RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 CENPFP49454 3210 aa11.56□□□□□ -0.56
CCDC58-201ENST00000291458 TMEM232C9JQI7 657 aa11.55□□□□□ -0.56
CCDC58-201ENST00000291458 COBLO75128 1261 aa11.55□□□□□ -0.56
CCDC58-201ENST00000291458 BMP3P12645 472 aa11.55□□□□□ -0.56
CCDC58-201ENST00000291458 XRCC5P13010 732 aaKnown RBP11.55□□□□□ -0.56
CCDC58-201ENST00000291458 MCCP23508 829 aa11.55□□□□□ -0.56
CCDC58-201ENST00000291458 STAT3P40763 770 aa11.55□□□□□ -0.56
CCDC58-201ENST00000291458 SLC1A4P43007 532 aa11.55□□□□□ -0.56
CCDC58-201ENST00000291458 MFAP1P55081 439 aaKnown RBP11.55□□□□□ -0.56
CCDC58-201ENST00000291458 ALX1Q15699 326 aa11.55□□□□□ -0.56
CCDC58-201ENST00000291458 ZKSCAN3Q9BRR0 538 aa11.55□□□□□ -0.56
CCDC58-201ENST00000291458 IL17RBQ9NRM6 502 aa11.55□□□□□ -0.56
CCDC58-201ENST00000291458 PCDH10Q9P2E7 1040 aa11.55□□□□□ -0.56
CCDC58-201ENST00000291458 MCM3APO60318 1980 aa11.55□□□□□ -0.56
CCDC58-201ENST00000291458 HIP1O00291 1037 aa11.54□□□□□ -0.56
CCDC58-201ENST00000291458 ZBED4O75132 1171 aa11.54□□□□□ -0.56
CCDC58-201ENST00000291458 FCER1AP12319 257 aa11.54□□□□□ -0.56
CCDC58-201ENST00000291458 KCTD2Q14681 263 aa11.54□□□□□ -0.56
CCDC58-201ENST00000291458 CCDC174Q6PII3 467 aa11.54□□□□□ -0.56
CCDC58-201ENST00000291458 MFSD6Q6ZSS7 791 aa11.54□□□□□ -0.56
CCDC58-201ENST00000291458 TRMT44Q8IYL2 757 aaKnown RBP11.54□□□□□ -0.56
CCDC58-201ENST00000291458 GMCL1P1Q8NEA9 526 aa11.54□□□□□ -0.56
CCDC58-201ENST00000291458 SHCBP1Q8NEM2 672 aa11.54□□□□□ -0.56
CCDC58-201ENST00000291458 REPS2Q8NFH8 660 aa11.54□□□□□ -0.56
CCDC58-201ENST00000291458 PAWRQ96IZ0 340 aaKnown RBP11.54□□□□□ -0.56
CCDC58-201ENST00000291458 MROH8Q9H579 483 aa11.54□□□□□ -0.56
CCDC58-201ENST00000291458 ANAPC4Q9UJX5 808 aa11.54□□□□□ -0.56
CCDC58-201ENST00000291458 ZNF214Q9UL59 606 aaPredicted RBP11.54□□□□□ -0.56
CCDC58-201ENST00000291458 ZMYM6O95789 1325 aa11.54□□□□□ -0.56
CCDC58-201ENST00000291458 ORC4O43929 436 aa11.53□□□□□ -0.56
CCDC58-201ENST00000291458 SLC25A27O95847 323 aa11.53□□□□□ -0.56
CCDC58-201ENST00000291458 STAT2P52630 851 aa11.53□□□□□ -0.56
CCDC58-201ENST00000291458 PRAMEF19Q5SWL8 479 aa11.53□□□□□ -0.56
CCDC58-201ENST00000291458 AKNAD1Q5T1N1 836 aa11.53□□□□□ -0.56
CCDC58-201ENST00000291458 MAP3K21Q5TCX8 1036 aa11.53□□□□□ -0.56
CCDC58-201ENST00000291458 RIOX2Q8IUF8 465 aa11.53□□□□□ -0.56
CCDC58-201ENST00000291458 TRPV1Q8NER1 839 aa11.53□□□□□ -0.56
CCDC58-201ENST00000291458 OXER1Q8TDS5 423 aa11.53□□□□□ -0.56
CCDC58-201ENST00000291458 HTATIP2Q9BUP3 242 aa11.53□□□□□ -0.56
CCDC58-201ENST00000291458 TEX13BQ9BXU2 312 aa11.53□□□□□ -0.56
CCDC58-201ENST00000291458 GPCPD1Q9NPB8 672 aa11.53□□□□□ -0.56
CCDC58-201ENST00000291458 FEM1BQ9UK73 627 aa11.53□□□□□ -0.56
CCDC58-201ENST00000291458 B4E1Z4 1266 aa11.52□□□□□ -0.57
CCDC58-201ENST00000291458 H0YGN5 161 aa11.52□□□□□ -0.57
CCDC58-201ENST00000291458 ZNF213O14771 459 aa11.52□□□□□ -0.57
CCDC58-201ENST00000291458 KDM4AO75164 1064 aa11.52□□□□□ -0.57
CCDC58-201ENST00000291458 SLC16A2P36021 539 aa11.52□□□□□ -0.57
CCDC58-201ENST00000291458 TTBK2Q6IQ55 1244 aa11.52□□□□□ -0.57
CCDC58-201ENST00000291458 C7orf61Q8IZ16 206 aa11.52□□□□□ -0.57
CCDC58-201ENST00000291458 PRPF38AQ8NAV1 312 aaKnown RBP11.52□□□□□ -0.57
CCDC58-201ENST00000291458 STAG1Q8WVM7 1258 aa11.52□□□□□ -0.57
CCDC58-201ENST00000291458 MKL1Q969V6 931 aa11.52□□□□□ -0.57
CCDC58-201ENST00000291458 TMEM47Q9BQJ4 181 aa11.52□□□□□ -0.57
CCDC58-201ENST00000291458 SLC5A4Q9NY91 659 aa11.52□□□□□ -0.57
CCDC58-201ENST00000291458 ADAMTS5Q9UNA0 930 aa11.52□□□□□ -0.57
CCDC58-201ENST00000291458 RIPK3Q9Y572 518 aa11.52□□□□□ -0.57
CCDC58-201ENST00000291458 SMCHD1A6NHR9 2005 aa11.52□□□□□ -0.57
CCDC58-201ENST00000291458 HOXC6P09630 235 aa11.51□□□□□ -0.57
CCDC58-201ENST00000291458 CYBAP13498 195 aa11.51□□□□□ -0.57
CCDC58-201ENST00000291458 IMMTQ16891 758 aaKnown RBP11.51□□□□□ -0.57
CCDC58-201ENST00000291458 PPP4R3BQ5MIZ7 849 aa11.51□□□□□ -0.57
CCDC58-201ENST00000291458 NECAB2Q7Z6G3 386 aa11.51□□□□□ -0.57
CCDC58-201ENST00000291458 UBE2Q1Q7Z7E8 422 aa11.51□□□□□ -0.57
CCDC58-201ENST00000291458 ESR2Q92731 530 aa11.51□□□□□ -0.57
CCDC58-201ENST00000291458 LENG1Q96BZ8 264 aaPredicted RBP11.51□□□□□ -0.57
CCDC58-201ENST00000291458 DDX11Q96FC9 970 aa11.51□□□□□ -0.57
CCDC58-201ENST00000291458 GMCL1Q96IK5 515 aa11.51□□□□□ -0.57
CCDC58-201ENST00000291458 MAML3Q96JK9 1138 aa11.51□□□□□ -0.57
CCDC58-201ENST00000291458 AGBL1Q96MI9 1066 aa11.51□□□□□ -0.57
CCDC58-201ENST00000291458 RNF41Q9H4P4 317 aaPredicted RBP11.51□□□□□ -0.57
CCDC58-201ENST00000291458 C11orf49Q9H6J7 331 aa11.51□□□□□ -0.57
CCDC58-201ENST00000291458 DDX20Q9UHI6 824 aaKnown RBP11.51□□□□□ -0.57
CCDC58-201ENST00000291458 PCDHGA4Q9Y5G9 962 aa11.51□□□□□ -0.57
CCDC58-201ENST00000291458 MYH6P13533 1939 aa11.5□□□□□ -0.57
CCDC58-201ENST00000291458 STRNO43815 780 aa11.5□□□□□ -0.57
CCDC58-201ENST00000291458 ST18O60284 1047 aa11.5□□□□□ -0.57
CCDC58-201ENST00000291458 EVI5O60447 810 aa11.5□□□□□ -0.57
CCDC58-201ENST00000291458 TOP1P11387 765 aaKnown RBP11.5□□□□□ -0.57
CCDC58-201ENST00000291458 ALAS1P13196 640 aa11.5□□□□□ -0.57
CCDC58-201ENST00000291458 CHMLP26374 656 aa11.5□□□□□ -0.57
CCDC58-201ENST00000291458 COPB2P35606 906 aa11.5□□□□□ -0.57
CCDC58-201ENST00000291458 OLFML2BQ68BL8 750 aa11.5□□□□□ -0.57
CCDC58-201ENST00000291458 GPR153Q6NV75 609 aa11.5□□□□□ -0.57
CCDC58-201ENST00000291458 FAM160B2Q86V87 743 aa11.5□□□□□ -0.57
CCDC58-201ENST00000291458 ANKRD35Q8N283 1001 aa11.5□□□□□ -0.57
CCDC58-201ENST00000291458 DCAF4Q8WV16 495 aa11.5□□□□□ -0.57
CCDC58-201ENST00000291458 DSCC1Q9BVC3 393 aa11.5□□□□□ -0.57
CCDC58-201ENST00000291458 CPVLQ9H3G5 476 aa11.5□□□□□ -0.57
CCDC58-201ENST00000291458 SLC38A10Q9HBR0 1119 aa11.5□□□□□ -0.57
CCDC58-201ENST00000291458 RNF146Q9NTX7 359 aa11.5□□□□□ -0.57
CCDC58-201ENST00000291458 ZHX1Q9UKY1 873 aaPredicted RBP11.5□□□□□ -0.57
CCDC58-201ENST00000291458 OGDHLQ9ULD0 1010 aa11.5□□□□□ -0.57
CCDC58-201ENST00000291458 PRR12Q9ULL5 1215 aa11.5□□□□□ -0.57
CCDC58-201ENST00000291458 ZMYND8Q9ULU4 1186 aaPredicted RBP11.5□□□□□ -0.57
CCDC58-201ENST00000291458 ARIH1Q9Y4X5 557 aaPredicted RBP11.5□□□□□ -0.57
CCDC58-201ENST00000291458 LCTP09848 1927 aa11.5□□□□□ -0.57
CCDC58-201ENST00000291458 LRRC37A2A6NM11 1700 aa11.49□□□□□ -0.57
CCDC58-201ENST00000291458 BRCA2P51587 3418 aa11.49□□□□□ -0.57
CCDC58-201ENST00000291458 FGRP09769 529 aa11.49□□□□□ -0.57
CCDC58-201ENST00000291458 GOLGA8HP0CJ92 632 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms