RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 GYPCP04921 128 aa16.79■□□□□ 0.28
VIPAS39-202ENST00000343765 PLCG2P16885 1265 aa16.79■□□□□ 0.28
VIPAS39-202ENST00000343765 KCNJ12Q14500 433 aa16.79■□□□□ 0.28
VIPAS39-202ENST00000343765 SOGA3Q5TF21 947 aa16.79■□□□□ 0.28
VIPAS39-202ENST00000343765 EEF2KMTQ96G04 330 aa16.79■□□□□ 0.28
VIPAS39-202ENST00000343765 PANX2Q96RD6 677 aa16.79■□□□□ 0.28
VIPAS39-202ENST00000343765 MXD3Q9BW11 206 aa16.79■□□□□ 0.28
VIPAS39-202ENST00000343765 SPZ1Q9BXG8 430 aa16.79■□□□□ 0.28
VIPAS39-202ENST00000343765 BIN2Q9UBW5 565 aaPredicted RBP16.79■□□□□ 0.28
VIPAS39-202ENST00000343765 ZBTB22O15209 634 aa16.78■□□□□ 0.28
VIPAS39-202ENST00000343765 ARHGAP29Q52LW3 1261 aa16.78■□□□□ 0.28
VIPAS39-202ENST00000343765 GALNT17Q6IS24 598 aa16.78■□□□□ 0.28
VIPAS39-202ENST00000343765 LZTS2Q9BRK4 669 aa16.78■□□□□ 0.28
VIPAS39-202ENST00000343765 ZMYND12Q9H0C1 365 aa16.78■□□□□ 0.28
VIPAS39-202ENST00000343765 DAGLAQ9Y4D2 1042 aa16.78■□□□□ 0.28
VIPAS39-202ENST00000343765 SPATA31A6Q5VVP1 1343 aa16.78■□□□□ 0.28
VIPAS39-202ENST00000343765 SRCAPQ6ZRS2 3230 aa16.78■□□□□ 0.28
VIPAS39-202ENST00000343765 DDX60LQ5H9U9 1706 aaKnown RBP16.78■□□□□ 0.28
VIPAS39-202ENST00000343765 BBOX1O75936 387 aa16.78■□□□□ 0.28
VIPAS39-202ENST00000343765 COPB1P53618 953 aaKnown RBP16.78■□□□□ 0.28
VIPAS39-202ENST00000343765 PMS1P54277 932 aaKnown RBP16.78■□□□□ 0.28
VIPAS39-202ENST00000343765 NONOQ15233 471 aaKnown RBP eCLIP16.78■□□□□ 0.28
VIPAS39-202ENST00000343765 TCP11X2Q5H9J9 407 aa16.78■□□□□ 0.28
VIPAS39-202ENST00000343765 TMEM260Q9NX78 707 aa16.78■□□□□ 0.28
VIPAS39-202ENST00000343765 CCDC175P0C221 793 aa16.77■□□□□ 0.28
VIPAS39-202ENST00000343765 NT5C2P49902 561 aa16.77■□□□□ 0.28
VIPAS39-202ENST00000343765 TXNRD1Q16881 649 aa16.77■□□□□ 0.28
VIPAS39-202ENST00000343765 ZMYND15Q9H091 742 aa16.77■□□□□ 0.28
VIPAS39-202ENST00000343765 C6orf50Q9HD87 102 aa16.77■□□□□ 0.28
VIPAS39-202ENST00000343765 GOLGA6L9A6NEM1 432 aa16.77■□□□□ 0.28
VIPAS39-202ENST00000343765 TRIM37O94972 964 aa16.77■□□□□ 0.28
VIPAS39-202ENST00000343765 OR52Z1P0C646 297 aa16.77■□□□□ 0.28
VIPAS39-202ENST00000343765 SLURP2P0DP57 97 aa16.77■□□□□ 0.28
VIPAS39-202ENST00000343765 PLCG1P19174 1290 aa16.77■□□□□ 0.28
VIPAS39-202ENST00000343765 CABP7Q86V35 215 aa16.77■□□□□ 0.28
VIPAS39-202ENST00000343765 SLF2Q8IX21 1173 aa16.77■□□□□ 0.28
VIPAS39-202ENST00000343765 ANKRD20A12PQ8NF67 263 aa16.77■□□□□ 0.28
VIPAS39-202ENST00000343765 NUP88Q99567 741 aaPredicted RBP16.77■□□□□ 0.28
VIPAS39-202ENST00000343765 FEZ1Q99689 392 aa16.77■□□□□ 0.28
VIPAS39-202ENST00000343765 LIMA1Q9UHB6 759 aaKnown RBP16.77■□□□□ 0.28
VIPAS39-202ENST00000343765 TPM1P09493 284 aa16.77■□□□□ 0.27
VIPAS39-202ENST00000343765 TECP42680 631 aa16.77■□□□□ 0.27
VIPAS39-202ENST00000343765 KRT25Q7Z3Z0 450 aa16.77■□□□□ 0.27
VIPAS39-202ENST00000343765 CERS3Q8IU89 383 aa16.77■□□□□ 0.27
VIPAS39-202ENST00000343765 TBCKQ8TEA7 893 aa16.77■□□□□ 0.27
VIPAS39-202ENST00000343765 TBC1D22AQ8WUA7 517 aa16.77■□□□□ 0.27
VIPAS39-202ENST00000343765 CCDC12Q8WUD4 166 aaPredicted RBP16.77■□□□□ 0.27
VIPAS39-202ENST00000343765 RNF225M0QZC1 329 aaPredicted RBP16.76■□□□□ 0.27
VIPAS39-202ENST00000343765 POLRMTO00411 1230 aaKnown RBP16.76■□□□□ 0.27
VIPAS39-202ENST00000343765 PPEF1O14829 653 aaPredicted RBP16.76■□□□□ 0.27
VIPAS39-202ENST00000343765 SCNN1DP51172 638 aa16.76■□□□□ 0.27
VIPAS39-202ENST00000343765 UBXN1Q04323 297 aa16.76■□□□□ 0.27
VIPAS39-202ENST00000343765 DPP8Q6V1X1 898 aaPredicted RBP16.76■□□□□ 0.27
VIPAS39-202ENST00000343765 UBXN4Q92575 508 aa16.76■□□□□ 0.27
VIPAS39-202ENST00000343765 COA7Q96BR5 231 aa16.76■□□□□ 0.27
VIPAS39-202ENST00000343765 GPCPD1Q9NPB8 672 aa16.76■□□□□ 0.27
VIPAS39-202ENST00000343765 OGFRQ9NZT2 677 aa16.76■□□□□ 0.27
VIPAS39-202ENST00000343765 DDX41Q9UJV9 622 aaKnown RBP16.76■□□□□ 0.27
VIPAS39-202ENST00000343765 GAKO14976 1311 aa16.76■□□□□ 0.27
VIPAS39-202ENST00000343765 AKR1B1P15121 316 aa16.76■□□□□ 0.27
VIPAS39-202ENST00000343765 GNA11P29992 359 aa16.76■□□□□ 0.27
VIPAS39-202ENST00000343765 DOK7Q18PE1 504 aa16.76■□□□□ 0.27
VIPAS39-202ENST00000343765 NEK8Q86SG6 692 aa16.76■□□□□ 0.27
VIPAS39-202ENST00000343765 ADSSL1Q8N142 457 aa16.76■□□□□ 0.27
VIPAS39-202ENST00000343765 TRIM47Q96LD4 638 aa16.76■□□□□ 0.27
VIPAS39-202ENST00000343765 PODXL2Q9NZ53 605 aa16.76■□□□□ 0.27
VIPAS39-202ENST00000343765 ADGRG1Q9Y653 693 aa16.76■□□□□ 0.27
VIPAS39-202ENST00000343765 IGSF3O75054 1194 aa16.75■□□□□ 0.27
VIPAS39-202ENST00000343765 POTEDQ86YR6 584 aa16.75■□□□□ 0.27
VIPAS39-202ENST00000343765 CNGA4Q8IV77 575 aa16.75■□□□□ 0.27
VIPAS39-202ENST00000343765 ACRBPQ8NEB7 543 aa16.75■□□□□ 0.27
VIPAS39-202ENST00000343765 CCSER1Q9C0I3 900 aa16.75■□□□□ 0.27
VIPAS39-202ENST00000343765 EPC1Q9H2F5 836 aa16.75■□□□□ 0.27
VIPAS39-202ENST00000343765 DDX4Q9NQI0 724 aaKnown RBP16.75■□□□□ 0.27
VIPAS39-202ENST00000343765 CDK5RAP2Q96SN8 1893 aa16.75■□□□□ 0.27
VIPAS39-202ENST00000343765 KLRC4O43908 158 aa16.75■□□□□ 0.27
VIPAS39-202ENST00000343765 PDHBP11177 359 aa16.75■□□□□ 0.27
VIPAS39-202ENST00000343765 ATP2B2Q01814 1243 aa16.75■□□□□ 0.27
VIPAS39-202ENST00000343765 SPAG1Q07617 926 aa16.75■□□□□ 0.27
VIPAS39-202ENST00000343765 SMAP1Q8IYB5 467 aaPredicted RBP16.75■□□□□ 0.27
VIPAS39-202ENST00000343765 REXO1Q8N1G1 1221 aaKnown RBP16.75■□□□□ 0.27
VIPAS39-202ENST00000343765 FAM163AQ96GL9 167 aaPredicted RBP16.75■□□□□ 0.27
VIPAS39-202ENST00000343765 IRF2BP1Q8IU81 584 aa16.74■□□□□ 0.27
VIPAS39-202ENST00000343765 KIFC2Q96AC6 838 aa16.74■□□□□ 0.27
VIPAS39-202ENST00000343765 KBTBD4Q9NVX7 518 aa16.74■□□□□ 0.27
VIPAS39-202ENST00000343765 LAD1O00515 517 aa16.74■□□□□ 0.27
VIPAS39-202ENST00000343765 HOXA10P31260 410 aaPredicted RBP16.74■□□□□ 0.27
VIPAS39-202ENST00000343765 HSPA1LP34931 641 aa16.74■□□□□ 0.27
VIPAS39-202ENST00000343765 TXKP42681 527 aa16.74■□□□□ 0.27
VIPAS39-202ENST00000343765 CERS5Q8N5B7 392 aa16.74■□□□□ 0.27
VIPAS39-202ENST00000343765 NAA15Q9BXJ9 866 aaKnown RBP16.74■□□□□ 0.27
VIPAS39-202ENST00000343765 SRRTQ9BXP5 876 aaKnown RBP16.74■□□□□ 0.27
VIPAS39-202ENST00000343765 TTF2Q9UNY4 1162 aaKnown RBP16.74■□□□□ 0.27
VIPAS39-202ENST00000343765 TADA3O75528 432 aa16.73■□□□□ 0.27
VIPAS39-202ENST00000343765 PRPHP41219 470 aa16.73■□□□□ 0.27
VIPAS39-202ENST00000343765 ERVK-24P63145 666 aa16.73■□□□□ 0.27
VIPAS39-202ENST00000343765 ASIC1P78348 528 aa16.73■□□□□ 0.27
VIPAS39-202ENST00000343765 ABHD10Q9NUJ1 306 aa16.73■□□□□ 0.27
VIPAS39-202ENST00000343765 ZNF446Q9NWS9 450 aa16.73■□□□□ 0.27
VIPAS39-202ENST00000343765 MTMR4Q9NYA4 1195 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms