RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 ZAP70P43403 619 aa15.66■□□□□ 0.1
CUX2-201ENST00000261726 XKR9Q5GH70 373 aa15.66■□□□□ 0.1
CUX2-201ENST00000261726 ZBTB8OSQ8IWT0 167 aa15.66■□□□□ 0.1
CUX2-201ENST00000261726 NIM1KQ8IY84 436 aa15.66■□□□□ 0.1
CUX2-201ENST00000261726 TEKT1Q969V4 418 aa15.66■□□□□ 0.1
CUX2-201ENST00000261726 DESI2Q9BSY9 194 aa15.66■□□□□ 0.1
CUX2-201ENST00000261726 SUGCTQ9HAC7 445 aa15.66■□□□□ 0.1
CUX2-201ENST00000261726 DLGAP5Q15398 846 aa15.66■□□□□ 0.1
CUX2-201ENST00000261726 RAPH1Q70E73 1250 aa15.66■□□□□ 0.1
CUX2-201ENST00000261726 MYLK4Q86YV6 388 aaPredicted RBP15.66■□□□□ 0.1
CUX2-201ENST00000261726 APOL6Q9BWW8 343 aa15.66■□□□□ 0.1
CUX2-201ENST00000261726 C1orf112Q9NSG2 853 aa15.66■□□□□ 0.1
CUX2-201ENST00000261726 ALAS1P13196 640 aa15.65■□□□□ 0.1
CUX2-201ENST00000261726 HP1BP3Q5SSJ5 553 aaPredicted RBP15.65■□□□□ 0.1
CUX2-201ENST00000261726 GADL1Q6ZQY3 521 aa15.65■□□□□ 0.1
CUX2-201ENST00000261726 NT5C3AQ9H0P0 336 aa15.65■□□□□ 0.1
CUX2-201ENST00000261726 KIF9Q9HAQ2 790 aa15.65■□□□□ 0.1
CUX2-201ENST00000261726 TRIM35Q9UPQ4 493 aa15.65■□□□□ 0.1
CUX2-201ENST00000261726 KDM3AQ9Y4C1 1321 aa15.65■□□□□ 0.1
CUX2-201ENST00000261726 PHACTR3Q96KR7 559 aa15.65■□□□□ 0.1
CUX2-201ENST00000261726 USP40Q9NVE5 1235 aa15.65■□□□□ 0.1
CUX2-201ENST00000261726 KCNA4P22459 653 aa15.65■□□□□ 0.1
CUX2-201ENST00000261726 PANK4Q9NVE7 773 aa15.65■□□□□ 0.1
CUX2-201ENST00000261726 ANAPC5Q9UJX4 755 aa15.65■□□□□ 0.1
CUX2-201ENST00000261726 PTPN22Q9Y2R2 807 aa15.65■□□□□ 0.1
CUX2-201ENST00000261726 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.65■□□□□ 0.1
CUX2-201ENST00000261726 PFDN6O15212 129 aa15.65■□□□□ 0.1
CUX2-201ENST00000261726 SETSIPP0DME0 302 aa15.65■□□□□ 0.1
CUX2-201ENST00000261726 MORC3Q14149 939 aa15.65■□□□□ 0.1
CUX2-201ENST00000261726 TTC19Q6DKK2 380 aaPredicted RBP15.65■□□□□ 0.1
CUX2-201ENST00000261726 XPO4Q9C0E2 1151 aaKnown RBP15.65■□□□□ 0.1
CUX2-201ENST00000261726 THRAP3Q9Y2W1 955 aaKnown RBP15.65■□□□□ 0.1
CUX2-201ENST00000261726 HOXC9P31274 260 aa15.65■□□□□ 0.1
CUX2-201ENST00000261726 ATF2P15336 505 aa15.65■□□□□ 0.1
CUX2-201ENST00000261726 RYBPQ8N488 228 aaPredicted RBP15.65■□□□□ 0.1
CUX2-201ENST00000261726 MORC4Q8TE76 937 aa15.65■□□□□ 0.1
CUX2-201ENST00000261726 EIF2AK4Q9P2K8 1649 aaKnown RBP15.65■□□□□ 0.1
CUX2-201ENST00000261726 IBTKQ9P2D0 1353 aaPredicted RBP15.64■□□□□ 0.09
CUX2-201ENST00000261726 GNPTABQ3T906 1256 aa15.64■□□□□ 0.09
CUX2-201ENST00000261726 Q9H521 79 aa15.64■□□□□ 0.09
CUX2-201ENST00000261726 ANGPTL3Q9Y5C1 460 aa15.64■□□□□ 0.09
CUX2-201ENST00000261726 MYOCDQ8IZQ8 938 aa15.64■□□□□ 0.09
CUX2-201ENST00000261726 LPIN2Q92539 896 aa15.64■□□□□ 0.09
CUX2-201ENST00000261726 H7C0C1 242 aa15.64■□□□□ 0.09
CUX2-201ENST00000261726 GARSP41250 739 aaKnown RBP15.64■□□□□ 0.09
CUX2-201ENST00000261726 ATP5OP48047 213 aa15.64■□□□□ 0.09
CUX2-201ENST00000261726 PDZD4Q76G19 769 aaPredicted RBP15.64■□□□□ 0.09
CUX2-201ENST00000261726 IRAK4Q9NWZ3 460 aa15.64■□□□□ 0.09
CUX2-201ENST00000261726 HIP1RO75146 1068 aa15.64■□□□□ 0.09
CUX2-201ENST00000261726 GCP02774 474 aa15.64■□□□□ 0.09
CUX2-201ENST00000261726 PIK3CAP42336 1068 aa15.64■□□□□ 0.09
CUX2-201ENST00000261726 BFSP1Q12934 665 aa15.64■□□□□ 0.09
CUX2-201ENST00000261726 NAA35Q5VZE5 725 aa15.64■□□□□ 0.09
CUX2-201ENST00000261726 STAG1Q8WVM7 1258 aa15.64■□□□□ 0.09
CUX2-201ENST00000261726 ABCF3Q9NUQ8 709 aa15.64■□□□□ 0.09
CUX2-201ENST00000261726 HESX1Q9UBX0 185 aa15.64■□□□□ 0.09
CUX2-201ENST00000261726 NUB1Q9Y5A7 615 aa15.64■□□□□ 0.09
CUX2-201ENST00000261726 CSADQ9Y600 493 aa15.64■□□□□ 0.09
CUX2-201ENST00000261726 MBD5Q9P267 1494 aa15.64■□□□□ 0.09
CUX2-201ENST00000261726 BANK1Q8NDB2 785 aa15.64■□□□□ 0.09
CUX2-201ENST00000261726 FAF1Q9UNN5 650 aaPredicted RBP15.64■□□□□ 0.09
CUX2-201ENST00000261726 CDC42BPBQ9Y5S2 1711 aa15.64■□□□□ 0.09
CUX2-201ENST00000261726 FRMD3A2A2Y4 597 aa15.63■□□□□ 0.09
CUX2-201ENST00000261726 GCKP35557 465 aa15.63■□□□□ 0.09
CUX2-201ENST00000261726 FOXD4Q12950 439 aaPredicted RBP15.63■□□□□ 0.09
CUX2-201ENST00000261726 ZNF790Q6PG37 636 aa15.63■□□□□ 0.09
CUX2-201ENST00000261726 ADPGKQ9BRR6 497 aa15.63■□□□□ 0.09
CUX2-201ENST00000261726 HOMER3Q9NSC5 361 aa15.63■□□□□ 0.09
CUX2-201ENST00000261726 IPO11Q9UI26 975 aaKnown RBP15.63■□□□□ 0.09
CUX2-201ENST00000261726 CROCC2H7BZ55 1655 aa15.63■□□□□ 0.09
CUX2-201ENST00000261726 POLR2FP61218 127 aaKnown RBP15.63■□□□□ 0.09
CUX2-201ENST00000261726 PPM1KQ8N3J5 372 aa15.63■□□□□ 0.09
CUX2-201ENST00000261726 TRIM58Q8NG06 486 aa15.63■□□□□ 0.09
CUX2-201ENST00000261726 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.63■□□□□ 0.09
CUX2-201ENST00000261726 PPIP5K2O43314 1243 aa15.63■□□□□ 0.09
CUX2-201ENST00000261726 RCN2Q14257 317 aa15.63■□□□□ 0.09
CUX2-201ENST00000261726 RINT1Q6NUQ1 792 aa15.63■□□□□ 0.09
CUX2-201ENST00000261726 POC1B-GALNT4F8VUJ3 575 aa15.63■□□□□ 0.09
CUX2-201ENST00000261726 TTC4O95801 387 aa15.63■□□□□ 0.09
CUX2-201ENST00000261726 A1BGP04217 495 aa15.63■□□□□ 0.09
CUX2-201ENST00000261726 YWHAGP61981 247 aaKnown RBP eCLIP15.63■□□□□ 0.09
CUX2-201ENST00000261726 FAN1Q9Y2M0 1017 aa15.63■□□□□ 0.09
CUX2-201ENST00000261726 PRPSAP1Q14558 356 aa15.63■□□□□ 0.09
CUX2-201ENST00000261726 CCDC127Q96BQ5 260 aa15.63■□□□□ 0.09
CUX2-201ENST00000261726 DISC1Q9NRI5 854 aa15.63■□□□□ 0.09
CUX2-201ENST00000261726 ZNF148Q9UQR1 794 aa15.63■□□□□ 0.09
CUX2-201ENST00000261726 KIF22Q14807 665 aa15.63■□□□□ 0.09
CUX2-201ENST00000261726 LCA5Q86VQ0 697 aa15.63■□□□□ 0.09
CUX2-201ENST00000261726 SUPT20HQ8NEM7 779 aa15.63■□□□□ 0.09
CUX2-201ENST00000261726 FIS1Q9Y3D6 152 aa15.63■□□□□ 0.09
CUX2-201ENST00000261726 HYOU1Q9Y4L1 999 aa15.63■□□□□ 0.09
CUX2-201ENST00000261726 A6NJR5 290 aa15.62■□□□□ 0.09
CUX2-201ENST00000261726 TCP10L2B9ZVM9 353 aa15.62■□□□□ 0.09
CUX2-201ENST00000261726 CLTAP09496 248 aa15.62■□□□□ 0.09
CUX2-201ENST00000261726 PPARAQ07869 468 aa15.62■□□□□ 0.09
CUX2-201ENST00000261726 NCAPG2Q86XI2 1143 aa15.62■□□□□ 0.09
CUX2-201ENST00000261726 RNF217Q8TC41 542 aa15.62■□□□□ 0.09
CUX2-201ENST00000261726 SUCLG2Q96I99 432 aa15.62■□□□□ 0.09
CUX2-201ENST00000261726 SLC5A4Q9NY91 659 aa15.62■□□□□ 0.09
CUX2-201ENST00000261726 GOLGA8KD6RF30 607 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms