RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 REXO1Q8N1G1 1221 aaKnown RBP25.54■■□□□ 1.68
PDLIM2-203ENST00000339162 TMEM60Q9H2L4 133 aa25.54■■□□□ 1.68
PDLIM2-203ENST00000339162 NDUFB10O96000 172 aa25.53■■□□□ 1.68
PDLIM2-203ENST00000339162 PRR29P0C7W0 189 aa25.53■■□□□ 1.68
PDLIM2-203ENST00000339162 MDM2Q00987 491 aaPredicted RBP25.53■■□□□ 1.68
PDLIM2-203ENST00000339162 LETM2Q2VYF4 491 aa25.53■■□□□ 1.68
PDLIM2-203ENST00000339162 DCAF4Q8WV16 495 aa25.53■■□□□ 1.68
PDLIM2-203ENST00000339162 RRAGDQ9NQL2 400 aaPredicted RBP25.53■■□□□ 1.68
PDLIM2-203ENST00000339162 PCDHA5Q9Y5H7 936 aa25.53■■□□□ 1.68
PDLIM2-203ENST00000339162 ZBTB5O15062 677 aa25.53■■□□□ 1.68
PDLIM2-203ENST00000339162 CDC25AP30304 524 aa25.53■■□□□ 1.68
PDLIM2-203ENST00000339162 SNAP25P60880 206 aa25.53■■□□□ 1.68
PDLIM2-203ENST00000339162 NONOQ15233 471 aaKnown RBP eCLIP25.53■■□□□ 1.68
PDLIM2-203ENST00000339162 KRT25Q7Z3Z0 450 aa25.53■■□□□ 1.68
PDLIM2-203ENST00000339162 DHX40Q8IX18 779 aaKnown RBP25.53■■□□□ 1.68
PDLIM2-203ENST00000339162 FAM177A1Q8N128 213 aaPredicted RBP25.53■■□□□ 1.68
PDLIM2-203ENST00000339162 TUBE1Q9UJT0 475 aa25.53■■□□□ 1.68
PDLIM2-203ENST00000339162 ACTN4O43707 911 aaKnown RBP25.52■■□□□ 1.68
PDLIM2-203ENST00000339162 NLRP12P59046 1061 aa25.52■■□□□ 1.68
PDLIM2-203ENST00000339162 AOPEPQ8N6M6 819 aa25.52■■□□□ 1.68
PDLIM2-203ENST00000339162 ESYT2A0FGR8 921 aa25.52■■□□□ 1.68
PDLIM2-203ENST00000339162 BECN2A8MW95 431 aa25.52■■□□□ 1.68
PDLIM2-203ENST00000339162 hCG_1984214I3L0E3 225 aa25.52■■□□□ 1.68
PDLIM2-203ENST00000339162 PTMAP06454 111 aaKnown RBP25.52■■□□□ 1.68
PDLIM2-203ENST00000339162 ADCY7P51828 1080 aa25.52■■□□□ 1.68
PDLIM2-203ENST00000339162 FKBP1CQ5VVH2 108 aa25.52■■□□□ 1.68
PDLIM2-203ENST00000339162 SAMD7Q7Z3H4 446 aa25.52■■□□□ 1.68
PDLIM2-203ENST00000339162 ZNF713Q8N859 430 aaPredicted RBP25.52■■□□□ 1.68
PDLIM2-203ENST00000339162 ACER1Q8TDN7 264 aa25.52■■□□□ 1.68
PDLIM2-203ENST00000339162 TBCKQ8TEA7 893 aa25.52■■□□□ 1.68
PDLIM2-203ENST00000339162 GOLGA6L19H0YKK7 550 aa25.51■■□□□ 1.67
PDLIM2-203ENST00000339162 CCNT1O60563 726 aaKnown RBP25.51■■□□□ 1.67
PDLIM2-203ENST00000339162 GMPSP49915 693 aaPredicted RBP25.51■■□□□ 1.67
PDLIM2-203ENST00000339162 IKQ13123 557 aaPredicted RBP25.51■■□□□ 1.67
PDLIM2-203ENST00000339162 POSTNQ15063 836 aa25.51■■□□□ 1.67
PDLIM2-203ENST00000339162 UBE2SQ16763 222 aa25.51■■□□□ 1.67
PDLIM2-203ENST00000339162 QRICH1Q2TAL8 776 aa25.51■■□□□ 1.67
PDLIM2-203ENST00000339162 FAM83AQ86UY5 434 aa25.51■■□□□ 1.67
PDLIM2-203ENST00000339162 GMCL1P1Q8NEA9 526 aa25.51■■□□□ 1.67
PDLIM2-203ENST00000339162 MTMR8Q96EF0 704 aa25.51■■□□□ 1.67
PDLIM2-203ENST00000339162 ASTN2O75129 1339 aaPredicted RBP25.5■■□□□ 1.67
PDLIM2-203ENST00000339162 ESPNB1AK53 854 aa25.5■■□□□ 1.67
PDLIM2-203ENST00000339162 MICALL2Q8IY33 904 aa25.5■■□□□ 1.67
PDLIM2-203ENST00000339162 NAT10Q9H0A0 1025 aaKnown RBP25.5■■□□□ 1.67
PDLIM2-203ENST00000339162 RASA3Q14644 834 aa25.49■■□□□ 1.67
PDLIM2-203ENST00000339162 TBC1D10BQ4KMP7 808 aaPredicted RBP25.49■■□□□ 1.67
PDLIM2-203ENST00000339162 PGAP2Q9UHJ9 254 aa25.49■■□□□ 1.67
PDLIM2-203ENST00000339162 ZBTB21Q9ULJ3 1066 aa25.49■■□□□ 1.67
PDLIM2-203ENST00000339162 TMEM232C9JQI7 657 aa25.49■■□□□ 1.67
PDLIM2-203ENST00000339162 AFMP43652 599 aa25.49■■□□□ 1.67
PDLIM2-203ENST00000339162 CDC37Q16543 378 aaPredicted RBP25.49■■□□□ 1.67
PDLIM2-203ENST00000339162 ARL6IP4Q66PJ3 421 aaKnown RBP25.49■■□□□ 1.67
PDLIM2-203ENST00000339162 NEK8Q86SG6 692 aa25.49■■□□□ 1.67
PDLIM2-203ENST00000339162 CCDC84Q86UT8 332 aaPredicted RBP25.49■■□□□ 1.67
PDLIM2-203ENST00000339162 CASP1P29466 404 aa25.48■■□□□ 1.67
PDLIM2-203ENST00000339162 ZNF280AP59817 542 aaPredicted RBP25.48■■□□□ 1.67
PDLIM2-203ENST00000339162 KIAA1755Q5JYT7 1200 aa25.48■■□□□ 1.67
PDLIM2-203ENST00000339162 FAM43AQ8N2R8 423 aa25.48■■□□□ 1.67
PDLIM2-203ENST00000339162 GMCL1Q96IK5 515 aa25.48■■□□□ 1.67
PDLIM2-203ENST00000339162 TRIM5Q9C035 493 aa25.48■■□□□ 1.67
PDLIM2-203ENST00000339162 HOOK1Q9UJC3 728 aaKnown RBP25.48■■□□□ 1.67
PDLIM2-203ENST00000339162 PP2D1A8MPX8 630 aa25.47■■□□□ 1.67
PDLIM2-203ENST00000339162 FZD9O00144 591 aa25.47■■□□□ 1.67
PDLIM2-203ENST00000339162 BMP3P12645 472 aa25.47■■□□□ 1.67
PDLIM2-203ENST00000339162 ZYXQ15942 572 aaKnown RBP25.47■■□□□ 1.67
PDLIM2-203ENST00000339162 DTHD1Q6ZMT9 781 aa25.47■■□□□ 1.67
PDLIM2-203ENST00000339162 SPC24Q8NBT2 197 aa25.47■■□□□ 1.67
PDLIM2-203ENST00000339162 STAMQ92783 540 aa25.47■■□□□ 1.67
PDLIM2-203ENST00000339162 RIC8AQ9NPQ8 531 aa25.47■■□□□ 1.67
PDLIM2-203ENST00000339162 CNOT7Q9UIV1 285 aaKnown RBP25.47■■□□□ 1.67
PDLIM2-203ENST00000339162 PCDHA1Q9Y5I3 950 aa25.47■■□□□ 1.67
PDLIM2-203ENST00000339162 LTBP3Q9NS15 1303 aa25.47■■□□□ 1.67
PDLIM2-203ENST00000339162 TAL1P17542 331 aaPredicted RBP25.47■■□□□ 1.67
PDLIM2-203ENST00000339162 CCDC39Q9UFE4 941 aa25.47■■□□□ 1.67
PDLIM2-203ENST00000339162 BMP6P22004 513 aa25.46■■□□□ 1.67
PDLIM2-203ENST00000339162 RPS12P25398 132 aaKnown RBP25.46■■□□□ 1.67
PDLIM2-203ENST00000339162 TNNI2P48788 182 aa25.46■■□□□ 1.67
PDLIM2-203ENST00000339162 PSTPIP2Q9H939 334 aa25.46■■□□□ 1.67
PDLIM2-203ENST00000339162 ARHGEF10LQ9HCE6 1279 aa25.46■■□□□ 1.67
PDLIM2-203ENST00000339162 ZNF541Q9H0D2 1346 aa25.46■■□□□ 1.67
PDLIM2-203ENST00000339162 SLFN14P0C7P3 912 aa25.45■■□□□ 1.67
PDLIM2-203ENST00000339162 ELOA2Q8IYF1 753 aaPredicted RBP25.45■■□□□ 1.67
PDLIM2-203ENST00000339162 CUL5Q93034 780 aa25.45■■□□□ 1.67
PDLIM2-203ENST00000339162 GLIS2Q9BZE0 524 aaPredicted RBP25.45■■□□□ 1.67
PDLIM2-203ENST00000339162 TBC1D12O60347 775 aa25.45■■□□□ 1.66
PDLIM2-203ENST00000339162 LONP1P36776 959 aaKnown RBP25.45■■□□□ 1.66
PDLIM2-203ENST00000339162 PPP1R18Q6NYC8 613 aa25.45■■□□□ 1.66
PDLIM2-203ENST00000339162 PAGE5Q96GU1 130 aa25.45■■□□□ 1.66
PDLIM2-203ENST00000339162 MAN1B1Q9UKM7 699 aa25.45■■□□□ 1.66
PDLIM2-203ENST00000339162 USP17L15C9J2P7 530 aa25.44■■□□□ 1.66
PDLIM2-203ENST00000339162 USP17L13C9JLJ4 530 aa25.44■■□□□ 1.66
PDLIM2-203ENST00000339162 USP17L11C9JVI0 530 aa25.44■■□□□ 1.66
PDLIM2-203ENST00000339162 USP17L18D6R9N7 530 aa25.44■■□□□ 1.66
PDLIM2-203ENST00000339162 USP17L22D6RA61 530 aa25.44■■□□□ 1.66
PDLIM2-203ENST00000339162 USP17L17D6RBQ6 530 aa25.44■■□□□ 1.66
PDLIM2-203ENST00000339162 USP17L19D6RCP7 530 aa25.44■■□□□ 1.66
PDLIM2-203ENST00000339162 USP17L20D6RJB6 530 aa25.44■■□□□ 1.66
PDLIM2-203ENST00000339162 EDIL3O43854 480 aa25.44■■□□□ 1.66
PDLIM2-203ENST00000339162 NEMFO60524 1076 aa25.44■■□□□ 1.66
PDLIM2-203ENST00000339162 CAP2P40123 477 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 158.3 ms