RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 VAT1LQ9HCJ6 419 aa14.67□□□□□ -0.06
CHMP2A-201ENST00000312547 TXNRD2Q9NNW7 524 aa14.67□□□□□ -0.06
CHMP2A-201ENST00000312547 RNF186Q9NXI6 227 aa14.67□□□□□ -0.06
CHMP2A-201ENST00000312547 BTBD7Q9P203 1132 aa14.67□□□□□ -0.06
CHMP2A-201ENST00000312547 MORF4L1Q9UBU8 362 aa14.67□□□□□ -0.06
CHMP2A-201ENST00000312547 ZNF214Q9UL59 606 aaPredicted RBP14.67□□□□□ -0.06
CHMP2A-201ENST00000312547 STK36Q9NRP7 1315 aa14.66□□□□□ -0.06
CHMP2A-201ENST00000312547 A0A0G2JMZ2 1700 aa14.66□□□□□ -0.06
CHMP2A-201ENST00000312547 PRPF3O43395 683 aaKnown RBP14.66□□□□□ -0.06
CHMP2A-201ENST00000312547 PPP1R11O60927 126 aaPredicted RBP14.66□□□□□ -0.06
CHMP2A-201ENST00000312547 CDKL5O76039 1030 aa14.66□□□□□ -0.06
CHMP2A-201ENST00000312547 FMNL1O95466 1100 aaPredicted RBP14.66□□□□□ -0.06
CHMP2A-201ENST00000312547 BCRP11274 1271 aa14.66□□□□□ -0.06
CHMP2A-201ENST00000312547 SNAP25P60880 206 aa14.66□□□□□ -0.06
CHMP2A-201ENST00000312547 QRICH1Q2TAL8 776 aa14.66□□□□□ -0.06
CHMP2A-201ENST00000312547 SAMD1Q6SPF0 538 aaPredicted RBP14.66□□□□□ -0.06
CHMP2A-201ENST00000312547 C17orf99Q6UX52 265 aa14.66□□□□□ -0.06
CHMP2A-201ENST00000312547 SMARCC2Q8TAQ2 1214 aa14.66□□□□□ -0.06
CHMP2A-201ENST00000312547 PHKBQ93100 1093 aa14.66□□□□□ -0.06
CHMP2A-201ENST00000312547 RRP36Q96EU6 259 aaKnown RBP14.66□□□□□ -0.06
CHMP2A-201ENST00000312547 R3HDMLQ9H3Y0 253 aa14.66□□□□□ -0.06
CHMP2A-201ENST00000312547 V9GY48 417 aaPredicted RBP14.66□□□□□ -0.06
CHMP2A-201ENST00000312547 PARP14Q460N5 1801 aa14.66□□□□□ -0.06
CHMP2A-201ENST00000312547 PNMA6FA0A0J9YX94 578 aa14.65□□□□□ -0.06
CHMP2A-201ENST00000312547 PTPDC1A2A3K4 754 aa14.65□□□□□ -0.06
CHMP2A-201ENST00000312547 JAK2O60674 1132 aa14.65□□□□□ -0.06
CHMP2A-201ENST00000312547 PEX10O60683 326 aa14.65□□□□□ -0.06
CHMP2A-201ENST00000312547 ICAM1P05362 532 aa14.65□□□□□ -0.06
CHMP2A-201ENST00000312547 FDPSP14324 419 aaKnown RBP14.65□□□□□ -0.06
CHMP2A-201ENST00000312547 MAP2K1Q02750 393 aaPredicted RBP14.65□□□□□ -0.06
CHMP2A-201ENST00000312547 PKN1Q16512 942 aa14.65□□□□□ -0.06
CHMP2A-201ENST00000312547 FAM110CQ1W6H9 321 aa14.65□□□□□ -0.06
CHMP2A-201ENST00000312547 SLC26A6Q9BXS9 759 aa14.65□□□□□ -0.06
CHMP2A-201ENST00000312547 SAGE1Q9NXZ1 904 aa14.65□□□□□ -0.06
CHMP2A-201ENST00000312547 RBM27Q9P2N5 1060 aaKnown RBP14.65□□□□□ -0.06
CHMP2A-201ENST00000312547 hCG_1642624A0A1W2PR95 340 aa14.64□□□□□ -0.07
CHMP2A-201ENST00000312547 PPFIA3O75145 1194 aa14.64□□□□□ -0.07
CHMP2A-201ENST00000312547 ERVK-9P63128 1117 aa14.64□□□□□ -0.07
CHMP2A-201ENST00000312547 ERVK-24P63145 666 aa14.64□□□□□ -0.07
CHMP2A-201ENST00000312547 SSRP1Q08945 709 aaKnown RBP14.64□□□□□ -0.07
CHMP2A-201ENST00000312547 PFKFB3Q16875 520 aaPredicted RBP14.64□□□□□ -0.07
CHMP2A-201ENST00000312547 Q3C1V9 767 aa14.64□□□□□ -0.07
CHMP2A-201ENST00000312547 CCDC174Q6PII3 467 aa14.64□□□□□ -0.07
CHMP2A-201ENST00000312547 HOMER1Q86YM7 354 aa14.64□□□□□ -0.07
CHMP2A-201ENST00000312547 ANKRD13CQ8N6S4 541 aa14.64□□□□□ -0.07
CHMP2A-201ENST00000312547 GPRC5AQ8NFJ5 357 aa14.64□□□□□ -0.07
CHMP2A-201ENST00000312547 INTS4Q96HW7 963 aaKnown RBP14.64□□□□□ -0.07
CHMP2A-201ENST00000312547 AGBL1Q96MI9 1066 aa14.64□□□□□ -0.07
CHMP2A-201ENST00000312547 PAGR1Q9BTK6 254 aa14.64□□□□□ -0.07
CHMP2A-201ENST00000312547 TEX13BQ9BXU2 312 aa14.64□□□□□ -0.07
CHMP2A-201ENST00000312547 SPATC1LQ9H0A9 340 aa14.64□□□□□ -0.07
CHMP2A-201ENST00000312547 RAVER2Q9HCJ3 691 aaKnown RBP14.64□□□□□ -0.07
CHMP2A-201ENST00000312547 WBP1LQ9NX94 342 aa14.64□□□□□ -0.07
CHMP2A-201ENST00000312547 SEC63Q9UGP8 760 aaKnown RBP14.64□□□□□ -0.07
CHMP2A-201ENST00000312547 CPA4Q9UI42 421 aa14.64□□□□□ -0.07
CHMP2A-201ENST00000312547 PNMA2Q9UL42 364 aa14.64□□□□□ -0.07
CHMP2A-201ENST00000312547 DTNBO60941 627 aa14.63□□□□□ -0.07
CHMP2A-201ENST00000312547 TRPA1O75762 1119 aa14.63□□□□□ -0.07
CHMP2A-201ENST00000312547 DEXIO95424 95 aa14.63□□□□□ -0.07
CHMP2A-201ENST00000312547 STAT3P40763 770 aa14.63□□□□□ -0.07
CHMP2A-201ENST00000312547 FBXO11Q86XK2 927 aa14.63□□□□□ -0.07
CHMP2A-201ENST00000312547 RIOX2Q8IUF8 465 aa14.63□□□□□ -0.07
CHMP2A-201ENST00000312547 TRIM22Q8IYM9 498 aa14.63□□□□□ -0.07
CHMP2A-201ENST00000312547 PIBF1Q8WXW3 757 aa14.63□□□□□ -0.07
CHMP2A-201ENST00000312547 AMNQ9BXJ7 453 aa14.63□□□□□ -0.07
CHMP2A-201ENST00000312547 MOV10L1Q9BXT6 1211 aaKnown RBP14.63□□□□□ -0.07
CHMP2A-201ENST00000312547 ORC3Q9UBD5 711 aaPredicted RBP14.63□□□□□ -0.07
CHMP2A-201ENST00000312547 RBM19Q9Y4C8 960 aaKnown RBP14.63□□□□□ -0.07
CHMP2A-201ENST00000312547 RIPK3Q9Y572 518 aa14.63□□□□□ -0.07
CHMP2A-201ENST00000312547 TBC1D8O95759 1140 aa14.62□□□□□ -0.07
CHMP2A-201ENST00000312547 SCG2P13521 617 aa14.62□□□□□ -0.07
CHMP2A-201ENST00000312547 TAL1P17542 331 aaPredicted RBP14.62□□□□□ -0.07
CHMP2A-201ENST00000312547 HMGN5P82970 282 aaKnown RBP14.62□□□□□ -0.07
CHMP2A-201ENST00000312547 AKAP17AQ02040 695 aaKnown RBP14.62□□□□□ -0.07
CHMP2A-201ENST00000312547 NOM1Q5C9Z4 860 aaKnown RBP14.62□□□□□ -0.07
CHMP2A-201ENST00000312547 WWC2Q6AWC2 1192 aa14.62□□□□□ -0.07
CHMP2A-201ENST00000312547 SNRNP48Q6IEG0 339 aaKnown RBP14.62□□□□□ -0.07
CHMP2A-201ENST00000312547 CPXCR1Q8N123 301 aa14.62□□□□□ -0.07
CHMP2A-201ENST00000312547 SHCBP1Q8NEM2 672 aa14.62□□□□□ -0.07
CHMP2A-201ENST00000312547 PRDM10Q9NQV6 1147 aa14.62□□□□□ -0.07
CHMP2A-201ENST00000312547 CCPG1Q9ULG6 757 aa14.62□□□□□ -0.07
CHMP2A-201ENST00000312547 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.62□□□□□ -0.07
CHMP2A-201ENST00000312547 CTDP1Q9Y5B0 961 aaPredicted RBP14.62□□□□□ -0.07
CHMP2A-201ENST00000312547 hCG_1984214I3L0E3 225 aa14.61□□□□□ -0.07
CHMP2A-201ENST00000312547 SLC25A27O95847 323 aa14.61□□□□□ -0.07
CHMP2A-201ENST00000312547 TRAF1Q13077 416 aa14.61□□□□□ -0.07
CHMP2A-201ENST00000312547 BECN1Q14457 450 aa14.61□□□□□ -0.07
CHMP2A-201ENST00000312547 PLS1Q14651 629 aa14.61□□□□□ -0.07
CHMP2A-201ENST00000312547 TKFCQ3LXA3 575 aa14.61□□□□□ -0.07
CHMP2A-201ENST00000312547 TYW1BQ6NUM6 668 aa14.61□□□□□ -0.07
CHMP2A-201ENST00000312547 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.61□□□□□ -0.07
CHMP2A-201ENST00000312547 ZNF713Q8N859 430 aaPredicted RBP14.61□□□□□ -0.07
CHMP2A-201ENST00000312547 SHISA4Q96DD7 197 aa14.61□□□□□ -0.07
CHMP2A-201ENST00000312547 DDX11Q96FC9 970 aa14.61□□□□□ -0.07
CHMP2A-201ENST00000312547 PORCNQ9H237 461 aa14.61□□□□□ -0.07
CHMP2A-201ENST00000312547 BARHL2Q9NY43 387 aa14.61□□□□□ -0.07
CHMP2A-201ENST00000312547 PCDHA1Q9Y5I3 950 aa14.61□□□□□ -0.07
CHMP2A-201ENST00000312547 ABCB11O95342 1321 aa14.61□□□□□ -0.07
CHMP2A-201ENST00000312547 TNRC18O15417 2968 aaPredicted RBP14.61□□□□□ -0.07
CHMP2A-201ENST00000312547 CASP8AP2Q9UKL3 1982 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms