RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 TEX13AQ9BXU3 409 aaPredicted RBP14.6□□□□□ -0.07
TRIM56-201ENST00000306085 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.6□□□□□ -0.07
TRIM56-201ENST00000306085 PLEKHM3Q6ZWE6 761 aa14.6□□□□□ -0.07
TRIM56-201ENST00000306085 SMC5Q8IY18 1101 aa14.6□□□□□ -0.07
TRIM56-201ENST00000306085 SERPINI1Q99574 410 aa14.6□□□□□ -0.07
TRIM56-201ENST00000306085 CCPG1Q9ULG6 757 aa14.6□□□□□ -0.07
TRIM56-201ENST00000306085 IVNS1ABPQ9Y6Y0 642 aa14.6□□□□□ -0.07
TRIM56-201ENST00000306085 TMEM247A6NEH6 219 aa14.6□□□□□ -0.07
TRIM56-201ENST00000306085 KRT4P19013 534 aa14.6□□□□□ -0.07
TRIM56-201ENST00000306085 PPP2R5EQ16537 467 aa14.6□□□□□ -0.07
TRIM56-201ENST00000306085 ZNF449Q6P9G9 518 aa14.6□□□□□ -0.07
TRIM56-201ENST00000306085 DESI2Q9BSY9 194 aa14.6□□□□□ -0.07
TRIM56-201ENST00000306085 UPF3AQ9H1J1 476 aaKnown RBP14.6□□□□□ -0.07
TRIM56-201ENST00000306085 H7C0C1 242 aa14.6□□□□□ -0.07
TRIM56-201ENST00000306085 ATP5OP48047 213 aa14.6□□□□□ -0.07
TRIM56-201ENST00000306085 TMED2Q15363 201 aa14.6□□□□□ -0.07
TRIM56-201ENST00000306085 SESTD1Q86VW0 696 aa14.6□□□□□ -0.07
TRIM56-201ENST00000306085 ARHGEF10LQ9HCE6 1279 aa14.6□□□□□ -0.07
TRIM56-201ENST00000306085 TYW5A2RUC4 315 aaKnown RBP14.6□□□□□ -0.07
TRIM56-201ENST00000306085 PDHA1P08559 390 aa14.6□□□□□ -0.07
TRIM56-201ENST00000306085 SH2D4AQ9H788 454 aa14.6□□□□□ -0.07
TRIM56-201ENST00000306085 PDE1AP54750 535 aa14.59□□□□□ -0.07
TRIM56-201ENST00000306085 KIF19Q2TAC6 998 aa14.59□□□□□ -0.07
TRIM56-201ENST00000306085 ZNF653Q96CK0 615 aa14.59□□□□□ -0.07
TRIM56-201ENST00000306085 ABHD8Q96I13 439 aa14.59□□□□□ -0.07
TRIM56-201ENST00000306085 ZNF202O95125 648 aa14.59□□□□□ -0.07
TRIM56-201ENST00000306085 OCRLQ01968 901 aa14.59□□□□□ -0.07
TRIM56-201ENST00000306085 CCDC184Q52MB2 194 aa14.59□□□□□ -0.07
TRIM56-201ENST00000306085 LZTS1Q9Y250 596 aa14.59□□□□□ -0.07
TRIM56-201ENST00000306085 ANO1Q5XXA6 986 aa14.59□□□□□ -0.07
TRIM56-201ENST00000306085 PHACTR3Q96KR7 559 aa14.59□□□□□ -0.07
TRIM56-201ENST00000306085 G3BP2Q9UN86 482 aaKnown RBP14.59□□□□□ -0.07
TRIM56-201ENST00000306085 RNASELQ05823 741 aaKnown RBP14.59□□□□□ -0.07
TRIM56-201ENST00000306085 HADHQ16836 314 aaKnown RBP14.59□□□□□ -0.07
TRIM56-201ENST00000306085 ATL3Q6DD88 541 aa14.59□□□□□ -0.07
TRIM56-201ENST00000306085 TSC1Q92574 1164 aa14.59□□□□□ -0.07
TRIM56-201ENST00000306085 HEXIM1O94992 359 aaKnown RBP14.59□□□□□ -0.07
TRIM56-201ENST00000306085 HNRNPCP07910 306 aaKnown RBP eCLIP14.59□□□□□ -0.07
TRIM56-201ENST00000306085 BFSP1Q12934 665 aa14.59□□□□□ -0.07
TRIM56-201ENST00000306085 CSRNP1Q96S65 589 aa14.59□□□□□ -0.07
TRIM56-201ENST00000306085 SLC24A3Q9HC58 644 aa14.59□□□□□ -0.07
TRIM56-201ENST00000306085 TRIM42Q8IWZ5 723 aa14.59□□□□□ -0.07
TRIM56-201ENST00000306085 CBX8Q9HC52 389 aa14.59□□□□□ -0.07
TRIM56-201ENST00000306085 RNF113AO15541 343 aaKnown RBP14.59□□□□□ -0.07
TRIM56-201ENST00000306085 ORC4O43929 436 aa14.59□□□□□ -0.07
TRIM56-201ENST00000306085 KRT33BQ14525 404 aa14.59□□□□□ -0.07
TRIM56-201ENST00000306085 ALKBH8Q96BT7 664 aaKnown RBP14.59□□□□□ -0.07
TRIM56-201ENST00000306085 SPOPLQ6IQ16 392 aa14.59□□□□□ -0.07
TRIM56-201ENST00000306085 FGFR1OP2Q9NVK5 253 aa14.59□□□□□ -0.07
TRIM56-201ENST00000306085 HACD3Q9P035 362 aa14.59□□□□□ -0.07
TRIM56-201ENST00000306085 SORBS3O60504 671 aa14.58□□□□□ -0.07
TRIM56-201ENST00000306085 PDE6CP51160 858 aa14.58□□□□□ -0.07
TRIM56-201ENST00000306085 CPP00450 1065 aa14.58□□□□□ -0.07
TRIM56-201ENST00000306085 XRCC5P13010 732 aaKnown RBP14.58□□□□□ -0.07
TRIM56-201ENST00000306085 STAT1P42224 750 aa14.58□□□□□ -0.07
TRIM56-201ENST00000306085 DHX32Q7L7V1 743 aaKnown RBP14.58□□□□□ -0.07
TRIM56-201ENST00000306085 GIPC2Q8TF65 315 aa14.58□□□□□ -0.07
TRIM56-201ENST00000306085 JDP2Q8WYK2 163 aa14.58□□□□□ -0.07
TRIM56-201ENST00000306085 TTI1O43156 1089 aa14.58□□□□□ -0.08
TRIM56-201ENST00000306085 TRPC1P48995 793 aa14.58□□□□□ -0.08
TRIM56-201ENST00000306085 CFAP36Q96G28 342 aa14.58□□□□□ -0.08
TRIM56-201ENST00000306085 CATSPER3Q86XQ3 398 aa14.58□□□□□ -0.08
TRIM56-201ENST00000306085 HIPK4Q8NE63 616 aa14.58□□□□□ -0.08
TRIM56-201ENST00000306085 OTULINQ96BN8 352 aa14.58□□□□□ -0.08
TRIM56-201ENST00000306085 ZSCAN9O15535 394 aaPredicted RBP14.58□□□□□ -0.08
TRIM56-201ENST00000306085 IGHDP01880 384 aa14.58□□□□□ -0.08
TRIM56-201ENST00000306085 SNX29Q8TEQ0 813 aa14.58□□□□□ -0.08
TRIM56-201ENST00000306085 NLRP12P59046 1061 aa14.58□□□□□ -0.08
TRIM56-201ENST00000306085 GUCY2DQ02846 1103 aa14.58□□□□□ -0.08
TRIM56-201ENST00000306085 EFCAB13Q8IY85 973 aa14.58□□□□□ -0.08
TRIM56-201ENST00000306085 BLZF1Q9H2G9 400 aa14.58□□□□□ -0.08
TRIM56-201ENST00000306085 ZNF148Q9UQR1 794 aa14.58□□□□□ -0.08
TRIM56-201ENST00000306085 STK24Q9Y6E0 443 aa14.58□□□□□ -0.08
TRIM56-201ENST00000306085 KDRP35968 1356 aa14.58□□□□□ -0.08
TRIM56-201ENST00000306085 CCDC84Q86UT8 332 aaPredicted RBP14.58□□□□□ -0.08
TRIM56-201ENST00000306085 TPH2Q8IWU9 490 aa14.58□□□□□ -0.08
TRIM56-201ENST00000306085 TRMT44Q8IYL2 757 aaKnown RBP14.58□□□□□ -0.08
TRIM56-201ENST00000306085 NAF1Q96HR8 494 aaKnown RBP14.58□□□□□ -0.08
TRIM56-201ENST00000306085 ZNF408Q9H9D4 720 aa14.58□□□□□ -0.08
TRIM56-201ENST00000306085 CCDC90BQ9GZT6 254 aa14.57□□□□□ -0.08
TRIM56-201ENST00000306085 FAM102BQ5T8I3 360 aa14.57□□□□□ -0.08
TRIM56-201ENST00000306085 TRIM67Q6ZTA4 783 aa14.57□□□□□ -0.08
TRIM56-201ENST00000306085 SMYD3Q9H7B4 428 aa14.57□□□□□ -0.08
TRIM56-201ENST00000306085 AFAP1Q8N556 730 aa14.57□□□□□ -0.08
TRIM56-201ENST00000306085 NFE2L3Q9Y4A8 694 aa14.57□□□□□ -0.08
TRIM56-201ENST00000306085 SLFN14P0C7P3 912 aa14.57□□□□□ -0.08
TRIM56-201ENST00000306085 SF3B3Q15393 1217 aaKnown RBP14.57□□□□□ -0.08
TRIM56-201ENST00000306085 NAA35Q5VZE5 725 aa14.57□□□□□ -0.08
TRIM56-201ENST00000306085 TBK1Q9UHD2 729 aa14.57□□□□□ -0.08
TRIM56-201ENST00000306085 TADA3O75528 432 aa14.57□□□□□ -0.08
TRIM56-201ENST00000306085 CSPG5O95196 566 aa14.57□□□□□ -0.08
TRIM56-201ENST00000306085 B4GALNT2Q8NHY0 566 aa14.57□□□□□ -0.08
TRIM56-201ENST00000306085 WDR91A4D1P6 747 aa14.57□□□□□ -0.08
TRIM56-201ENST00000306085 SNRPA1P09661 255 aaKnown RBP14.57□□□□□ -0.08
TRIM56-201ENST00000306085 NLRP3Q96P20 1036 aa14.57□□□□□ -0.08
TRIM56-201ENST00000306085 BCL2L12Q9HB09 334 aa14.57□□□□□ -0.08
TRIM56-201ENST00000306085 INPP5FQ9Y2H2 1132 aa14.57□□□□□ -0.08
TRIM56-201ENST00000306085 PMLP29590 882 aa14.57□□□□□ -0.08
TRIM56-201ENST00000306085 PIK3CAP42336 1068 aa14.57□□□□□ -0.08
TRIM56-201ENST00000306085 C6orf118Q5T5N4 469 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms