RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 VCPKMTQ9H867 229 aa9.57□□□□□ -0.88
CHD6-201ENST00000309279 CLIP2Q9UDT6 1046 aa9.57□□□□□ -0.88
CHD6-201ENST00000309279 STX8Q9UNK0 236 aa9.57□□□□□ -0.88
CHD6-201ENST00000309279 SLC45A1Q9Y2W3 748 aa9.57□□□□□ -0.88
CHD6-201ENST00000309279 SNX14Q9Y5W7 946 aa9.57□□□□□ -0.88
CHD6-201ENST00000309279 ALDH1A1P00352 501 aa9.56□□□□□ -0.88
CHD6-201ENST00000309279 HOXA7P31268 230 aaPredicted RBP9.56□□□□□ -0.88
CHD6-201ENST00000309279 ANTXR2P58335 489 aa9.56□□□□□ -0.88
CHD6-201ENST00000309279 COL9A3Q14050 684 aaPredicted RBP9.56□□□□□ -0.88
CHD6-201ENST00000309279 SEC23AQ15436 765 aa9.56□□□□□ -0.88
CHD6-201ENST00000309279 KIAA1755Q5JYT7 1200 aa9.56□□□□□ -0.88
CHD6-201ENST00000309279 OTUD7BQ6GQQ9 843 aa9.56□□□□□ -0.88
CHD6-201ENST00000309279 RPUSD2Q8IZ73 545 aaKnown RBP9.56□□□□□ -0.88
CHD6-201ENST00000309279 FAM43AQ8N2R8 423 aa9.56□□□□□ -0.88
CHD6-201ENST00000309279 ENAHQ8N8S7 591 aaPredicted RBP9.56□□□□□ -0.88
CHD6-201ENST00000309279 GMCL1P1Q8NEA9 526 aa9.56□□□□□ -0.88
CHD6-201ENST00000309279 LPAR1Q92633 364 aa9.56□□□□□ -0.88
CHD6-201ENST00000309279 NEK1Q96PY6 1258 aa9.56□□□□□ -0.88
CHD6-201ENST00000309279 FEZ1Q99689 392 aa9.56□□□□□ -0.88
CHD6-201ENST00000309279 CFHR5Q9BXR6 569 aa9.56□□□□□ -0.88
CHD6-201ENST00000309279 TANGO6Q9C0B7 1094 aa9.56□□□□□ -0.88
CHD6-201ENST00000309279 SPC25Q9HBM1 224 aa9.56□□□□□ -0.88
CHD6-201ENST00000309279 WBP1LQ9NX94 342 aa9.56□□□□□ -0.88
CHD6-201ENST00000309279 TMOD4Q9NZQ9 345 aa9.56□□□□□ -0.88
CHD6-201ENST00000309279 AGTPBP1Q9UPW5 1226 aa9.56□□□□□ -0.88
CHD6-201ENST00000309279 COL4A3BPQ9Y5P4 624 aa9.56□□□□□ -0.88
CHD6-201ENST00000309279 WDR19Q8NEZ3 1342 aa9.56□□□□□ -0.88
CHD6-201ENST00000309279 F5H6K3 240 aa9.56□□□□□ -0.88
CHD6-201ENST00000309279 C7P10643 843 aa9.56□□□□□ -0.88
CHD6-201ENST00000309279 VDRP11473 427 aa9.56□□□□□ -0.88
CHD6-201ENST00000309279 VCAM1P19320 739 aa9.56□□□□□ -0.88
CHD6-201ENST00000309279 MCM5P33992 734 aa9.56□□□□□ -0.88
CHD6-201ENST00000309279 EXOSC10Q01780 885 aaKnown RBP9.56□□□□□ -0.88
CHD6-201ENST00000309279 ATP2B2Q01814 1243 aa9.56□□□□□ -0.88
CHD6-201ENST00000309279 KLRC3Q07444 240 aa9.56□□□□□ -0.88
CHD6-201ENST00000309279 DGKZQ13574 1117 aa9.56□□□□□ -0.88
CHD6-201ENST00000309279 TREML2Q5T2D2 321 aa9.56□□□□□ -0.88
CHD6-201ENST00000309279 IGDCC4Q8TDY8 1250 aa9.56□□□□□ -0.88
CHD6-201ENST00000309279 TMEM47Q9BQJ4 181 aa9.56□□□□□ -0.88
CHD6-201ENST00000309279 ZKSCAN3Q9BRR0 538 aa9.56□□□□□ -0.88
CHD6-201ENST00000309279 BACH2Q9BYV9 841 aa9.56□□□□□ -0.88
CHD6-201ENST00000309279 SCINQ9Y6U3 715 aa9.56□□□□□ -0.88
CHD6-201ENST00000309279 RLFQ13129 1914 aa9.55□□□□□ -0.88
CHD6-201ENST00000309279 TNKSO95271 1327 aa9.55□□□□□ -0.88
CHD6-201ENST00000309279 PDHXO00330 501 aa9.55□□□□□ -0.88
CHD6-201ENST00000309279 TOP1P11387 765 aaKnown RBP9.55□□□□□ -0.88
CHD6-201ENST00000309279 PSMA5P28066 241 aa9.55□□□□□ -0.88
CHD6-201ENST00000309279 MLLT3P42568 568 aaPredicted RBP9.55□□□□□ -0.88
CHD6-201ENST00000309279 ZYXQ15942 572 aaKnown RBP9.55□□□□□ -0.88
CHD6-201ENST00000309279 GADL1Q6ZQY3 521 aa9.55□□□□□ -0.88
CHD6-201ENST00000309279 DHX32Q7L7V1 743 aaKnown RBP9.55□□□□□ -0.88
CHD6-201ENST00000309279 FBXL16Q8N461 479 aa9.55□□□□□ -0.88
CHD6-201ENST00000309279 DHX38Q92620 1227 aaKnown RBP9.55□□□□□ -0.88
CHD6-201ENST00000309279 TMEM87BQ96K49 555 aa9.55□□□□□ -0.88
CHD6-201ENST00000309279 CEP63Q96MT8 703 aa9.55□□□□□ -0.88
CHD6-201ENST00000309279 UBAC1Q9BSL1 405 aa9.55□□□□□ -0.88
CHD6-201ENST00000309279 TM6SF1Q9BZW5 370 aa9.55□□□□□ -0.88
CHD6-201ENST00000309279 RNF186Q9NXI6 227 aa9.55□□□□□ -0.88
CHD6-201ENST00000309279 SAGE1Q9NXZ1 904 aa9.55□□□□□ -0.88
CHD6-201ENST00000309279 CTDP1Q9Y5B0 961 aaPredicted RBP9.55□□□□□ -0.88
CHD6-201ENST00000309279 PARP14Q460N5 1801 aa9.54□□□□□ -0.88
CHD6-201ENST00000309279 WDR46O15213 610 aaKnown RBP9.54□□□□□ -0.88
CHD6-201ENST00000309279 CA12O43570 354 aa9.54□□□□□ -0.88
CHD6-201ENST00000309279 PRC1O43663 620 aa9.54□□□□□ -0.88
CHD6-201ENST00000309279 ATG7O95352 703 aa9.54□□□□□ -0.88
CHD6-201ENST00000309279 NDUFB10O96000 172 aa9.54□□□□□ -0.88
CHD6-201ENST00000309279 HSP90AA1P07900 732 aaKnown RBP9.54□□□□□ -0.88
CHD6-201ENST00000309279 LIFRP42702 1097 aa9.54□□□□□ -0.88
CHD6-201ENST00000309279 MARSP56192 900 aaKnown RBP9.54□□□□□ -0.88
CHD6-201ENST00000309279 PABPC4Q13310 644 aaKnown RBP eCLIP9.54□□□□□ -0.88
CHD6-201ENST00000309279 SART3Q15020 963 aaKnown RBP9.54□□□□□ -0.88
CHD6-201ENST00000309279 CATSPERGQ6ZRH7 1159 aa9.54□□□□□ -0.88
CHD6-201ENST00000309279 CHST3Q7LGC8 479 aa9.54□□□□□ -0.88
CHD6-201ENST00000309279 NT5DC4Q86YG4 428 aa9.54□□□□□ -0.88
CHD6-201ENST00000309279 LRRC47Q8N1G4 583 aaKnown RBP9.54□□□□□ -0.88
CHD6-201ENST00000309279 ENOX1Q8TC92 643 aaKnown RBP9.54□□□□□ -0.88
CHD6-201ENST00000309279 GMCL1Q96IK5 515 aa9.54□□□□□ -0.88
CHD6-201ENST00000309279 JAKMIP1Q96N16 626 aaKnown RBP9.54□□□□□ -0.88
CHD6-201ENST00000309279 RSPH9Q9H1X1 276 aaPredicted RBP9.54□□□□□ -0.88
CHD6-201ENST00000309279 ZSWIM6Q9HCJ5 1215 aa9.54□□□□□ -0.88
CHD6-201ENST00000309279 PUF60Q9UHX1 559 aaKnown RBP9.54□□□□□ -0.88
CHD6-201ENST00000309279 ERICH2A1L162 156 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 USP17L15C9J2P7 530 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 USP17L13C9JLJ4 530 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 USP17L11C9JVI0 530 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 USP17L18D6R9N7 530 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 USP17L22D6RA61 530 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 USP17L17D6RBQ6 530 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 USP17L19D6RCP7 530 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 USP17L20D6RJB6 530 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 IFIT3O14879 490 aaKnown RBP9.53□□□□□ -0.88
CHD6-201ENST00000309279 GPR37O15354 613 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 SNHG28P0DPA3 235 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 USP17L24Q0WX57 530 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 WTAPQ15007 396 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 IFIT1BQ5T764 474 aaKnown RBP9.53□□□□□ -0.88
CHD6-201ENST00000309279 SLFN13Q68D06 897 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 BLOC1S2Q6QNY1 142 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 FMNL3Q8IVF7 1028 aa9.53□□□□□ -0.88
CHD6-201ENST00000309279 SPICE1Q8N0Z3 855 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms