RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 PEX10O60683 326 aa25.21■■□□□ 1.63
PDLIM3-203ENST00000284771 AOC2O75106 756 aa25.21■■□□□ 1.63
PDLIM3-203ENST00000284771 CYP2C8P10632 490 aa25.21■■□□□ 1.63
PDLIM3-203ENST00000284771 TAL1P17542 331 aaPredicted RBP25.21■■□□□ 1.63
PDLIM3-203ENST00000284771 FAM184AQ8NB25 1140 aa25.21■■□□□ 1.63
PDLIM3-203ENST00000284771 REPS2Q8NFH8 660 aa25.21■■□□□ 1.63
PDLIM3-203ENST00000284771 ALG1Q9BT22 464 aa25.21■■□□□ 1.63
PDLIM3-203ENST00000284771 MYPNQ86TC9 1320 aa25.2■■□□□ 1.63
PDLIM3-203ENST00000284771 KIF23Q02241 960 aaPredicted RBP25.2■■□□□ 1.63
PDLIM3-203ENST00000284771 WWC2Q6AWC2 1192 aa25.2■■□□□ 1.63
PDLIM3-203ENST00000284771 RBM27Q9P2N5 1060 aaKnown RBP25.2■■□□□ 1.63
PDLIM3-203ENST00000284771 SEC63Q9UGP8 760 aaKnown RBP25.2■■□□□ 1.63
PDLIM3-203ENST00000284771 SLC45A1Q9Y2W3 748 aa25.2■■□□□ 1.63
PDLIM3-203ENST00000284771 IRX3P78415 501 aaPredicted RBP25.2■■□□□ 1.62
PDLIM3-203ENST00000284771 OTUD7BQ6GQQ9 843 aa25.2■■□□□ 1.62
PDLIM3-203ENST00000284771 CCDC174Q6PII3 467 aa25.2■■□□□ 1.62
PDLIM3-203ENST00000284771 COA7Q96BR5 231 aa25.2■■□□□ 1.62
PDLIM3-203ENST00000284771 CWC22Q9HCG8 908 aaKnown RBP25.2■■□□□ 1.62
PDLIM3-203ENST00000284771 TM4SF4P48230 202 aa25.19■■□□□ 1.62
PDLIM3-203ENST00000284771 FOSBP53539 338 aa25.19■■□□□ 1.62
PDLIM3-203ENST00000284771 HERVK_113P62684 666 aa25.19■■□□□ 1.62
PDLIM3-203ENST00000284771 PABPC4Q13310 644 aaKnown RBP eCLIP25.19■■□□□ 1.62
PDLIM3-203ENST00000284771 LARP1BQ659C4 914 aaKnown RBP25.19■■□□□ 1.62
PDLIM3-203ENST00000284771 VPS54Q9P1Q0 977 aa25.19■■□□□ 1.62
PDLIM3-203ENST00000284771 SYT1P21579 422 aa25.18■■□□□ 1.62
PDLIM3-203ENST00000284771 INHBEP58166 350 aa25.18■■□□□ 1.62
PDLIM3-203ENST00000284771 C1QTNF8P60827 252 aa25.18■■□□□ 1.62
PDLIM3-203ENST00000284771 NOGQ13253 232 aa25.18■■□□□ 1.62
PDLIM3-203ENST00000284771 PKP1Q13835 747 aa25.18■■□□□ 1.62
PDLIM3-203ENST00000284771 TMEM132BQ14DG7 1078 aa25.18■■□□□ 1.62
PDLIM3-203ENST00000284771 LBX2Q6XYB7 198 aa25.18■■□□□ 1.62
PDLIM3-203ENST00000284771 HEATR3Q7Z4Q2 680 aa25.18■■□□□ 1.62
PDLIM3-203ENST00000284771 IFNL1Q8IU54 200 aa25.18■■□□□ 1.62
PDLIM3-203ENST00000284771 AGBL1Q96MI9 1066 aa25.18■■□□□ 1.62
PDLIM3-203ENST00000284771 STXBP3O00186 592 aa25.17■■□□□ 1.62
PDLIM3-203ENST00000284771 OSBPP22059 807 aa25.17■■□□□ 1.62
PDLIM3-203ENST00000284771 RAVER2Q9HCJ3 691 aaKnown RBP25.17■■□□□ 1.62
PDLIM3-203ENST00000284771 BARHL2Q9NY43 387 aa25.17■■□□□ 1.62
PDLIM3-203ENST00000284771 BTBD7Q9P203 1132 aa25.17■■□□□ 1.62
PDLIM3-203ENST00000284771 ZNF214Q9UL59 606 aaPredicted RBP25.17■■□□□ 1.62
PDLIM3-203ENST00000284771 A0A0G2JMZ2 1700 aa25.17■■□□□ 1.62
PDLIM3-203ENST00000284771 VEGFBP49765 207 aa25.17■■□□□ 1.62
PDLIM3-203ENST00000284771 FBXO11Q86XK2 927 aa25.17■■□□□ 1.62
PDLIM3-203ENST00000284771 CPXCR1Q8N123 301 aa25.17■■□□□ 1.62
PDLIM3-203ENST00000284771 WASF1Q92558 559 aa25.17■■□□□ 1.62
PDLIM3-203ENST00000284771 TXNRD2Q9NNW7 524 aa25.17■■□□□ 1.62
PDLIM3-203ENST00000284771 RBPJLQ9UBG7 517 aa25.17■■□□□ 1.62
PDLIM3-203ENST00000284771 WDR33Q9C0J8 1336 aaKnown RBP25.16■■□□□ 1.62
PDLIM3-203ENST00000284771 ZBED4O75132 1171 aa25.16■■□□□ 1.62
PDLIM3-203ENST00000284771 CNMDO75829 334 aa25.16■■□□□ 1.62
PDLIM3-203ENST00000284771 ICAM1P05362 532 aa25.16■■□□□ 1.62
PDLIM3-203ENST00000284771 FDX1P10109 184 aa25.16■■□□□ 1.62
PDLIM3-203ENST00000284771 USH1GQ495M9 461 aa25.16■■□□□ 1.62
PDLIM3-203ENST00000284771 FBXO18Q8NFZ0 1043 aa25.16■■□□□ 1.62
PDLIM3-203ENST00000284771 AMNQ9BXJ7 453 aa25.16■■□□□ 1.62
PDLIM3-203ENST00000284771 KCNJ14Q9UNX9 436 aa25.16■■□□□ 1.62
PDLIM3-203ENST00000284771 PCDHA1Q9Y5I3 950 aa25.16■■□□□ 1.62
PDLIM3-203ENST00000284771 ADAMTS3O15072 1205 aa25.15■■□□□ 1.62
PDLIM3-203ENST00000284771 GUCY1B3Q02153 619 aa25.15■■□□□ 1.62
PDLIM3-203ENST00000284771 C8orf76Q96K31 380 aa25.15■■□□□ 1.62
PDLIM3-203ENST00000284771 PNMA3Q9UL41 463 aa25.15■■□□□ 1.62
PDLIM3-203ENST00000284771 RIPK3Q9Y572 518 aa25.15■■□□□ 1.62
PDLIM3-203ENST00000284771 SREBF2Q12772 1141 aa25.14■■□□□ 1.62
PDLIM3-203ENST00000284771 NPY5RQ15761 445 aa25.14■■□□□ 1.62
PDLIM3-203ENST00000284771 KRT40Q6A162 431 aa25.14■■□□□ 1.62
PDLIM3-203ENST00000284771 ATP2A1O14983 1001 aa25.13■■□□□ 1.61
PDLIM3-203ENST00000284771 HSPA6P17066 643 aa25.13■■□□□ 1.61
PDLIM3-203ENST00000284771 Q3C1V9 767 aa25.13■■□□□ 1.61
PDLIM3-203ENST00000284771 SH3GLB2Q9NR46 395 aa25.13■■□□□ 1.61
PDLIM3-203ENST00000284771 KIF3AQ9Y496 699 aa25.13■■□□□ 1.61
PDLIM3-203ENST00000284771 OPLAHO14841 1288 aa25.13■■□□□ 1.61
PDLIM3-203ENST00000284771 PHF20Q9BVI0 1012 aa25.13■■□□□ 1.61
PDLIM3-203ENST00000284771 ZCCHC17Q9NP64 241 aaKnown RBP25.13■■□□□ 1.61
PDLIM3-203ENST00000284771 hCG_1984214I3L0E3 225 aa25.12■■□□□ 1.61
PDLIM3-203ENST00000284771 STX6O43752 255 aa25.12■■□□□ 1.61
PDLIM3-203ENST00000284771 PDCP20941 246 aa25.12■■□□□ 1.61
PDLIM3-203ENST00000284771 OAZ1P54368 228 aa25.12■■□□□ 1.61
PDLIM3-203ENST00000284771 NAPAP54920 295 aa25.12■■□□□ 1.61
PDLIM3-203ENST00000284771 ZNF713Q8N859 430 aaPredicted RBP25.12■■□□□ 1.61
PDLIM3-203ENST00000284771 MB21D1Q8N884 522 aa25.12■■□□□ 1.61
PDLIM3-203ENST00000284771 SMCR8Q8TEV9 937 aaPredicted RBP25.12■■□□□ 1.61
PDLIM3-203ENST00000284771 PAGR1Q9BTK6 254 aa25.12■■□□□ 1.61
PDLIM3-203ENST00000284771 R3HDMLQ9H3Y0 253 aa25.12■■□□□ 1.61
PDLIM3-203ENST00000284771 CCPG1Q9ULG6 757 aa25.12■■□□□ 1.61
PDLIM3-203ENST00000284771 MTMR6Q9Y217 621 aa25.12■■□□□ 1.61
PDLIM3-203ENST00000284771 ZDHHC9Q9Y397 364 aa25.12■■□□□ 1.61
PDLIM3-203ENST00000284771 CEP350Q5VT06 3117 aa25.12■■□□□ 1.61
PDLIM3-203ENST00000284771 PARK7Q99497 189 aaKnown RBP25.11■■□□□ 1.61
PDLIM3-203ENST00000284771 ZMYND12Q9H0C1 365 aa25.11■■□□□ 1.61
PDLIM3-203ENST00000284771 STAT3P40763 770 aa25.1■■□□□ 1.61
PDLIM3-203ENST00000284771 SNRNP48Q6IEG0 339 aaKnown RBP25.1■■□□□ 1.61
PDLIM3-203ENST00000284771 RABGAP1Q9Y3P9 1069 aa25.1■■□□□ 1.61
PDLIM3-203ENST00000284771 CTDP1Q9Y5B0 961 aaPredicted RBP25.1■■□□□ 1.61
PDLIM3-203ENST00000284771 ADGRA2Q96PE1 1338 aa25.1■■□□□ 1.61
PDLIM3-203ENST00000284771 SMCO2A6NFE2 343 aa25.1■■□□□ 1.61
PDLIM3-203ENST00000284771 MMP1P03956 469 aa25.1■■□□□ 1.61
PDLIM3-203ENST00000284771 PLS1Q14651 629 aa25.1■■□□□ 1.61
PDLIM3-203ENST00000284771 TAF1CQ15572 869 aaPredicted RBP25.1■■□□□ 1.61
PDLIM3-203ENST00000284771 OXER1Q8TDS5 423 aa25.1■■□□□ 1.61
PDLIM3-203ENST00000284771 TEX13BQ9BXU2 312 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms