 414 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 CNGA4Q8IV77 575 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 RMND1Q9NWS8 449 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 ATP6V1HQ9UI12 483 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 PIK3R4Q99570 1358 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 TTKP33981 857 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 IFIH1Q9BYX4 1025 aaKnown RBP4.11□□□□□ -1.75
SYNE2-202ENST00000344113 BRD8Q9H0E9 1235 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 LZTFL1Q9NQ48 299 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 BLOC1S6Q9UL45 172 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.11□□□□□ -1.75
SYNE2-202ENST00000344113 DEAF1O75398 565 aaPredicted RBP4.11□□□□□ -1.75
SYNE2-202ENST00000344113 TCHHL1Q5QJ38 904 aaPredicted RBP4.11□□□□□ -1.75
SYNE2-202ENST00000344113 ANKRD45Q5TZF3 282 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 NYAP1Q6ZVC0 841 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 ARHGEF2Q92974 986 aaKnown RBP4.11□□□□□ -1.75
SYNE2-202ENST00000344113 SF3A3Q12874 501 aaKnown RBP eCLIP4.11□□□□□ -1.75
SYNE2-202ENST00000344113 KRT71Q3SY84 523 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 NR1H4Q96RI1 486 aaPredicted RBP4.11□□□□□ -1.75
SYNE2-202ENST00000344113 PARVAQ9NVD7 372 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 RGL2O15211 777 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 VWA3BQ502W6 1294 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 ECT2Q9H8V3 914 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 CENPBD1B2RD01 187 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 ALDH1L1O75891 902 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 ATP5BP06576 529 aaKnown RBP4.11□□□□□ -1.75
SYNE2-202ENST00000344113 TRMT44Q8IYL2 757 aaKnown RBP4.11□□□□□ -1.75
SYNE2-202ENST00000344113 RETREG1Q9H6L5 497 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 ZMAT5Q9UDW3 170 aaKnown RBP4.11□□□□□ -1.75
SYNE2-202ENST00000344113 SNAPC4Q5SXM2 1469 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 WFS1O76024 890 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 EEF1DP29692 281 aaKnown RBP4.11□□□□□ -1.75
SYNE2-202ENST00000344113 XRCC4Q13426 336 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 ARHGEF6Q15052 776 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 MTRQ99707 1265 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 COMMD8Q9NX08 183 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 ABCC11Q96J66 1382 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 RPS17P08708 135 aaKnown RBP4.11□□□□□ -1.75
SYNE2-202ENST00000344113 ARHGAP4P98171 946 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 TEDDM1Q5T9Z0 273 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 C8orf76Q96K31 380 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 TNFRSF10DQ9UBN6 386 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 POTEFA5A3E0 1075 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 TADA3O75528 432 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 TOM1L1O75674 476 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 DDHD2O94830 711 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 POTEIP0CG38 1075 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 TUFMP49411 452 aaKnown RBP4.11□□□□□ -1.75
SYNE2-202ENST00000344113 MAP3K10Q02779 954 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 GEN1Q17RS7 908 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 POTEEQ6S8J3 1075 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 PDS5BQ9NTI5 1447 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 NEK4P51957 841 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 MRPS15P82914 257 aaKnown RBP4.11□□□□□ -1.75
SYNE2-202ENST00000344113 HDGFL2Q7Z4V5 671 aaPredicted RBP4.11□□□□□ -1.75
SYNE2-202ENST00000344113 ITGB3P05106 788 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 GIMAP1Q8WWP7 306 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 NLRP7Q8WX94 980 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 UBAC1Q9BSL1 405 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 BAIAP2L1Q9UHR4 511 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 FANCEQ9HB96 536 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 FAM169AQ9Y6X4 670 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 DDX42Q86XP3 938 aaKnown RBP eCLIP4.11□□□□□ -1.75
SYNE2-202ENST00000344113 DBNLQ9UJU6 430 aaKnown RBP4.11□□□□□ -1.75
SYNE2-202ENST00000344113 ARHGAP26Q9UNA1 814 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 CAPN7Q9Y6W3 813 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 RBM47A0AV96 593 aaKnown RBP4.11□□□□□ -1.75
SYNE2-202ENST00000344113 TRIM66O15016 1216 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 SYT1P21579 422 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 KMT5BQ4FZB7 885 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 LARP1BQ659C4 914 aaKnown RBP4.11□□□□□ -1.75
SYNE2-202ENST00000344113 MCM10Q7L590 875 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 SRGAP1Q7Z6B7 1085 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 EPS8L2Q9H6S3 715 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 TPP2P29144 1249 aaPredicted RBP4.11□□□□□ -1.75
SYNE2-202ENST00000344113 CUL4AQ13619 759 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 CARNMT1Q8N4J0 409 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 PCDHGA3Q9Y5H0 932 aa4.11□□□□□ -1.75
SYNE2-202ENST00000344113 POTEMA6NI47 508 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 RGS2P41220 211 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 POTEHQ6S545 545 aa4.1□□□□□ -1.75
SYNE2-202ENST00000344113 POTEGQ6S5H5 508 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms