RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 FAM13BQ9NYF5 915 aa14.63□□□□□ -0.07
DDX39A-202ENST00000324340 R3HCC1Q9Y3T6 440 aaKnown RBP14.63□□□□□ -0.07
DDX39A-202ENST00000324340 ELP1O95163 1332 aa14.62□□□□□ -0.07
DDX39A-202ENST00000324340 UNCXA6NJT0 531 aa14.62□□□□□ -0.07
DDX39A-202ENST00000324340 C19orf81C9J6K1 198 aa14.62□□□□□ -0.07
DDX39A-202ENST00000324340 M0R2N6 131 aa14.62□□□□□ -0.07
DDX39A-202ENST00000324340 SPP2Q13103 211 aa14.62□□□□□ -0.07
DDX39A-202ENST00000324340 MTMR2Q13614 643 aa14.62□□□□□ -0.07
DDX39A-202ENST00000324340 FOXD4L6Q3SYB3 417 aaPredicted RBP14.62□□□□□ -0.07
DDX39A-202ENST00000324340 FAM83BQ5T0W9 1011 aa14.62□□□□□ -0.07
DDX39A-202ENST00000324340 SYDE2Q5VT97 1194 aa14.62□□□□□ -0.07
DDX39A-202ENST00000324340 MYSM1Q5VVJ2 828 aa14.62□□□□□ -0.07
DDX39A-202ENST00000324340 MAP1SQ66K74 1059 aaPredicted RBP14.62□□□□□ -0.07
DDX39A-202ENST00000324340 PPP1R18Q6NYC8 613 aa14.62□□□□□ -0.07
DDX39A-202ENST00000324340 FOXD4L3Q6VB84 417 aaPredicted RBP14.62□□□□□ -0.07
DDX39A-202ENST00000324340 FAM160B2Q86V87 743 aa14.62□□□□□ -0.07
DDX39A-202ENST00000324340 ANKRD13AQ8IZ07 590 aa14.62□□□□□ -0.07
DDX39A-202ENST00000324340 ZNF784Q8NCA9 323 aaPredicted RBP14.62□□□□□ -0.07
DDX39A-202ENST00000324340 OXER1Q8TDS5 423 aa14.62□□□□□ -0.07
DDX39A-202ENST00000324340 CHURC1Q8WUH1 139 aa14.62□□□□□ -0.07
DDX39A-202ENST00000324340 ZNF396Q96N95 335 aaPredicted RBP14.62□□□□□ -0.07
DDX39A-202ENST00000324340 SCAND2PQ9GZW5 306 aaPredicted RBP14.62□□□□□ -0.07
DDX39A-202ENST00000324340 BRMS1Q9HCU9 246 aa14.62□□□□□ -0.07
DDX39A-202ENST00000324340 EMILIN3Q9NT22 766 aa14.62□□□□□ -0.07
DDX39A-202ENST00000324340 FEM1BQ9UK73 627 aa14.62□□□□□ -0.07
DDX39A-202ENST00000324340 CFAP45Q9UL16 551 aa14.62□□□□□ -0.07
DDX39A-202ENST00000324340 CLEC11AQ9Y240 323 aa14.62□□□□□ -0.07
DDX39A-202ENST00000324340 AFG3L2Q9Y4W6 797 aa14.62□□□□□ -0.07
DDX39A-202ENST00000324340 ZHX2Q9Y6X8 837 aa14.62□□□□□ -0.07
DDX39A-202ENST00000324340 PARP14Q460N5 1801 aa14.61□□□□□ -0.07
DDX39A-202ENST00000324340 PPP1R11O60927 126 aaPredicted RBP14.61□□□□□ -0.07
DDX39A-202ENST00000324340 NLRP5P59047 1200 aa14.61□□□□□ -0.07
DDX39A-202ENST00000324340 GNL2Q13823 731 aaKnown RBP14.61□□□□□ -0.07
DDX39A-202ENST00000324340 PRKG1Q13976 671 aa14.61□□□□□ -0.07
DDX39A-202ENST00000324340 ZYXQ15942 572 aaKnown RBP14.61□□□□□ -0.07
DDX39A-202ENST00000324340 CDC37Q16543 378 aaPredicted RBP14.61□□□□□ -0.07
DDX39A-202ENST00000324340 QRICH1Q2TAL8 776 aa14.61□□□□□ -0.07
DDX39A-202ENST00000324340 SH3D19Q5HYK7 790 aa14.61□□□□□ -0.07
DDX39A-202ENST00000324340 PRR12Q9ULL5 1215 aa14.61□□□□□ -0.07
DDX39A-202ENST00000324340 PCDHA4Q9UN74 947 aa14.61□□□□□ -0.07
DDX39A-202ENST00000324340 CSADQ9Y600 493 aa14.61□□□□□ -0.07
DDX39A-202ENST00000324340 DDX49Q9Y6V7 483 aaKnown RBP14.61□□□□□ -0.07
DDX39A-202ENST00000324340 PTPRFP10586 1907 aa14.6□□□□□ -0.07
DDX39A-202ENST00000324340 NAPAP54920 295 aa14.6□□□□□ -0.07
DDX39A-202ENST00000324340 NR5A1Q13285 461 aa14.6□□□□□ -0.07
DDX39A-202ENST00000324340 LDLRAD1Q5T700 205 aa14.6□□□□□ -0.07
DDX39A-202ENST00000324340 ARMC9Q7Z3E5 817 aa14.6□□□□□ -0.07
DDX39A-202ENST00000324340 BLIDQ8IZY5 108 aa14.6□□□□□ -0.07
DDX39A-202ENST00000324340 MYRIPQ8NFW9 859 aa14.6□□□□□ -0.07
DDX39A-202ENST00000324340 RBM46Q8TBY0 533 aaKnown RBP14.6□□□□□ -0.07
DDX39A-202ENST00000324340 NMRK2Q9NPI5 230 aa14.6□□□□□ -0.07
DDX39A-202ENST00000324340 POLR3EQ9NVU0 708 aa14.6□□□□□ -0.07
DDX39A-202ENST00000324340 RTEL1Q9NZ71 1219 aa14.6□□□□□ -0.07
DDX39A-202ENST00000324340 FIBPO43427 364 aa14.6□□□□□ -0.07
DDX39A-202ENST00000324340 PRPF40AO75400 957 aaKnown RBP14.6□□□□□ -0.07
DDX39A-202ENST00000324340 VCAM1P19320 739 aa14.6□□□□□ -0.07
DDX39A-202ENST00000324340 GNA11P29992 359 aa14.6□□□□□ -0.07
DDX39A-202ENST00000324340 PPATQ06203 517 aa14.6□□□□□ -0.07
DDX39A-202ENST00000324340 RILPL1Q5EBL4 403 aa14.6□□□□□ -0.07
DDX39A-202ENST00000324340 USP28Q96RU2 1077 aa14.6□□□□□ -0.07
DDX39A-202ENST00000324340 RANBP17Q9H2T7 1088 aaKnown RBP14.6□□□□□ -0.07
DDX39A-202ENST00000324340 GDPD2Q9HCC8 539 aa14.6□□□□□ -0.07
DDX39A-202ENST00000324340 C6orf50Q9HD87 102 aa14.6□□□□□ -0.07
DDX39A-202ENST00000324340 TFIP11Q9UBB9 837 aaKnown RBP14.6□□□□□ -0.07
DDX39A-202ENST00000324340 RCOR1Q9UKL0 485 aa14.6□□□□□ -0.07
DDX39A-202ENST00000324340 LOC285556D6RIA3 1793 aa14.59□□□□□ -0.07
DDX39A-202ENST00000324340 SMCO2A6NFE2 343 aa14.59□□□□□ -0.07
DDX39A-202ENST00000324340 SPDYE5A6NIY4 337 aa14.59□□□□□ -0.07
DDX39A-202ENST00000324340 TRIM75PA6NK02 468 aa14.59□□□□□ -0.07
DDX39A-202ENST00000324340 YEATS4O95619 227 aa14.59□□□□□ -0.07
DDX39A-202ENST00000324340 TOB1P50616 345 aaPredicted RBP14.59□□□□□ -0.07
DDX39A-202ENST00000324340 FKBP1BP68106 108 aa14.59□□□□□ -0.07
DDX39A-202ENST00000324340 TRAF1Q13077 416 aa14.59□□□□□ -0.07
DDX39A-202ENST00000324340 IKQ13123 557 aaPredicted RBP14.59□□□□□ -0.07
DDX39A-202ENST00000324340 ERO1BQ86YB8 467 aa14.59□□□□□ -0.07
DDX39A-202ENST00000324340 LEO1Q8WVC0 666 aaPredicted RBP14.59□□□□□ -0.07
DDX39A-202ENST00000324340 COA7Q96BR5 231 aa14.59□□□□□ -0.07
DDX39A-202ENST00000324340 AMNQ9BXJ7 453 aa14.59□□□□□ -0.07
DDX39A-202ENST00000324340 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.59□□□□□ -0.07
DDX39A-202ENST00000324340 RLFQ13129 1914 aa14.58□□□□□ -0.08
DDX39A-202ENST00000324340 TRAF5O00463 557 aa14.58□□□□□ -0.08
DDX39A-202ENST00000324340 ADAMTS3O15072 1205 aa14.58□□□□□ -0.08
DDX39A-202ENST00000324340 ZSCAN20P17040 1043 aaPredicted RBP14.58□□□□□ -0.08
DDX39A-202ENST00000324340 DGKZQ13574 1117 aa14.58□□□□□ -0.08
DDX39A-202ENST00000324340 EARS2Q5JPH6 523 aaKnown RBP14.58□□□□□ -0.08
DDX39A-202ENST00000324340 ANO1Q5XXA6 986 aa14.58□□□□□ -0.08
DDX39A-202ENST00000324340 MOB2Q70IA6 237 aa14.58□□□□□ -0.08
DDX39A-202ENST00000324340 TEX2Q8IWB9 1127 aa14.58□□□□□ -0.08
DDX39A-202ENST00000324340 PRPF38AQ8NAV1 312 aaKnown RBP14.58□□□□□ -0.08
DDX39A-202ENST00000324340 BICD2Q8TD16 824 aa14.58□□□□□ -0.08
DDX39A-202ENST00000324340 SPATA32Q96LK8 384 aa14.58□□□□□ -0.08
DDX39A-202ENST00000324340 SLF1Q9BQI6 1058 aa14.58□□□□□ -0.08
DDX39A-202ENST00000324340 RPAP3Q9H6T3 665 aaPredicted RBP14.58□□□□□ -0.08
DDX39A-202ENST00000324340 RIC8AQ9NPQ8 531 aa14.58□□□□□ -0.08
DDX39A-202ENST00000324340 PCDHA6Q9UN73 950 aa14.58□□□□□ -0.08
DDX39A-202ENST00000324340 PCDHA8Q9Y5H6 950 aa14.58□□□□□ -0.08
DDX39A-202ENST00000324340 PCDHA1Q9Y5I3 950 aa14.58□□□□□ -0.08
DDX39A-202ENST00000324340 CXCL11O14625 94 aa14.57□□□□□ -0.08
DDX39A-202ENST00000324340 TRAPPC10P48553 1259 aa14.57□□□□□ -0.08
DDX39A-202ENST00000324340 HMGCS2P54868 508 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms