RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 RRP36Q96EU6 259 aaKnown RBP19.95■□□□□ 0.78
LRCH3-201ENST00000334859 CEP95Q96GE4 821 aa19.95■□□□□ 0.78
LRCH3-201ENST00000334859 RBM17Q96I25 401 aaKnown RBP19.95■□□□□ 0.78
LRCH3-201ENST00000334859 TRIM49BA6NDI0 452 aa19.95■□□□□ 0.78
LRCH3-201ENST00000334859 EFCAB8A8MWE9 144 aa19.95■□□□□ 0.78
LRCH3-201ENST00000334859 CCNT1O60563 726 aaKnown RBP19.95■□□□□ 0.78
LRCH3-201ENST00000334859 NEDD1Q8NHV4 660 aa19.95■□□□□ 0.78
LRCH3-201ENST00000334859 CCDC51Q96ER9 411 aa19.95■□□□□ 0.78
LRCH3-201ENST00000334859 NUP88Q99567 741 aaPredicted RBP19.95■□□□□ 0.78
LRCH3-201ENST00000334859 IRX2Q9BZI1 471 aaPredicted RBP19.95■□□□□ 0.78
LRCH3-201ENST00000334859 ZMYND12Q9H0C1 365 aa19.95■□□□□ 0.78
LRCH3-201ENST00000334859 VAT1LQ9HCJ6 419 aa19.95■□□□□ 0.78
LRCH3-201ENST00000334859 ZNF446Q9NWS9 450 aa19.95■□□□□ 0.78
LRCH3-201ENST00000334859 SERPINB2P05120 415 aa19.94■□□□□ 0.78
LRCH3-201ENST00000334859 NONOQ15233 471 aaKnown RBP eCLIP19.94■□□□□ 0.78
LRCH3-201ENST00000334859 KRT25Q7Z3Z0 450 aa19.94■□□□□ 0.78
LRCH3-201ENST00000334859 CERKQ8TCT0 537 aa19.94■□□□□ 0.78
LRCH3-201ENST00000334859 C6orf50Q9HD87 102 aa19.94■□□□□ 0.78
LRCH3-201ENST00000334859 MRFAP1Q9Y605 127 aa19.94■□□□□ 0.78
LRCH3-201ENST00000334859 MYH8P13535 1937 aa19.94■□□□□ 0.78
LRCH3-201ENST00000334859 SMCO2A6NFE2 343 aa19.93■□□□□ 0.78
LRCH3-201ENST00000334859 GYS1P13807 737 aa19.93■□□□□ 0.78
LRCH3-201ENST00000334859 PRPHP41219 470 aa19.93■□□□□ 0.78
LRCH3-201ENST00000334859 CLCN6P51797 869 aa19.93■□□□□ 0.78
LRCH3-201ENST00000334859 SOGA3Q5TF21 947 aa19.93■□□□□ 0.78
LRCH3-201ENST00000334859 SLF2Q8IX21 1173 aa19.93■□□□□ 0.78
LRCH3-201ENST00000334859 ADSSL1Q8N142 457 aa19.93■□□□□ 0.78
LRCH3-201ENST00000334859 KRT222Q8N1A0 295 aa19.93■□□□□ 0.78
LRCH3-201ENST00000334859 CCSER1Q9C0I3 900 aa19.93■□□□□ 0.78
LRCH3-201ENST00000334859 MYH1P12882 1939 aa19.93■□□□□ 0.78
LRCH3-201ENST00000334859 LRRC10BA6NIK2 292 aa19.93■□□□□ 0.78
LRCH3-201ENST00000334859 C6orf229H3BNL8 230 aa19.93■□□□□ 0.78
LRCH3-201ENST00000334859 PES1O00541 588 aaKnown RBP19.93■□□□□ 0.78
LRCH3-201ENST00000334859 OR52Z1P0C646 297 aa19.93■□□□□ 0.78
LRCH3-201ENST00000334859 RHBDL3P58872 404 aa19.93■□□□□ 0.78
LRCH3-201ENST00000334859 MAP3K9P80192 1104 aa19.93■□□□□ 0.78
LRCH3-201ENST00000334859 UBXN1Q04323 297 aa19.93■□□□□ 0.78
LRCH3-201ENST00000334859 PPP2R3AQ06190 1150 aa19.93■□□□□ 0.78
LRCH3-201ENST00000334859 STIM1Q13586 685 aa19.93■□□□□ 0.78
LRCH3-201ENST00000334859 ARGLU1Q9NWB6 273 aaPredicted RBP19.93■□□□□ 0.78
LRCH3-201ENST00000334859 A0A0U1RQJ8 604 aa19.92■□□□□ 0.78
LRCH3-201ENST00000334859 KIF5CO60282 957 aa19.92■□□□□ 0.78
LRCH3-201ENST00000334859 PLCG1P19174 1290 aa19.92■□□□□ 0.78
LRCH3-201ENST00000334859 GNA11P29992 359 aa19.92■□□□□ 0.78
LRCH3-201ENST00000334859 DMTNQ08495 405 aa19.92■□□□□ 0.78
LRCH3-201ENST00000334859 CABP7Q86V35 215 aa19.92■□□□□ 0.78
LRCH3-201ENST00000334859 ATRIPQ8WXE1 791 aa19.92■□□□□ 0.78
LRCH3-201ENST00000334859 TRIM47Q96LD4 638 aa19.92■□□□□ 0.78
LRCH3-201ENST00000334859 ABHD10Q9NUJ1 306 aa19.92■□□□□ 0.78
LRCH3-201ENST00000334859 POLLQ9UGP5 575 aa19.92■□□□□ 0.78
LRCH3-201ENST00000334859 H7C1D1 291 aa19.92■□□□□ 0.78
LRCH3-201ENST00000334859 PSMA7O14818 248 aa19.92■□□□□ 0.78
LRCH3-201ENST00000334859 TBC1D16Q8TBP0 767 aa19.92■□□□□ 0.78
LRCH3-201ENST00000334859 TBC1D22AQ8WUA7 517 aa19.92■□□□□ 0.78
LRCH3-201ENST00000334859 PIGSQ96S52 555 aa19.92■□□□□ 0.78
LRCH3-201ENST00000334859 KBTBD4Q9NVX7 518 aa19.92■□□□□ 0.78
LRCH3-201ENST00000334859 MYL1P05976 194 aa19.91■□□□□ 0.78
LRCH3-201ENST00000334859 PMS1P54277 932 aaKnown RBP19.91■□□□□ 0.78
LRCH3-201ENST00000334859 PICALMQ13492 652 aa19.91■□□□□ 0.78
LRCH3-201ENST00000334859 TRIM14Q14142 442 aa19.91■□□□□ 0.78
LRCH3-201ENST00000334859 KCNB1Q14721 858 aa19.91■□□□□ 0.78
LRCH3-201ENST00000334859 TXNRD1Q16881 649 aa19.91■□□□□ 0.78
LRCH3-201ENST00000334859 NEK8Q86SG6 692 aa19.91■□□□□ 0.78
LRCH3-201ENST00000334859 LRRC15Q8TF66 581 aa19.91■□□□□ 0.78
LRCH3-201ENST00000334859 GJD4Q96KN9 370 aaPredicted RBP19.91■□□□□ 0.78
LRCH3-201ENST00000334859 USP17L5A8MUK1 530 aa19.91■□□□□ 0.78
LRCH3-201ENST00000334859 TEX35Q5T0J7 233 aa19.91■□□□□ 0.78
LRCH3-201ENST00000334859 MEX3CQ5U5Q3 659 aaKnown RBP19.91■□□□□ 0.78
LRCH3-201ENST00000334859 TMTC1Q8IUR5 882 aa19.91■□□□□ 0.78
LRCH3-201ENST00000334859 ACRBPQ8NEB7 543 aa19.91■□□□□ 0.78
LRCH3-201ENST00000334859 AK8Q96MA6 479 aa19.91■□□□□ 0.78
LRCH3-201ENST00000334859 UBA5Q9GZZ9 404 aa19.91■□□□□ 0.78
LRCH3-201ENST00000334859 UBR3Q6ZT12 1888 aa19.9■□□□□ 0.78
LRCH3-201ENST00000334859 KLRC4O43908 158 aa19.9■□□□□ 0.78
LRCH3-201ENST00000334859 RHOBTB3O94955 611 aa19.9■□□□□ 0.78
LRCH3-201ENST00000334859 REXO1Q8N1G1 1221 aaKnown RBP19.9■□□□□ 0.78
LRCH3-201ENST00000334859 GAKO14976 1311 aa19.9■□□□□ 0.78
LRCH3-201ENST00000334859 FRMPD2Q68DX3 1309 aaPredicted RBP19.9■□□□□ 0.78
LRCH3-201ENST00000334859 RNF225M0QZC1 329 aaPredicted RBP19.9■□□□□ 0.78
LRCH3-201ENST00000334859 BBOX1O75936 387 aa19.9■□□□□ 0.78
LRCH3-201ENST00000334859 KRT9P35527 623 aa19.9■□□□□ 0.78
LRCH3-201ENST00000334859 ERVK-24P63145 666 aa19.9■□□□□ 0.78
LRCH3-201ENST00000334859 JAKMIP3Q5VZ66 844 aa19.9■□□□□ 0.78
LRCH3-201ENST00000334859 IRF2BP1Q8IU81 584 aa19.9■□□□□ 0.78
LRCH3-201ENST00000334859 TBCKQ8TEA7 893 aa19.9■□□□□ 0.78
LRCH3-201ENST00000334859 BIN2Q9UBW5 565 aaPredicted RBP19.9■□□□□ 0.78
LRCH3-201ENST00000334859 FECHP22830 423 aa19.89■□□□□ 0.77
LRCH3-201ENST00000334859 GTF2IP78347 998 aa19.89■□□□□ 0.77
LRCH3-201ENST00000334859 CYP26C1Q6V0L0 522 aa19.89■□□□□ 0.77
LRCH3-201ENST00000334859 GIMAP8Q8ND71 665 aaPredicted RBP19.89■□□□□ 0.77
LRCH3-201ENST00000334859 FAM163AQ96GL9 167 aaPredicted RBP19.89■□□□□ 0.77
LRCH3-201ENST00000334859 CUEDC2Q9H467 287 aa19.89■□□□□ 0.77
LRCH3-201ENST00000334859 MAGEF1Q9HAY2 307 aa19.89■□□□□ 0.77
LRCH3-201ENST00000334859 MAGEC2Q9UBF1 373 aaPredicted RBP19.89■□□□□ 0.77
LRCH3-201ENST00000334859 TTF2Q9UNY4 1162 aaKnown RBP19.89■□□□□ 0.77
LRCH3-201ENST00000334859 DAGLAQ9Y4D2 1042 aa19.89■□□□□ 0.77
LRCH3-201ENST00000334859 TECP42680 631 aa19.88■□□□□ 0.77
LRCH3-201ENST00000334859 ASIC1P78348 528 aa19.88■□□□□ 0.77
LRCH3-201ENST00000334859 ZNF569Q5MCW4 686 aa19.88■□□□□ 0.77
LRCH3-201ENST00000334859 TMCO3Q6UWJ1 677 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms