RNA–Protein interactions for RNA: ENST00000277010.8

SIGMAR1-201, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIGMAR1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-201ENST00000277010 KIF22Q14807 665 aa26.52■■□□□ 1.84
SIGMAR1-201ENST00000277010 SNRNP48Q6IEG0 339 aaKnown RBP26.52■■□□□ 1.84
SIGMAR1-201ENST00000277010 CCAR1Q8IX12 1150 aaKnown RBP26.52■■□□□ 1.84
SIGMAR1-201ENST00000277010 CCDC82Q8N4S0 544 aa26.52■■□□□ 1.84
SIGMAR1-201ENST00000277010 AGBL1Q96MI9 1066 aa26.52■■□□□ 1.84
SIGMAR1-201ENST00000277010 TPCN1Q9ULQ1 816 aa26.52■■□□□ 1.84
SIGMAR1-201ENST00000277010 ATP2A1O14983 1001 aa26.51■■□□□ 1.83
SIGMAR1-201ENST00000277010 TAL1P17542 331 aaPredicted RBP26.51■■□□□ 1.83
SIGMAR1-201ENST00000277010 CCT2P78371 535 aaKnown RBP26.51■■□□□ 1.83
SIGMAR1-201ENST00000277010 STK3Q13188 491 aa26.51■■□□□ 1.83
SIGMAR1-201ENST00000277010 CDC37Q16543 378 aaPredicted RBP26.51■■□□□ 1.83
SIGMAR1-201ENST00000277010 TMTC3Q6ZXV5 915 aa26.51■■□□□ 1.83
SIGMAR1-201ENST00000277010 ZNF274Q96GC6 653 aaPredicted RBP26.51■■□□□ 1.83
SIGMAR1-201ENST00000277010 TRIM47Q96LD4 638 aa26.51■■□□□ 1.83
SIGMAR1-201ENST00000277010 RIOX1Q9H6W3 641 aa26.51■■□□□ 1.83
SIGMAR1-201ENST00000277010 RBM28Q9NW13 759 aaKnown RBP26.51■■□□□ 1.83
SIGMAR1-201ENST00000277010 RIPK3Q9Y572 518 aa26.51■■□□□ 1.83
SIGMAR1-201ENST00000277010 FMNL1O95466 1100 aaPredicted RBP26.5■■□□□ 1.83
SIGMAR1-201ENST00000277010 ERCC3P19447 782 aa26.5■■□□□ 1.83
SIGMAR1-201ENST00000277010 ADD1P35611 737 aaKnown RBP26.5■■□□□ 1.83
SIGMAR1-201ENST00000277010 OAZ1P54368 228 aa26.5■■□□□ 1.83
SIGMAR1-201ENST00000277010 WDR78Q5VTH9 848 aa26.5■■□□□ 1.83
SIGMAR1-201ENST00000277010 NCAPG2Q86XI2 1143 aa26.5■■□□□ 1.83
SIGMAR1-201ENST00000277010 HOMER1Q86YM7 354 aa26.5■■□□□ 1.83
SIGMAR1-201ENST00000277010 RIOX2Q8IUF8 465 aa26.5■■□□□ 1.83
SIGMAR1-201ENST00000277010 PIBF1Q8WXW3 757 aa26.5■■□□□ 1.83
SIGMAR1-201ENST00000277010 LZTS2Q9BRK4 669 aa26.5■■□□□ 1.83
SIGMAR1-201ENST00000277010 NCOA5Q9HCD5 579 aaKnown RBP26.5■■□□□ 1.83
SIGMAR1-201ENST00000277010 COL11A1P12107 1806 aaPredicted RBP26.5■■□□□ 1.83
SIGMAR1-201ENST00000277010 NID2Q14112 1375 aa26.49■■□□□ 1.83
SIGMAR1-201ENST00000277010 ICAM1P05362 532 aa26.49■■□□□ 1.83
SIGMAR1-201ENST00000277010 MAPK4P31152 587 aa26.49■■□□□ 1.83
SIGMAR1-201ENST00000277010 FCGRTP55899 365 aa26.49■■□□□ 1.83
SIGMAR1-201ENST00000277010 PIGSQ96S52 555 aa26.49■■□□□ 1.83
SIGMAR1-201ENST00000277010 SPZ1Q9BXG8 430 aa26.49■■□□□ 1.83
SIGMAR1-201ENST00000277010 CCPG1Q9ULG6 757 aa26.49■■□□□ 1.83
SIGMAR1-201ENST00000277010 TNPO2O14787 897 aaKnown RBP26.48■■□□□ 1.83
SIGMAR1-201ENST00000277010 QRICH1Q2TAL8 776 aa26.48■■□□□ 1.83
SIGMAR1-201ENST00000277010 MTMR8Q96EF0 704 aa26.48■■□□□ 1.83
SIGMAR1-201ENST00000277010 CWC22Q9HCG8 908 aaKnown RBP26.48■■□□□ 1.83
SIGMAR1-201ENST00000277010 HOMER2Q9NSB8 354 aa26.48■■□□□ 1.83
SIGMAR1-201ENST00000277010 CCDC196A0A1B0GTZ2 297 aa26.47■■□□□ 1.83
SIGMAR1-201ENST00000277010 SLC25A27O95847 323 aa26.47■■□□□ 1.83
SIGMAR1-201ENST00000277010 PPP2R5BQ15173 497 aa26.47■■□□□ 1.83
SIGMAR1-201ENST00000277010 GPR142Q7Z601 462 aa26.47■■□□□ 1.83
SIGMAR1-201ENST00000277010 SHCBP1Q8NEM2 672 aa26.47■■□□□ 1.83
SIGMAR1-201ENST00000277010 ZSWIM8A7E2V4 1837 aa26.47■■□□□ 1.83
SIGMAR1-201ENST00000277010 ALAS1P13196 640 aa26.47■■□□□ 1.83
SIGMAR1-201ENST00000277010 SMARCA1P28370 1054 aa26.47■■□□□ 1.83
SIGMAR1-201ENST00000277010 PRDM10Q9NQV6 1147 aa26.47■■□□□ 1.83
SIGMAR1-201ENST00000277010 CASP8AP2Q9UKL3 1982 aa26.46■■□□□ 1.83
SIGMAR1-201ENST00000277010 ZBTB5O15062 677 aa26.46■■□□□ 1.83
SIGMAR1-201ENST00000277010 LARGE1O95461 756 aa26.46■■□□□ 1.83
SIGMAR1-201ENST00000277010 FUT2Q10981 343 aa26.46■■□□□ 1.83
SIGMAR1-201ENST00000277010 ME3Q16798 604 aa26.46■■□□□ 1.83
SIGMAR1-201ENST00000277010 USH1GQ495M9 461 aa26.46■■□□□ 1.83
SIGMAR1-201ENST00000277010 SLKQ9H2G2 1235 aaPredicted RBP26.46■■□□□ 1.83
SIGMAR1-201ENST00000277010 MROH8Q9H579 483 aa26.46■■□□□ 1.83
SIGMAR1-201ENST00000277010 TRIM17Q9Y577 477 aa26.46■■□□□ 1.83
SIGMAR1-201ENST00000277010 hCG_1642624A0A1W2PR95 340 aa26.45■■□□□ 1.82
SIGMAR1-201ENST00000277010 ST18O60284 1047 aa26.45■■□□□ 1.82
SIGMAR1-201ENST00000277010 PLEKHH3Q7Z736 793 aa26.45■■□□□ 1.82
SIGMAR1-201ENST00000277010 CNTNAP5Q8WYK1 1306 aa26.45■■□□□ 1.82
SIGMAR1-201ENST00000277010 PPP1R11O60927 126 aaPredicted RBP26.44■■□□□ 1.82
SIGMAR1-201ENST00000277010 SCRN1Q12765 414 aa26.44■■□□□ 1.82
SIGMAR1-201ENST00000277010 ARHGEF6Q15052 776 aa26.44■■□□□ 1.82
SIGMAR1-201ENST00000277010 OTOP1Q7RTM1 612 aa26.44■■□□□ 1.82
SIGMAR1-201ENST00000277010 FBXO11Q86XK2 927 aa26.44■■□□□ 1.82
SIGMAR1-201ENST00000277010 COA7Q96BR5 231 aa26.44■■□□□ 1.82
SIGMAR1-201ENST00000277010 RRP36Q96EU6 259 aaKnown RBP26.44■■□□□ 1.82
SIGMAR1-201ENST00000277010 TRERF1Q96PN7 1200 aa26.44■■□□□ 1.82
SIGMAR1-201ENST00000277010 RNF146Q9NTX7 359 aa26.44■■□□□ 1.82
SIGMAR1-201ENST00000277010 PNMA6FA0A0J9YX94 578 aa26.44■■□□□ 1.82
SIGMAR1-201ENST00000277010 PFKFB2O60825 505 aa26.44■■□□□ 1.82
SIGMAR1-201ENST00000277010 PPFIA3O75145 1194 aa26.44■■□□□ 1.82
SIGMAR1-201ENST00000277010 COPB2P35606 906 aa26.44■■□□□ 1.82
SIGMAR1-201ENST00000277010 NECAB1Q8N987 351 aa26.44■■□□□ 1.82
SIGMAR1-201ENST00000277010 LIMCH1Q9UPQ0 1083 aa26.44■■□□□ 1.82
SIGMAR1-201ENST00000277010 IVNS1ABPQ9Y6Y0 642 aa26.44■■□□□ 1.82
SIGMAR1-201ENST00000277010 CD2BP2O95400 341 aaKnown RBP26.43■■□□□ 1.82
SIGMAR1-201ENST00000277010 NTRK3Q16288 839 aa26.43■■□□□ 1.82
SIGMAR1-201ENST00000277010 PRKCZQ05513 592 aa26.42■■□□□ 1.82
SIGMAR1-201ENST00000277010 TKFCQ3LXA3 575 aa26.42■■□□□ 1.82
SIGMAR1-201ENST00000277010 MUM1L1Q5H9M0 696 aa26.42■■□□□ 1.82
SIGMAR1-201ENST00000277010 CHST13Q8NET6 341 aa26.42■■□□□ 1.82
SIGMAR1-201ENST00000277010 PHKBQ93100 1093 aa26.42■■□□□ 1.82
SIGMAR1-201ENST00000277010 AMNQ9BXJ7 453 aa26.42■■□□□ 1.82
SIGMAR1-201ENST00000277010 SEC63Q9UGP8 760 aaKnown RBP26.42■■□□□ 1.82
SIGMAR1-201ENST00000277010 GABRQQ9UN88 632 aa26.42■■□□□ 1.82
SIGMAR1-201ENST00000277010 BAZ2BQ9UIF8 2168 aaKnown RBP26.42■■□□□ 1.82
SIGMAR1-201ENST00000277010 CPLX1O14810 134 aa26.41■■□□□ 1.82
SIGMAR1-201ENST00000277010 PTPREP23469 700 aa26.41■■□□□ 1.82
SIGMAR1-201ENST00000277010 ACAD9Q9H845 621 aa26.41■■□□□ 1.82
SIGMAR1-201ENST00000277010 SRRDQ9UH36 339 aa26.41■■□□□ 1.82
SIGMAR1-201ENST00000277010 PNMA2Q9UL42 364 aa26.41■■□□□ 1.82
SIGMAR1-201ENST00000277010 V9GY48 417 aaPredicted RBP26.41■■□□□ 1.82
SIGMAR1-201ENST00000277010 HTTP42858 3142 aa26.41■■□□□ 1.82
SIGMAR1-201ENST00000277010 GNRH1P01148 92 aa26.41■■□□□ 1.82
SIGMAR1-201ENST00000277010 FCER1AP12319 257 aa26.41■■□□□ 1.82
SIGMAR1-201ENST00000277010 HOXD10P28358 340 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms