RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 ARL6IP4Q66PJ3 421 aaKnown RBP16.21■□□□□ 0.19
SDF2-201ENST00000247020 MCTP2Q6DN12 878 aa16.21■□□□□ 0.19
SDF2-201ENST00000247020 FAM160B2Q86V87 743 aa16.21■□□□□ 0.19
SDF2-201ENST00000247020 REXO1Q8N1G1 1221 aaKnown RBP16.21■□□□□ 0.19
SDF2-201ENST00000247020 CHURC1Q8WUH1 139 aa16.21■□□□□ 0.19
SDF2-201ENST00000247020 TSPY26PQ9H489 355 aa16.21■□□□□ 0.19
SDF2-201ENST00000247020 GRPEL1Q9HAV7 217 aa16.21■□□□□ 0.19
SDF2-201ENST00000247020 HPSEQ9Y251 543 aa16.21■□□□□ 0.19
SDF2-201ENST00000247020 PHIPQ8WWQ0 1821 aa16.21■□□□□ 0.19
SDF2-201ENST00000247020 TMEM232C9JQI7 657 aa16.21■□□□□ 0.18
SDF2-201ENST00000247020 LAD1O00515 517 aa16.21■□□□□ 0.18
SDF2-201ENST00000247020 GRIN3BO60391 1043 aa16.21■□□□□ 0.18
SDF2-201ENST00000247020 SLC16A2P36021 539 aa16.21■□□□□ 0.18
SDF2-201ENST00000247020 HIRAP54198 1017 aaPredicted RBP16.21■□□□□ 0.18
SDF2-201ENST00000247020 NONOQ15233 471 aaKnown RBP eCLIP16.21■□□□□ 0.18
SDF2-201ENST00000247020 CDC37Q16543 378 aaPredicted RBP16.21■□□□□ 0.18
SDF2-201ENST00000247020 QRICH1Q2TAL8 776 aa16.21■□□□□ 0.18
SDF2-201ENST00000247020 SUPT20HL1Q3ZLR7 823 aa16.21■□□□□ 0.18
SDF2-201ENST00000247020 TPRNQ4KMQ1 711 aa16.21■□□□□ 0.18
SDF2-201ENST00000247020 NBPF12Q5TAG4 269 aaPredicted RBP16.21■□□□□ 0.18
SDF2-201ENST00000247020 ACER1Q8TDN7 264 aa16.21■□□□□ 0.18
SDF2-201ENST00000247020 LPAR1Q92633 364 aa16.21■□□□□ 0.18
SDF2-201ENST00000247020 CUL5Q93034 780 aa16.21■□□□□ 0.18
SDF2-201ENST00000247020 PAPPA2Q9BXP8 1791 aa16.2■□□□□ 0.18
SDF2-201ENST00000247020 MRPL12P52815 198 aaKnown RBP16.2■□□□□ 0.18
SDF2-201ENST00000247020 ELOA2Q8IYF1 753 aaPredicted RBP16.2■□□□□ 0.18
SDF2-201ENST00000247020 FUCA2Q9BTY2 467 aa16.2■□□□□ 0.18
SDF2-201ENST00000247020 AMNQ9BXJ7 453 aa16.2■□□□□ 0.18
SDF2-201ENST00000247020 KIAA1683Q9H0B3 1180 aa16.2■□□□□ 0.18
SDF2-201ENST00000247020 AS3MTQ9HBK9 375 aa16.2■□□□□ 0.18
SDF2-201ENST00000247020 A0A1B0GVL5 298 aa16.19■□□□□ 0.18
SDF2-201ENST00000247020 WDR46O15213 610 aaKnown RBP16.19■□□□□ 0.18
SDF2-201ENST00000247020 PPP1R11O60927 126 aaPredicted RBP16.19■□□□□ 0.18
SDF2-201ENST00000247020 CCDC192P0DO97 292 aa16.19■□□□□ 0.18
SDF2-201ENST00000247020 PFKFB1P16118 471 aa16.19■□□□□ 0.18
SDF2-201ENST00000247020 CLK2P49760 499 aaKnown RBP16.19■□□□□ 0.18
SDF2-201ENST00000247020 NDUFA8P51970 172 aa16.19■□□□□ 0.18
SDF2-201ENST00000247020 USP14P54578 494 aa16.19■□□□□ 0.18
SDF2-201ENST00000247020 SHC4Q6S5L8 630 aa16.19■□□□□ 0.18
SDF2-201ENST00000247020 SCYL3Q8IZE3 742 aa16.19■□□□□ 0.18
SDF2-201ENST00000247020 COA7Q96BR5 231 aa16.19■□□□□ 0.18
SDF2-201ENST00000247020 WDR18Q9BV38 432 aa16.19■□□□□ 0.18
SDF2-201ENST00000247020 FAM13BQ9NYF5 915 aa16.19■□□□□ 0.18
SDF2-201ENST00000247020 FEM1BQ9UK73 627 aa16.19■□□□□ 0.18
SDF2-201ENST00000247020 PARP14Q460N5 1801 aa16.19■□□□□ 0.18
SDF2-201ENST00000247020 IKQ13123 557 aaPredicted RBP16.18■□□□□ 0.18
SDF2-201ENST00000247020 NOM1Q5C9Z4 860 aaKnown RBP16.18■□□□□ 0.18
SDF2-201ENST00000247020 NOL9Q5SY16 702 aaKnown RBP16.18■□□□□ 0.18
SDF2-201ENST00000247020 USP50Q70EL3 339 aaPredicted RBP16.18■□□□□ 0.18
SDF2-201ENST00000247020 SSC5DA1L4H1 1573 aa16.18■□□□□ 0.18
SDF2-201ENST00000247020 WDR90Q96KV7 1748 aa16.18■□□□□ 0.18
SDF2-201ENST00000247020 ADAMTS3O15072 1205 aa16.17■□□□□ 0.18
SDF2-201ENST00000247020 ZNF202O95125 648 aa16.17■□□□□ 0.18
SDF2-201ENST00000247020 ATP2B1P20020 1258 aa16.17■□□□□ 0.18
SDF2-201ENST00000247020 PRPHP41219 470 aa16.17■□□□□ 0.18
SDF2-201ENST00000247020 SYKP43405 635 aa16.17■□□□□ 0.18
SDF2-201ENST00000247020 PTGDRQ13258 359 aa16.17■□□□□ 0.18
SDF2-201ENST00000247020 ZNF174Q15697 407 aa16.17■□□□□ 0.18
SDF2-201ENST00000247020 FAM83BQ5T0W9 1011 aa16.17■□□□□ 0.18
SDF2-201ENST00000247020 NEK8Q86SG6 692 aa16.17■□□□□ 0.18
SDF2-201ENST00000247020 FBXO11Q86XK2 927 aa16.17■□□□□ 0.18
SDF2-201ENST00000247020 RASGRP4Q8TDF6 673 aa16.17■□□□□ 0.18
SDF2-201ENST00000247020 ZC3H15Q8WU90 426 aaKnown RBP16.17■□□□□ 0.18
SDF2-201ENST00000247020 DCPSQ96C86 337 aaKnown RBP16.17■□□□□ 0.18
SDF2-201ENST00000247020 NUP88Q99567 741 aaPredicted RBP16.17■□□□□ 0.18
SDF2-201ENST00000247020 FEZ1Q99689 392 aa16.17■□□□□ 0.18
SDF2-201ENST00000247020 NAP1L4Q99733 375 aaKnown RBP16.17■□□□□ 0.18
SDF2-201ENST00000247020 PRR12Q9ULL5 1215 aa16.17■□□□□ 0.18
SDF2-201ENST00000247020 PCDHA1Q9Y5I3 950 aa16.17■□□□□ 0.18
SDF2-201ENST00000247020 CAVIN2O95810 425 aa16.17■□□□□ 0.18
SDF2-201ENST00000247020 AP3B2Q13367 1082 aa16.17■□□□□ 0.18
SDF2-201ENST00000247020 INF2Q27J81 1249 aa16.17■□□□□ 0.18
SDF2-201ENST00000247020 KIAA1755Q5JYT7 1200 aa16.17■□□□□ 0.18
SDF2-201ENST00000247020 KLRG1Q96E93 195 aa16.17■□□□□ 0.18
SDF2-201ENST00000247020 CLIC6Q96NY7 704 aa16.17■□□□□ 0.18
SDF2-201ENST00000247020 PYM1Q9BRP8 204 aaKnown RBP16.17■□□□□ 0.18
SDF2-201ENST00000247020 RANBP17Q9H2T7 1088 aaKnown RBP16.17■□□□□ 0.18
SDF2-201ENST00000247020 PSTPIP2Q9H939 334 aa16.17■□□□□ 0.18
SDF2-201ENST00000247020 SCAF8Q9UPN6 1271 aaKnown RBP16.17■□□□□ 0.18
SDF2-201ENST00000247020 MYH7BA7E2Y1 1941 aa16.17■□□□□ 0.18
SDF2-201ENST00000247020 OTOFQ9HC10 1997 aa16.16■□□□□ 0.18
SDF2-201ENST00000247020 WNT7AO00755 349 aa16.16■□□□□ 0.18
SDF2-201ENST00000247020 GPR162Q16538 588 aa16.16■□□□□ 0.18
SDF2-201ENST00000247020 CAMK4Q16566 473 aa16.16■□□□□ 0.18
SDF2-201ENST00000247020 SPICE1Q8N0Z3 855 aa16.16■□□□□ 0.18
SDF2-201ENST00000247020 C4orf32Q8N8J7 132 aa16.16■□□□□ 0.18
SDF2-201ENST00000247020 WRNIP1Q96S55 665 aa16.16■□□□□ 0.18
SDF2-201ENST00000247020 PICK1Q9NRD5 415 aa16.16■□□□□ 0.18
SDF2-201ENST00000247020 KCNH3Q9ULD8 1083 aa16.16■□□□□ 0.18
SDF2-201ENST00000247020 RBBP6Q7Z6E9 1792 aaKnown RBP16.15■□□□□ 0.18
SDF2-201ENST00000247020 GLTPD2A6NH11 291 aa16.15■□□□□ 0.18
SDF2-201ENST00000247020 FDX1P10109 184 aa16.15■□□□□ 0.18
SDF2-201ENST00000247020 INPP5BP32019 993 aa16.15■□□□□ 0.18
SDF2-201ENST00000247020 MCM7P33993 719 aa16.15■□□□□ 0.18
SDF2-201ENST00000247020 LONP1P36776 959 aaKnown RBP16.15■□□□□ 0.18
SDF2-201ENST00000247020 SULF1Q8IWU6 871 aa16.15■□□□□ 0.18
SDF2-201ENST00000247020 TBCKQ8TEA7 893 aa16.15■□□□□ 0.18
SDF2-201ENST00000247020 C12orf42Q96LP6 360 aa16.15■□□□□ 0.18
SDF2-201ENST00000247020 CSRNP2Q9H175 543 aa16.15■□□□□ 0.18
SDF2-201ENST00000247020 BIN2Q9UBW5 565 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms