RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 M0R2C6 588 aa14.61□□□□□ -0.07
COL2A1-201ENST00000337299 DHX9Q08211 1270 aaKnown RBP14.61□□□□□ -0.07
COL2A1-201ENST00000337299 ST3GAL1Q11201 340 aa14.61□□□□□ -0.07
COL2A1-201ENST00000337299 ASIC2Q16515 512 aa14.61□□□□□ -0.07
COL2A1-201ENST00000337299 SFMBT2Q5VUG0 894 aa14.61□□□□□ -0.07
COL2A1-201ENST00000337299 PI16Q6UXB8 463 aa14.61□□□□□ -0.07
COL2A1-201ENST00000337299 RBM43Q6ZSC3 357 aaKnown RBP14.61□□□□□ -0.07
COL2A1-201ENST00000337299 KRT26Q7Z3Y9 468 aa14.61□□□□□ -0.07
COL2A1-201ENST00000337299 ZNF473Q8WTR7 871 aaKnown RBP14.61□□□□□ -0.07
COL2A1-201ENST00000337299 TEX13AQ9BXU3 409 aaPredicted RBP14.61□□□□□ -0.07
COL2A1-201ENST00000337299 NOP53Q9NZM5 478 aaKnown RBP14.61□□□□□ -0.07
COL2A1-201ENST00000337299 ANKIB1Q9P2G1 1089 aa14.61□□□□□ -0.07
COL2A1-201ENST00000337299 TTC26A0AVF1 554 aa14.6□□□□□ -0.07
COL2A1-201ENST00000337299 TXNDC9O14530 226 aa14.6□□□□□ -0.07
COL2A1-201ENST00000337299 ZNF76P36508 570 aa14.6□□□□□ -0.07
COL2A1-201ENST00000337299 EIF4A3P38919 411 aaKnown RBP14.6□□□□□ -0.07
COL2A1-201ENST00000337299 RESP18Q5W5W9 173 aa14.6□□□□□ -0.07
COL2A1-201ENST00000337299 OSBP2Q969R2 916 aa14.6□□□□□ -0.07
COL2A1-201ENST00000337299 TSKSQ9UJT2 592 aa14.6□□□□□ -0.07
COL2A1-201ENST00000337299 ZNF652Q9Y2D9 606 aa14.6□□□□□ -0.07
COL2A1-201ENST00000337299 ZNF532Q9HCE3 1301 aa14.6□□□□□ -0.07
COL2A1-201ENST00000337299 TRIM49BA6NDI0 452 aa14.6□□□□□ -0.07
COL2A1-201ENST00000337299 HNRNPLLQ8WVV9 542 aaKnown RBP14.6□□□□□ -0.07
COL2A1-201ENST00000337299 AP1M1Q9BXS5 423 aa14.6□□□□□ -0.07
COL2A1-201ENST00000337299 KLHL14Q9P2G3 628 aa14.6□□□□□ -0.07
COL2A1-201ENST00000337299 GMNCA6NCL1 334 aa14.6□□□□□ -0.07
COL2A1-201ENST00000337299 ABCB4P21439 1286 aa14.6□□□□□ -0.07
COL2A1-201ENST00000337299 CCDC93Q567U6 631 aa14.6□□□□□ -0.07
COL2A1-201ENST00000337299 RSRC2Q7L4I2 434 aaKnown RBP14.6□□□□□ -0.07
COL2A1-201ENST00000337299 CALR3Q96L12 384 aaKnown RBP14.6□□□□□ -0.07
COL2A1-201ENST00000337299 CNOT6LQ96LI5 555 aaKnown RBP14.6□□□□□ -0.07
COL2A1-201ENST00000337299 EFCAB6Q5THR3 1501 aa14.59□□□□□ -0.07
COL2A1-201ENST00000337299 MYOM2P54296 1465 aa14.59□□□□□ -0.07
COL2A1-201ENST00000337299 CDC42BPBQ9Y5S2 1711 aa14.59□□□□□ -0.07
COL2A1-201ENST00000337299 TXKP42681 527 aa14.59□□□□□ -0.07
COL2A1-201ENST00000337299 VPS41P49754 854 aa14.59□□□□□ -0.07
COL2A1-201ENST00000337299 ZMYM1Q5SVZ6 1142 aa14.59□□□□□ -0.07
COL2A1-201ENST00000337299 CCDC84Q86UT8 332 aaPredicted RBP14.59□□□□□ -0.07
COL2A1-201ENST00000337299 FNBP4Q8N3X1 1017 aaPredicted RBP14.59□□□□□ -0.07
COL2A1-201ENST00000337299 SLC39A2Q9NP94 309 aa14.59□□□□□ -0.07
COL2A1-201ENST00000337299 CALML3P27482 149 aa14.59□□□□□ -0.07
COL2A1-201ENST00000337299 LSP1P33241 339 aa14.59□□□□□ -0.07
COL2A1-201ENST00000337299 RANBP1P43487 201 aa14.59□□□□□ -0.07
COL2A1-201ENST00000337299 CCNI2Q6ZMN8 369 aaPredicted RBP14.59□□□□□ -0.07
COL2A1-201ENST00000337299 TAOK1Q7L7X3 1001 aa14.59□□□□□ -0.07
COL2A1-201ENST00000337299 ZNF654Q8IZM8 581 aa14.59□□□□□ -0.07
COL2A1-201ENST00000337299 VPS52Q8N1B4 723 aa14.59□□□□□ -0.07
COL2A1-201ENST00000337299 LBHD1Q9BQE6 289 aaPredicted RBP14.59□□□□□ -0.07
COL2A1-201ENST00000337299 SLC52A2Q9HAB3 445 aa14.59□□□□□ -0.07
COL2A1-201ENST00000337299 SLC40A1Q9NP59 571 aa14.59□□□□□ -0.07
COL2A1-201ENST00000337299 ZBTB10Q96DT7 871 aa14.59□□□□□ -0.07
COL2A1-201ENST00000337299 CEP63Q96MT8 703 aa14.59□□□□□ -0.07
COL2A1-201ENST00000337299 TMEM94Q12767 1356 aa14.59□□□□□ -0.07
COL2A1-201ENST00000337299 TOM1O60784 492 aa14.58□□□□□ -0.07
COL2A1-201ENST00000337299 LUC7L3O95232 432 aaKnown RBP14.58□□□□□ -0.07
COL2A1-201ENST00000337299 UQCRFS1P1P0C7P4 283 aa14.58□□□□□ -0.07
COL2A1-201ENST00000337299 MYBL1P10243 752 aa14.58□□□□□ -0.07
COL2A1-201ENST00000337299 CETN2P41208 172 aa14.58□□□□□ -0.07
COL2A1-201ENST00000337299 HDLBPQ00341 1268 aaKnown RBP14.58□□□□□ -0.07
COL2A1-201ENST00000337299 MIPOL1Q8TD10 442 aa14.58□□□□□ -0.07
COL2A1-201ENST00000337299 PAGE5Q96GU1 130 aa14.58□□□□□ -0.07
COL2A1-201ENST00000337299 NIP7Q9Y221 180 aaKnown RBP eCLIP14.58□□□□□ -0.07
COL2A1-201ENST00000337299 HMGB1P1B2RPK0 211 aaPredicted RBP14.58□□□□□ -0.08
COL2A1-201ENST00000337299 GTPBP6O43824 516 aaPredicted RBP14.58□□□□□ -0.08
COL2A1-201ENST00000337299 POLR2FP61218 127 aaKnown RBP14.58□□□□□ -0.08
COL2A1-201ENST00000337299 SV2BQ7L1I2 683 aa14.58□□□□□ -0.08
COL2A1-201ENST00000337299 GSTA5Q7RTV2 222 aa14.58□□□□□ -0.08
COL2A1-201ENST00000337299 DNAJC10Q8IXB1 793 aa14.58□□□□□ -0.08
COL2A1-201ENST00000337299 MLXIPLQ9NP71 852 aa14.58□□□□□ -0.08
COL2A1-201ENST00000337299 ASIC3Q9UHC3 531 aa14.58□□□□□ -0.08
COL2A1-201ENST00000337299 GCFC2P16383 781 aaKnown RBP14.58□□□□□ -0.08
COL2A1-201ENST00000337299 CTNNA2P26232 953 aa14.58□□□□□ -0.08
COL2A1-201ENST00000337299 MAGOHP61326 146 aaKnown RBP14.58□□□□□ -0.08
COL2A1-201ENST00000337299 KRT79Q5XKE5 535 aa14.58□□□□□ -0.08
COL2A1-201ENST00000337299 MAGOHBQ96A72 148 aaKnown RBP14.58□□□□□ -0.08
COL2A1-201ENST00000337299 ARL8AQ96BM9 186 aa14.58□□□□□ -0.08
COL2A1-201ENST00000337299 RRP36Q96EU6 259 aaKnown RBP14.58□□□□□ -0.08
COL2A1-201ENST00000337299 SMC6Q96SB8 1091 aa14.58□□□□□ -0.08
COL2A1-201ENST00000337299 DIAPH2O60879 1101 aa14.58□□□□□ -0.08
COL2A1-201ENST00000337299 DZIP3Q86Y13 1208 aaKnown RBP14.58□□□□□ -0.08
COL2A1-201ENST00000337299 PROCA1Q8NCQ7 364 aaPredicted RBP14.58□□□□□ -0.08
COL2A1-201ENST00000337299 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.58□□□□□ -0.08
COL2A1-201ENST00000337299 RBM5P52756 815 aaKnown RBP eCLIP14.57□□□□□ -0.08
COL2A1-201ENST00000337299 PLTPP55058 493 aa14.57□□□□□ -0.08
COL2A1-201ENST00000337299 PSMD2Q13200 908 aa14.57□□□□□ -0.08
COL2A1-201ENST00000337299 TCP11X2Q5H9J9 407 aa14.57□□□□□ -0.08
COL2A1-201ENST00000337299 CCDC105Q8IYK2 499 aa14.57□□□□□ -0.08
COL2A1-201ENST00000337299 CCDC24Q8N4L8 307 aa14.57□□□□□ -0.08
COL2A1-201ENST00000337299 SPATA4Q8NEY3 305 aa14.57□□□□□ -0.08
COL2A1-201ENST00000337299 LSM14BQ9BX40 385 aaKnown RBP14.57□□□□□ -0.08
COL2A1-201ENST00000337299 VIPAS39Q9H9C1 493 aa14.57□□□□□ -0.08
COL2A1-201ENST00000337299 HOMER3Q9NSC5 361 aa14.57□□□□□ -0.08
COL2A1-201ENST00000337299 IQSEC2Q5JU85 1478 aa14.57□□□□□ -0.08
COL2A1-201ENST00000337299 PFDN1O60925 122 aa14.57□□□□□ -0.08
COL2A1-201ENST00000337299 HOXB7P09629 217 aa14.57□□□□□ -0.08
COL2A1-201ENST00000337299 TMOD1P28289 359 aa14.57□□□□□ -0.08
COL2A1-201ENST00000337299 ADORA1P30542 326 aa14.57□□□□□ -0.08
COL2A1-201ENST00000337299 CAVIN4Q5BKX8 364 aa14.57□□□□□ -0.08
COL2A1-201ENST00000337299 CNNM4Q6P4Q7 775 aa14.57□□□□□ -0.08
COL2A1-201ENST00000337299 OTUD6AQ7L8S5 288 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms