RNA–Protein interactions for RNA: ENST00000251241.8

DHX40-201, Transcript of DEAH-box helicase 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHX40, Length 3,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40-201ENST00000251241 AIFM3Q96NN9 605 aa10.77□□□□□ -0.69
DHX40-201ENST00000251241 EPAS1Q99814 870 aa10.77□□□□□ -0.69
DHX40-201ENST00000251241 SLC26A6Q9BXS9 759 aa10.77□□□□□ -0.69
DHX40-201ENST00000251241 FAM170AA1A519 330 aa10.77□□□□□ -0.69
DHX40-201ENST00000251241 ZRANB2O95218 330 aaKnown RBP eCLIP10.77□□□□□ -0.69
DHX40-201ENST00000251241 GNAT1P11488 350 aa10.77□□□□□ -0.69
DHX40-201ENST00000251241 CAVIN4Q5BKX8 364 aa10.77□□□□□ -0.69
DHX40-201ENST00000251241 NAA16Q6N069 864 aaPredicted RBP10.77□□□□□ -0.69
DHX40-201ENST00000251241 C3orf67Q6ZVT6 689 aa10.77□□□□□ -0.69
DHX40-201ENST00000251241 SNRNP27Q8WVK2 155 aaKnown RBP10.77□□□□□ -0.69
DHX40-201ENST00000251241 NAT10Q9H0A0 1025 aaKnown RBP10.77□□□□□ -0.69
DHX40-201ENST00000251241 HDAC6Q9UBN7 1215 aa10.77□□□□□ -0.69
DHX40-201ENST00000251241 MTMR7Q9Y216 660 aa10.77□□□□□ -0.69
DHX40-201ENST00000251241 USH1CQ9Y6N9 552 aa10.77□□□□□ -0.69
DHX40-201ENST00000251241 UBR3Q6ZT12 1888 aa10.77□□□□□ -0.69
DHX40-201ENST00000251241 BIN1O00499 593 aa10.76□□□□□ -0.69
DHX40-201ENST00000251241 NDUFAB1O14561 156 aa10.76□□□□□ -0.69
DHX40-201ENST00000251241 IARSP41252 1262 aaKnown RBP10.76□□□□□ -0.69
DHX40-201ENST00000251241 KARSQ15046 597 aaKnown RBP10.76□□□□□ -0.69
DHX40-201ENST00000251241 SLC30A9Q6PML9 568 aa10.76□□□□□ -0.69
DHX40-201ENST00000251241 PALB2Q86YC2 1186 aa10.76□□□□□ -0.69
DHX40-201ENST00000251241 PDILTQ8N807 584 aa10.76□□□□□ -0.69
DHX40-201ENST00000251241 AFAP1L1Q8TED9 768 aa10.76□□□□□ -0.69
DHX40-201ENST00000251241 WHAMMQ8TF30 809 aa10.76□□□□□ -0.69
DHX40-201ENST00000251241 TRAIPQ9BWF2 469 aa10.76□□□□□ -0.69
DHX40-201ENST00000251241 ANKIB1Q9P2G1 1089 aa10.76□□□□□ -0.69
DHX40-201ENST00000251241 ABCC12Q96J65 1359 aa10.76□□□□□ -0.69
DHX40-201ENST00000251241 GRIK3Q13003 919 aa10.76□□□□□ -0.69
DHX40-201ENST00000251241 UBE3CQ15386 1083 aa10.76□□□□□ -0.69
DHX40-201ENST00000251241 ACCSLQ4AC99 568 aa10.76□□□□□ -0.69
DHX40-201ENST00000251241 CEP57L1Q8IYX8 460 aa10.76□□□□□ -0.69
DHX40-201ENST00000251241 IFNL3Q8IZI9 196 aa10.76□□□□□ -0.69
DHX40-201ENST00000251241 SMARCC2Q8TAQ2 1214 aa10.76□□□□□ -0.69
DHX40-201ENST00000251241 SDR42E1Q8WUS8 393 aa10.76□□□□□ -0.69
DHX40-201ENST00000251241 TSPAN18Q96SJ8 248 aa10.76□□□□□ -0.69
DHX40-201ENST00000251241 UBAC1Q9BSL1 405 aa10.76□□□□□ -0.69
DHX40-201ENST00000251241 DDX20Q9UHI6 824 aaKnown RBP10.76□□□□□ -0.69
DHX40-201ENST00000251241 ELP1O95163 1332 aa10.76□□□□□ -0.69
DHX40-201ENST00000251241 POLRMTO00411 1230 aaKnown RBP10.76□□□□□ -0.69
DHX40-201ENST00000251241 LSM1O15116 133 aaKnown RBP10.76□□□□□ -0.69
DHX40-201ENST00000251241 ZMYND10O75800 440 aa10.76□□□□□ -0.69
DHX40-201ENST00000251241 TM4SF1P30408 202 aa10.76□□□□□ -0.69
DHX40-201ENST00000251241 CLCN2P51788 898 aa10.76□□□□□ -0.69
DHX40-201ENST00000251241 CMTR1Q8N1G2 835 aaKnown RBP10.76□□□□□ -0.69
DHX40-201ENST00000251241 NACA2Q9H009 215 aa10.76□□□□□ -0.69
DHX40-201ENST00000251241 CLSTN2Q9H4D0 955 aa10.76□□□□□ -0.69
DHX40-201ENST00000251241 KLC4Q9NSK0 619 aa10.76□□□□□ -0.69
DHX40-201ENST00000251241 RABL2AQ9UBK7 228 aaPredicted RBP10.76□□□□□ -0.69
DHX40-201ENST00000251241 CICQ96RK0 1608 aaPredicted RBP10.75□□□□□ -0.69
DHX40-201ENST00000251241 RANBP6O60518 1105 aaKnown RBP10.75□□□□□ -0.69
DHX40-201ENST00000251241 CSPG5O95196 566 aa10.75□□□□□ -0.69
DHX40-201ENST00000251241 ATP1A2P50993 1020 aa10.75□□□□□ -0.69
DHX40-201ENST00000251241 CCDC50Q8IVM0 306 aa10.75□□□□□ -0.69
DHX40-201ENST00000251241 MB21D2Q8IYB1 491 aaPredicted RBP10.75□□□□□ -0.69
DHX40-201ENST00000251241 RPGRQ92834 1020 aaKnown RBP10.75□□□□□ -0.69
DHX40-201ENST00000251241 TMOD4Q9NZQ9 345 aa10.75□□□□□ -0.69
DHX40-201ENST00000251241 TMA7Q9Y2S6 64 aaKnown RBP10.75□□□□□ -0.69
DHX40-201ENST00000251241 RREB1Q92766 1687 aa10.75□□□□□ -0.69
DHX40-201ENST00000251241 UNCXA6NJT0 531 aa10.75□□□□□ -0.69
DHX40-201ENST00000251241 PRDM1O75626 825 aa10.75□□□□□ -0.69
DHX40-201ENST00000251241 TFRCP02786 760 aaKnown RBP10.75□□□□□ -0.69
DHX40-201ENST00000251241 RHBDL3P58872 404 aa10.75□□□□□ -0.69
DHX40-201ENST00000251241 ZNF280DQ6N043 979 aa10.75□□□□□ -0.69
DHX40-201ENST00000251241 CYB5R4Q7L1T6 521 aa10.75□□□□□ -0.69
DHX40-201ENST00000251241 NANOGNBQ7Z5D8 188 aa10.75□□□□□ -0.69
DHX40-201ENST00000251241 ABTB1Q969K4 478 aaPredicted RBP10.75□□□□□ -0.69
DHX40-201ENST00000251241 PCDHGA4Q9Y5G9 962 aa10.75□□□□□ -0.69
DHX40-201ENST00000251241 ANTXR2P58335 489 aa10.74□□□□□ -0.69
DHX40-201ENST00000251241 SAFBQ15424 915 aaKnown RBP eCLIP10.74□□□□□ -0.69
DHX40-201ENST00000251241 LCORLQ8N3X6 602 aa10.74□□□□□ -0.69
DHX40-201ENST00000251241 TAF4BQ92750 862 aa10.74□□□□□ -0.69
DHX40-201ENST00000251241 STRBPQ96SI9 672 aaKnown RBP10.74□□□□□ -0.69
DHX40-201ENST00000251241 FUT8Q9BYC5 575 aa10.74□□□□□ -0.69
DHX40-201ENST00000251241 ITM2BQ9Y287 266 aa10.74□□□□□ -0.69
DHX40-201ENST00000251241 CTDP1Q9Y5B0 961 aaPredicted RBP10.74□□□□□ -0.69
DHX40-201ENST00000251241 NDUFB5O43674 189 aa10.74□□□□□ -0.69
DHX40-201ENST00000251241 RNF40O75150 1001 aa10.74□□□□□ -0.69
DHX40-201ENST00000251241 TUFMP49411 452 aaKnown RBP10.74□□□□□ -0.69
DHX40-201ENST00000251241 CAPN12Q6ZSI9 719 aa10.74□□□□□ -0.69
DHX40-201ENST00000251241 PNMA8AQ86V59 439 aaPredicted RBP10.74□□□□□ -0.69
DHX40-201ENST00000251241 ATRIPQ8WXE1 791 aa10.74□□□□□ -0.69
DHX40-201ENST00000251241 TSC22D3Q99576 134 aa10.74□□□□□ -0.69
DHX40-201ENST00000251241 SENP2Q9HC62 589 aa10.74□□□□□ -0.69
DHX40-201ENST00000251241 ABCF3Q9NUQ8 709 aa10.74□□□□□ -0.69
DHX40-201ENST00000251241 WTIPA6NIX2 430 aaPredicted RBP10.74□□□□□ -0.69
DHX40-201ENST00000251241 IFT88Q13099 833 aa10.74□□□□□ -0.69
DHX40-201ENST00000251241 WTAPQ15007 396 aa10.74□□□□□ -0.69
DHX40-201ENST00000251241 TRIM22Q8IYM9 498 aa10.74□□□□□ -0.69
DHX40-201ENST00000251241 DRAXINQ8NBI3 349 aaPredicted RBP10.74□□□□□ -0.69
DHX40-201ENST00000251241 MRPS27Q92552 414 aaKnown RBP10.74□□□□□ -0.69
DHX40-201ENST00000251241 ARPC5LQ9BPX5 153 aa10.74□□□□□ -0.69
DHX40-201ENST00000251241 IQCGQ9H095 443 aaKnown RBP10.74□□□□□ -0.69
DHX40-201ENST00000251241 CLIC4Q9Y696 253 aa10.74□□□□□ -0.69
DHX40-201ENST00000251241 RIC1Q4ADV7 1423 aa10.74□□□□□ -0.69
DHX40-201ENST00000251241 SPTLC2O15270 562 aa10.73□□□□□ -0.69
DHX40-201ENST00000251241 NCAPG2Q86XI2 1143 aa10.73□□□□□ -0.69
DHX40-201ENST00000251241 PARP9Q8IXQ6 854 aa10.73□□□□□ -0.69
DHX40-201ENST00000251241 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.73□□□□□ -0.69
DHX40-201ENST00000251241 TBC1D7Q9P0N9 293 aa10.73□□□□□ -0.69
DHX40-201ENST00000251241 ZNF219Q9P2Y4 722 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms