RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 IRF2BP1Q8IU81 584 aa16.72■□□□□ 0.27
UBA1-201ENST00000335972 BARHL2Q9NY43 387 aa16.72■□□□□ 0.27
UBA1-201ENST00000335972 TOM1O60784 492 aa16.72■□□□□ 0.27
UBA1-201ENST00000335972 PARP1P09874 1014 aaKnown RBP16.72■□□□□ 0.27
UBA1-201ENST00000335972 LONP1P36776 959 aaKnown RBP16.72■□□□□ 0.27
UBA1-201ENST00000335972 TXKP42681 527 aa16.72■□□□□ 0.27
UBA1-201ENST00000335972 FCHSD1Q86WN1 690 aa16.72■□□□□ 0.27
UBA1-201ENST00000335972 RWDD2AQ9UIY3 292 aa16.72■□□□□ 0.27
UBA1-201ENST00000335972 LEMD3Q9Y2U8 911 aa16.72■□□□□ 0.27
UBA1-201ENST00000335972 POLR3GO15318 223 aaPredicted RBP16.72■□□□□ 0.27
UBA1-201ENST00000335972 PANX2Q96RD6 677 aa16.72■□□□□ 0.27
UBA1-201ENST00000335972 FLT1P17948 1338 aa16.71■□□□□ 0.27
UBA1-201ENST00000335972 MYH8P13535 1937 aa16.71■□□□□ 0.27
UBA1-201ENST00000335972 PALM3A6NDB9 673 aaPredicted RBP16.71■□□□□ 0.27
UBA1-201ENST00000335972 SCNN1DP51172 638 aa16.71■□□□□ 0.27
UBA1-201ENST00000335972 MAP3K9P80192 1104 aa16.71■□□□□ 0.27
UBA1-201ENST00000335972 SLC35F6Q8N357 371 aa16.71■□□□□ 0.27
UBA1-201ENST00000335972 RNF216Q9NWF9 866 aaPredicted RBP16.71■□□□□ 0.27
UBA1-201ENST00000335972 GGA1Q9UJY5 639 aa16.71■□□□□ 0.27
UBA1-201ENST00000335972 MRFAP1Q9Y605 127 aa16.71■□□□□ 0.27
UBA1-201ENST00000335972 M0R2N6 131 aa16.71■□□□□ 0.27
UBA1-201ENST00000335972 KIF4BQ2VIQ3 1234 aa16.71■□□□□ 0.27
UBA1-201ENST00000335972 CTAGE1Q96RT6 745 aa16.71■□□□□ 0.27
UBA1-201ENST00000335972 B4DLN1 442 aa16.71■□□□□ 0.26
UBA1-201ENST00000335972 SERPINB2P05120 415 aa16.71■□□□□ 0.26
UBA1-201ENST00000335972 GSTO1P78417 241 aa16.71■□□□□ 0.26
UBA1-201ENST00000335972 CABP7Q86V35 215 aa16.71■□□□□ 0.26
UBA1-201ENST00000335972 POTEDQ86YR6 584 aa16.71■□□□□ 0.26
UBA1-201ENST00000335972 FHOD1Q9Y613 1164 aa16.71■□□□□ 0.26
UBA1-201ENST00000335972 ASIC1P78348 528 aa16.7■□□□□ 0.26
UBA1-201ENST00000335972 TBCKQ8TEA7 893 aa16.7■□□□□ 0.26
UBA1-201ENST00000335972 ABHD10Q9NUJ1 306 aa16.7■□□□□ 0.26
UBA1-201ENST00000335972 TPM1P09493 284 aa16.7■□□□□ 0.26
UBA1-201ENST00000335972 TMCO3Q6UWJ1 677 aa16.7■□□□□ 0.26
UBA1-201ENST00000335972 PCMTD1Q96MG8 357 aaPredicted RBP16.7■□□□□ 0.26
UBA1-201ENST00000335972 TTC26A0AVF1 554 aa16.69■□□□□ 0.26
UBA1-201ENST00000335972 KLRC4O43908 158 aa16.69■□□□□ 0.26
UBA1-201ENST00000335972 LDHCP07864 332 aa16.69■□□□□ 0.26
UBA1-201ENST00000335972 PNMA6AP0CW24 399 aaPredicted RBP16.69■□□□□ 0.26
UBA1-201ENST00000335972 STK4Q13043 487 aa16.69■□□□□ 0.26
UBA1-201ENST00000335972 DOK7Q18PE1 504 aa16.69■□□□□ 0.26
UBA1-201ENST00000335972 ARL6IP4Q66PJ3 421 aaKnown RBP16.69■□□□□ 0.26
UBA1-201ENST00000335972 DYMQ7RTS9 669 aa16.69■□□□□ 0.26
UBA1-201ENST00000335972 LIMA1Q9UHB6 759 aaKnown RBP16.69■□□□□ 0.26
UBA1-201ENST00000335972 KIAA1551Q9HCM1 1747 aa16.69■□□□□ 0.26
UBA1-201ENST00000335972 ERICH4A6NGS2 130 aa16.69■□□□□ 0.26
UBA1-201ENST00000335972 FAM196BA6NMK8 535 aa16.69■□□□□ 0.26
UBA1-201ENST00000335972 KIF5CO60282 957 aa16.69■□□□□ 0.26
UBA1-201ENST00000335972 SLC16A2P36021 539 aa16.69■□□□□ 0.26
UBA1-201ENST00000335972 ADSSL1Q8N142 457 aa16.69■□□□□ 0.26
UBA1-201ENST00000335972 CCDC148Q8NFR7 591 aa16.69■□□□□ 0.26
UBA1-201ENST00000335972 ZCCHC17Q9NP64 241 aaKnown RBP16.69■□□□□ 0.26
UBA1-201ENST00000335972 GUCA1BQ9UMX6 200 aa16.69■□□□□ 0.26
UBA1-201ENST00000335972 PDS5AQ29RF7 1337 aaKnown RBP16.69■□□□□ 0.26
UBA1-201ENST00000335972 GNAQP50148 359 aa16.69■□□□□ 0.26
UBA1-201ENST00000335972 PDE4DQ08499 809 aa16.69■□□□□ 0.26
UBA1-201ENST00000335972 SOGA3Q5TF21 947 aa16.69■□□□□ 0.26
UBA1-201ENST00000335972 SLC39A2Q9NP94 309 aa16.69■□□□□ 0.26
UBA1-201ENST00000335972 ENC1O14682 589 aa16.68■□□□□ 0.26
UBA1-201ENST00000335972 UBE2SQ16763 222 aa16.68■□□□□ 0.26
UBA1-201ENST00000335972 SHROOM1Q2M3G4 852 aaPredicted RBP16.68■□□□□ 0.26
UBA1-201ENST00000335972 DPP8Q6V1X1 898 aaPredicted RBP16.68■□□□□ 0.26
UBA1-201ENST00000335972 CNGA4Q8IV77 575 aa16.68■□□□□ 0.26
UBA1-201ENST00000335972 ANKRD20A12PQ8NF67 263 aa16.68■□□□□ 0.26
UBA1-201ENST00000335972 PARD6BQ9BYG5 372 aa16.68■□□□□ 0.26
UBA1-201ENST00000335972 SEC63Q9UGP8 760 aaKnown RBP16.68■□□□□ 0.26
UBA1-201ENST00000335972 EFCAB8A8MWE9 144 aa16.68■□□□□ 0.26
UBA1-201ENST00000335972 AKR1B1P15121 316 aa16.68■□□□□ 0.26
UBA1-201ENST00000335972 RHBDL3P58872 404 aa16.68■□□□□ 0.26
UBA1-201ENST00000335972 MEX3CQ5U5Q3 659 aaKnown RBP16.68■□□□□ 0.26
UBA1-201ENST00000335972 RRP36Q96EU6 259 aaKnown RBP16.68■□□□□ 0.26
UBA1-201ENST00000335972 CCDC88AQ3V6T2 1871 aa16.68■□□□□ 0.26
UBA1-201ENST00000335972 TDP2O95551 362 aa16.68■□□□□ 0.26
UBA1-201ENST00000335972 OR52Z1P0C646 297 aa16.68■□□□□ 0.26
UBA1-201ENST00000335972 RHOXF2BP0C7M4 288 aa16.68■□□□□ 0.26
UBA1-201ENST00000335972 GYS1P13807 737 aa16.68■□□□□ 0.26
UBA1-201ENST00000335972 CACNB3P54284 484 aa16.68■□□□□ 0.26
UBA1-201ENST00000335972 PPP4CP60510 307 aa16.68■□□□□ 0.26
UBA1-201ENST00000335972 NONOQ15233 471 aaKnown RBP eCLIP16.68■□□□□ 0.26
UBA1-201ENST00000335972 TTBK2Q6IQ55 1244 aa16.68■□□□□ 0.26
UBA1-201ENST00000335972 RHOXF2Q9BQY4 288 aa16.68■□□□□ 0.26
UBA1-201ENST00000335972 TCP11L1Q9NUJ3 509 aa16.68■□□□□ 0.26
UBA1-201ENST00000335972 RMND1Q9NWS8 449 aa16.68■□□□□ 0.26
UBA1-201ENST00000335972 BTAF1O14981 1849 aa16.67■□□□□ 0.26
UBA1-201ENST00000335972 SASH3O75995 380 aa16.67■□□□□ 0.26
UBA1-201ENST00000335972 CSGALNACT2Q8N6G5 542 aa16.67■□□□□ 0.26
UBA1-201ENST00000335972 TBC1D16Q8TBP0 767 aa16.67■□□□□ 0.26
UBA1-201ENST00000335972 AGPAT5Q9NUQ2 364 aa16.67■□□□□ 0.26
UBA1-201ENST00000335972 ZNF219Q9P2Y4 722 aaPredicted RBP16.67■□□□□ 0.26
UBA1-201ENST00000335972 SRCAPQ6ZRS2 3230 aa16.67■□□□□ 0.26
UBA1-201ENST00000335972 GOLGA6L9A6NEM1 432 aa16.67■□□□□ 0.26
UBA1-201ENST00000335972 POTEMA6NI47 508 aa16.67■□□□□ 0.26
UBA1-201ENST00000335972 MPHOSPH10O00566 681 aaKnown RBP16.67■□□□□ 0.26
UBA1-201ENST00000335972 PLA2G4AP47712 749 aa16.67■□□□□ 0.26
UBA1-201ENST00000335972 SH3GLB2Q9NR46 395 aa16.67■□□□□ 0.26
UBA1-201ENST00000335972 SNED1Q8TER0 1413 aa16.67■□□□□ 0.26
UBA1-201ENST00000335972 TNNI2P48788 182 aa16.67■□□□□ 0.26
UBA1-201ENST00000335972 ANKRD40Q6AI12 368 aa16.67■□□□□ 0.26
UBA1-201ENST00000335972 C16orf86Q6ZW13 317 aa16.67■□□□□ 0.26
UBA1-201ENST00000335972 HINFPQ9BQA5 517 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms