RNA–Protein interactions for RNA: ENST00000279052.10

ERGIC3-201, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 2,846 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-201ENST00000279052 ZC3H13Q5T200 1668 aaKnown RBP11.74□□□□□ -0.53
ERGIC3-201ENST00000279052 GRAMD4Q6IC98 578 aa11.74□□□□□ -0.53
ERGIC3-201ENST00000279052 C3orf67Q6ZVT6 689 aa11.74□□□□□ -0.53
ERGIC3-201ENST00000279052 USP32Q8NFA0 1604 aa11.74□□□□□ -0.53
ERGIC3-201ENST00000279052 AGAP11Q8TF27 550 aa11.74□□□□□ -0.53
ERGIC3-201ENST00000279052 SRPK1Q96SB4 655 aaKnown RBP11.74□□□□□ -0.53
ERGIC3-201ENST00000279052 OSBPL7Q9BZF2 842 aa11.74□□□□□ -0.53
ERGIC3-201ENST00000279052 IKBKGQ9Y6K9 419 aa11.74□□□□□ -0.53
ERGIC3-201ENST00000279052 PRC1O43663 620 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 FAM107AO95990 144 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 LSP1P33241 339 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 CCDC153Q494R4 210 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 ALS2CLQ60I27 953 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 ANO7Q6IWH7 933 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 ARHGEF25Q86VW2 580 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 NLRP14Q86W24 1093 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 CCT8L2Q96SF2 557 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 AASDHPPTQ9NRN7 309 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 LGR5O75473 907 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 TOP1P11387 765 aaKnown RBP11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 VARSP26640 1264 aaKnown RBP11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 PDE6CP51160 858 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 CTAG1AP78358 180 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 LRP8Q14114 963 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 ATL3Q6DD88 541 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 ZNF804AQ7Z570 1209 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 MIGA1Q8NAN2 632 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 C1orf131Q8NDD1 294 aaKnown RBP11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 EHBP1Q8NDI1 1231 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 MYCBPAPQ8TBZ2 947 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 CGREF1Q99674 301 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 SYT15Q9BQS2 421 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 RMND1Q9NWS8 449 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 CTAGE15A4D2H0 777 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 GSTA2P09210 222 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 POTEIP0CG38 1075 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 CTAGE8P0CG41 777 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 SP100P23497 879 aaPredicted RBP11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 TMPOP42166 694 aaKnown RBP11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 TUBP50607 506 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 SAFBQ15424 915 aaKnown RBP eCLIP11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 PPP1R7Q15435 360 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 GKAP1Q5VSY0 366 aaPredicted RBP11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 NEPROQ6NW34 567 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 CTAGE6Q86UF2 777 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 PALB2Q86YC2 1186 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 CTAGE4Q8IX94 777 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 ZNF713Q8N859 430 aaPredicted RBP11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 APPBP2Q92624 585 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 VMP1Q96GC9 406 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 SPATA32Q96LK8 384 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 CEP295NLQ96MC4 621 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 GGNBP2Q9H3C7 697 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 CHPF2Q9P2E5 772 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 LNPEPQ9UIQ6 1025 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 CHMP3Q9Y3E7 222 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 SLC30A1Q9Y6M5 507 aa11.73□□□□□ -0.53
ERGIC3-201ENST00000279052 KIF24Q5T7B8 1368 aa11.72□□□□□ -0.53
ERGIC3-201ENST00000279052 POTEFA5A3E0 1075 aa11.72□□□□□ -0.53
ERGIC3-201ENST00000279052 RGL2O15211 777 aa11.72□□□□□ -0.53
ERGIC3-201ENST00000279052 ALADP13716 330 aa11.72□□□□□ -0.53
ERGIC3-201ENST00000279052 GEMIN4P57678 1058 aaKnown RBP11.72□□□□□ -0.53
ERGIC3-201ENST00000279052 PDE1BQ01064 536 aa11.72□□□□□ -0.53
ERGIC3-201ENST00000279052 BCL2A1Q16548 175 aa11.72□□□□□ -0.53
ERGIC3-201ENST00000279052 PTGISQ16647 500 aa11.72□□□□□ -0.53
ERGIC3-201ENST00000279052 SPDYCQ5MJ68 293 aa11.72□□□□□ -0.53
ERGIC3-201ENST00000279052 KAZNQ674X7 775 aa11.72□□□□□ -0.53
ERGIC3-201ENST00000279052 C11orf57Q6ZUT1 292 aaPredicted RBP11.72□□□□□ -0.53
ERGIC3-201ENST00000279052 DAAM2Q86T65 1068 aa11.72□□□□□ -0.53
ERGIC3-201ENST00000279052 DCLK2Q8N568 766 aa11.72□□□□□ -0.53
ERGIC3-201ENST00000279052 LINS1Q8NG48 757 aa11.72□□□□□ -0.53
ERGIC3-201ENST00000279052 LRRC45Q96CN5 670 aa11.72□□□□□ -0.53
ERGIC3-201ENST00000279052 DRC3Q9H069 523 aa11.72□□□□□ -0.53
ERGIC3-201ENST00000279052 CARD9Q9H257 536 aa11.72□□□□□ -0.53
ERGIC3-201ENST00000279052 ARHGAP6O43182 974 aa11.72□□□□□ -0.53
ERGIC3-201ENST00000279052 HSPA1AP0DMV8 641 aaKnown RBP11.72□□□□□ -0.53
ERGIC3-201ENST00000279052 HSPA1BP0DMV9 641 aaKnown RBP11.72□□□□□ -0.53
ERGIC3-201ENST00000279052 S100A1P23297 94 aa11.72□□□□□ -0.53
ERGIC3-201ENST00000279052 GSTT1P30711 240 aa11.72□□□□□ -0.53
ERGIC3-201ENST00000279052 KIF11P52732 1056 aa11.72□□□□□ -0.53
ERGIC3-201ENST00000279052 PIP4K2BP78356 416 aa11.72□□□□□ -0.53
ERGIC3-201ENST00000279052 SEPT2Q15019 361 aa11.72□□□□□ -0.53
ERGIC3-201ENST00000279052 CMPK2Q5EBM0 449 aa11.72□□□□□ -0.53
ERGIC3-201ENST00000279052 GSDMAQ96QA5 445 aa11.72□□□□□ -0.53
ERGIC3-201ENST00000279052 SIL1Q9H173 461 aa11.72□□□□□ -0.53
ERGIC3-201ENST00000279052 ZNF304Q9HCX3 659 aa11.72□□□□□ -0.53
ERGIC3-201ENST00000279052 POGZQ7Z3K3 1410 aa11.71□□□□□ -0.53
ERGIC3-201ENST00000279052 GLI2P10070 1586 aa11.71□□□□□ -0.53
ERGIC3-201ENST00000279052 HNRNPRO43390 633 aaKnown RBP11.71□□□□□ -0.53
ERGIC3-201ENST00000279052 EPB41P11171 864 aaKnown RBP11.71□□□□□ -0.53
ERGIC3-201ENST00000279052 TRIM27P14373 513 aa11.71□□□□□ -0.53
ERGIC3-201ENST00000279052 KRT85P78386 507 aa11.71□□□□□ -0.53
ERGIC3-201ENST00000279052 ZNF362Q5T0B9 420 aaPredicted RBP11.71□□□□□ -0.53
ERGIC3-201ENST00000279052 TTC22Q5TAA0 569 aa11.71□□□□□ -0.53
ERGIC3-201ENST00000279052 RNF220Q5VTB9 566 aa11.71□□□□□ -0.53
ERGIC3-201ENST00000279052 WAPLQ7Z5K2 1190 aa11.71□□□□□ -0.53
ERGIC3-201ENST00000279052 DHX40Q8IX18 779 aaKnown RBP11.71□□□□□ -0.53
ERGIC3-201ENST00000279052 SSH1Q8WYL5 1049 aa11.71□□□□□ -0.53
ERGIC3-201ENST00000279052 RNF25Q96BH1 459 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms