RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 EVX2Q03828 476 aa16.82■□□□□ 0.28
CHFR-202ENST00000315585 SLC4A8Q2Y0W8 1093 aa16.82■□□□□ 0.28
CHFR-202ENST00000315585 RRAGBQ5VZM2 374 aa16.82■□□□□ 0.28
CHFR-202ENST00000315585 PDXDC2PQ6P474 469 aa16.82■□□□□ 0.28
CHFR-202ENST00000315585 CERS5Q8N5B7 392 aa16.82■□□□□ 0.28
CHFR-202ENST00000315585 DDX60LQ5H9U9 1706 aaKnown RBP16.82■□□□□ 0.28
CHFR-202ENST00000315585 H7C1D1 291 aa16.82■□□□□ 0.28
CHFR-202ENST00000315585 PPP1R2P41236 205 aa16.82■□□□□ 0.28
CHFR-202ENST00000315585 LIMA1Q9UHB6 759 aaKnown RBP16.82■□□□□ 0.28
CHFR-202ENST00000315585 FOCADQ5VW36 1801 aa16.82■□□□□ 0.28
CHFR-202ENST00000315585 ECE2O60344 883 aa16.81■□□□□ 0.28
CHFR-202ENST00000315585 RASA1P20936 1047 aa16.81■□□□□ 0.28
CHFR-202ENST00000315585 GNA11P29992 359 aa16.81■□□□□ 0.28
CHFR-202ENST00000315585 GNG11P61952 73 aa16.81■□□□□ 0.28
CHFR-202ENST00000315585 ORC2Q13416 577 aaPredicted RBP16.81■□□□□ 0.28
CHFR-202ENST00000315585 UTP14CQ5TAP6 766 aaKnown RBP16.81■□□□□ 0.28
CHFR-202ENST00000315585 WWC2Q6AWC2 1192 aa16.81■□□□□ 0.28
CHFR-202ENST00000315585 RASSF8Q8NHQ8 419 aa16.81■□□□□ 0.28
CHFR-202ENST00000315585 C7orf43Q8WVR3 580 aa16.81■□□□□ 0.28
CHFR-202ENST00000315585 AK8Q96MA6 479 aa16.81■□□□□ 0.28
CHFR-202ENST00000315585 MED15Q96RN5 788 aa16.81■□□□□ 0.28
CHFR-202ENST00000315585 DBNDD1Q9H9R9 158 aa16.81■□□□□ 0.28
CHFR-202ENST00000315585 IL17RBQ9NRM6 502 aa16.81■□□□□ 0.28
CHFR-202ENST00000315585 USP40Q9NVE5 1235 aa16.81■□□□□ 0.28
CHFR-202ENST00000315585 BARHL2Q9NY43 387 aa16.81■□□□□ 0.28
CHFR-202ENST00000315585 SLX4Q8IY92 1834 aa16.81■□□□□ 0.28
CHFR-202ENST00000315585 MYH1P12882 1939 aa16.81■□□□□ 0.28
CHFR-202ENST00000315585 UBA7P41226 1012 aa16.81■□□□□ 0.28
CHFR-202ENST00000315585 KCNB1Q14721 858 aa16.81■□□□□ 0.28
CHFR-202ENST00000315585 KRT222Q8N1A0 295 aa16.81■□□□□ 0.28
CHFR-202ENST00000315585 NEDD1Q8NHV4 660 aa16.81■□□□□ 0.28
CHFR-202ENST00000315585 CCSER1Q9C0I3 900 aa16.81■□□□□ 0.28
CHFR-202ENST00000315585 C10orf71Q711Q0 1435 aa16.81■□□□□ 0.28
CHFR-202ENST00000315585 USP17L3A6NCW0 530 aa16.8■□□□□ 0.28
CHFR-202ENST00000315585 USP17L4A6NCW7 530 aa16.8■□□□□ 0.28
CHFR-202ENST00000315585 RPN1P04843 607 aaKnown RBP16.8■□□□□ 0.28
CHFR-202ENST00000315585 CD44P16070 742 aaKnown RBP16.8■□□□□ 0.28
CHFR-202ENST00000315585 PBX1P40424 430 aa16.8■□□□□ 0.28
CHFR-202ENST00000315585 BMS1Q14692 1282 aaKnown RBP16.8■□□□□ 0.28
CHFR-202ENST00000315585 NAA30Q147X3 362 aaPredicted RBP16.8■□□□□ 0.28
CHFR-202ENST00000315585 KMT5BQ4FZB7 885 aa16.8■□□□□ 0.28
CHFR-202ENST00000315585 USP17L1Q7RTZ2 530 aa16.8■□□□□ 0.28
CHFR-202ENST00000315585 TMTC1Q8IUR5 882 aa16.8■□□□□ 0.28
CHFR-202ENST00000315585 SPZ1Q9BXG8 430 aa16.8■□□□□ 0.28
CHFR-202ENST00000315585 ZMYND15Q9H091 742 aa16.8■□□□□ 0.28
CHFR-202ENST00000315585 DISC1Q9NRI5 854 aa16.8■□□□□ 0.28
CHFR-202ENST00000315585 SWAP70Q9UH65 585 aa16.8■□□□□ 0.28
CHFR-202ENST00000315585 MAD2L2Q9UI95 211 aa16.8■□□□□ 0.28
CHFR-202ENST00000315585 N4BP3O15049 544 aa16.8■□□□□ 0.28
CHFR-202ENST00000315585 STX17P56962 302 aa16.8■□□□□ 0.28
CHFR-202ENST00000315585 APTXQ7Z2E3 356 aaKnown RBP16.8■□□□□ 0.28
CHFR-202ENST00000315585 KRT25Q7Z3Z0 450 aa16.8■□□□□ 0.28
CHFR-202ENST00000315585 TTLL6Q8N841 843 aa16.8■□□□□ 0.28
CHFR-202ENST00000315585 CTNND2Q9UQB3 1225 aa16.8■□□□□ 0.28
CHFR-202ENST00000315585 PALM3A6NDB9 673 aaPredicted RBP16.79■□□□□ 0.28
CHFR-202ENST00000315585 SPDYE4A6NLX3 237 aa16.79■□□□□ 0.28
CHFR-202ENST00000315585 hCG_1984214I3L0E3 225 aa16.79■□□□□ 0.28
CHFR-202ENST00000315585 HLA-DOAP06340 250 aa16.79■□□□□ 0.28
CHFR-202ENST00000315585 CCDC125Q86Z20 511 aa16.79■□□□□ 0.28
CHFR-202ENST00000315585 RTKN2Q8IZC4 609 aa16.79■□□□□ 0.28
CHFR-202ENST00000315585 ZNF713Q8N859 430 aaPredicted RBP16.79■□□□□ 0.28
CHFR-202ENST00000315585 C4orf32Q8N8J7 132 aa16.79■□□□□ 0.28
CHFR-202ENST00000315585 NOC3LQ8WTT2 800 aaKnown RBP16.79■□□□□ 0.28
CHFR-202ENST00000315585 ZDHHC15Q96MV8 337 aa16.79■□□□□ 0.28
CHFR-202ENST00000315585 C6orf50Q9HD87 102 aa16.79■□□□□ 0.28
CHFR-202ENST00000315585 ZNF219Q9P2Y4 722 aaPredicted RBP16.79■□□□□ 0.28
CHFR-202ENST00000315585 STX8Q9UNK0 236 aa16.79■□□□□ 0.28
CHFR-202ENST00000315585 MYO3BQ8WXR4 1341 aa16.79■□□□□ 0.28
CHFR-202ENST00000315585 M0R2N6 131 aa16.79■□□□□ 0.28
CHFR-202ENST00000315585 KIF5CO60282 957 aa16.79■□□□□ 0.28
CHFR-202ENST00000315585 CRKP46108 304 aa16.79■□□□□ 0.28
CHFR-202ENST00000315585 PICALMQ13492 652 aa16.79■□□□□ 0.28
CHFR-202ENST00000315585 ERCC6LQ2NKX8 1250 aa16.79■□□□□ 0.28
CHFR-202ENST00000315585 WNT7AO00755 349 aa16.78■□□□□ 0.28
CHFR-202ENST00000315585 MFAP3LO75121 409 aa16.78■□□□□ 0.28
CHFR-202ENST00000315585 H2AFXP16104 143 aaPredicted RBP16.78■□□□□ 0.28
CHFR-202ENST00000315585 SCNN1DP51172 638 aa16.78■□□□□ 0.28
CHFR-202ENST00000315585 MAP3K9P80192 1104 aa16.78■□□□□ 0.28
CHFR-202ENST00000315585 GABPB1Q06547 395 aaPredicted RBP16.78■□□□□ 0.28
CHFR-202ENST00000315585 RBL2Q08999 1139 aa16.78■□□□□ 0.28
CHFR-202ENST00000315585 DACT2Q5SW24 774 aa16.78■□□□□ 0.28
CHFR-202ENST00000315585 FBXO38Q6PIJ6 1188 aa16.78■□□□□ 0.28
CHFR-202ENST00000315585 HEATR3Q7Z4Q2 680 aa16.78■□□□□ 0.28
CHFR-202ENST00000315585 DEFB132Q7Z7B7 95 aa16.78■□□□□ 0.28
CHFR-202ENST00000315585 SLC44A5Q8NCS7 719 aa16.78■□□□□ 0.28
CHFR-202ENST00000315585 NELFBQ8WX92 580 aa16.78■□□□□ 0.28
CHFR-202ENST00000315585 SEC63Q9UGP8 760 aaKnown RBP16.78■□□□□ 0.28
CHFR-202ENST00000315585 PCDHA6Q9UN73 950 aa16.78■□□□□ 0.28
CHFR-202ENST00000315585 PCDHA8Q9Y5H6 950 aa16.78■□□□□ 0.28
CHFR-202ENST00000315585 PARP1P09874 1014 aaKnown RBP16.78■□□□□ 0.28
CHFR-202ENST00000315585 HOXA7P31268 230 aaPredicted RBP16.78■□□□□ 0.28
CHFR-202ENST00000315585 AMPD3Q01432 767 aa16.78■□□□□ 0.28
CHFR-202ENST00000315585 ARHGAP29Q52LW3 1261 aa16.78■□□□□ 0.28
CHFR-202ENST00000315585 SOGA3Q5TF21 947 aa16.78■□□□□ 0.28
CHFR-202ENST00000315585 TMEM47Q9BQJ4 181 aa16.78■□□□□ 0.28
CHFR-202ENST00000315585 ZMYND12Q9H0C1 365 aa16.78■□□□□ 0.28
CHFR-202ENST00000315585 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.78■□□□□ 0.28
CHFR-202ENST00000315585 V9GYY5 206 aaPredicted RBP16.78■□□□□ 0.28
CHFR-202ENST00000315585 PSMA7O14818 248 aa16.77■□□□□ 0.28
CHFR-202ENST00000315585 TEX33O43247 280 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms