RNA–Protein interactions for RNA: ENST00000244709.8

TREM1-201, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TREM1, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-201ENST00000244709 IRX3P78415 501 aaPredicted RBP13.25□□□□□ -0.29
TREM1-201ENST00000244709 GRM1Q13255 1194 aa13.25□□□□□ -0.29
TREM1-201ENST00000244709 PABPC4Q13310 644 aaKnown RBP eCLIP13.25□□□□□ -0.29
TREM1-201ENST00000244709 TYW1BQ6NUM6 668 aa13.25□□□□□ -0.29
TREM1-201ENST00000244709 COA7Q96BR5 231 aa13.25□□□□□ -0.29
TREM1-201ENST00000244709 P2RX7Q99572 595 aaKnown RBP13.25□□□□□ -0.29
TREM1-201ENST00000244709 ASCC2Q9H1I8 757 aaPredicted RBP13.25□□□□□ -0.29
TREM1-201ENST00000244709 SLC38A10Q9HBR0 1119 aa13.25□□□□□ -0.29
TREM1-201ENST00000244709 BARHL2Q9NY43 387 aa13.25□□□□□ -0.29
TREM1-201ENST00000244709 KCNJ14Q9UNX9 436 aa13.25□□□□□ -0.29
TREM1-201ENST00000244709 MYPNQ86TC9 1320 aa13.25□□□□□ -0.29
TREM1-201ENST00000244709 TESPA1A2RU30 521 aaPredicted RBP13.24□□□□□ -0.29
TREM1-201ENST00000244709 VPS37CA5D8V6 355 aaPredicted RBP13.24□□□□□ -0.29
TREM1-201ENST00000244709 MANSC4A6NHS7 340 aaPredicted RBP13.24□□□□□ -0.29
TREM1-201ENST00000244709 RASSF10A6NK89 507 aa13.24□□□□□ -0.29
TREM1-201ENST00000244709 H3BQV1 296 aa13.24□□□□□ -0.29
TREM1-201ENST00000244709 hCG_1984214I3L0E3 225 aa13.24□□□□□ -0.29
TREM1-201ENST00000244709 VWA5AO00534 786 aa13.24□□□□□ -0.29
TREM1-201ENST00000244709 OSBPP22059 807 aa13.24□□□□□ -0.29
TREM1-201ENST00000244709 IFFO2Q5TF58 517 aa13.24□□□□□ -0.29
TREM1-201ENST00000244709 KRT40Q6A162 431 aa13.24□□□□□ -0.29
TREM1-201ENST00000244709 ANKRD23Q86SG2 305 aa13.24□□□□□ -0.29
TREM1-201ENST00000244709 FBXO11Q86XK2 927 aa13.24□□□□□ -0.29
TREM1-201ENST00000244709 FAM43AQ8N2R8 423 aa13.24□□□□□ -0.29
TREM1-201ENST00000244709 ZNF713Q8N859 430 aaPredicted RBP13.24□□□□□ -0.29
TREM1-201ENST00000244709 REPS2Q8NFH8 660 aa13.24□□□□□ -0.29
TREM1-201ENST00000244709 FBXO18Q8NFZ0 1043 aa13.24□□□□□ -0.29
TREM1-201ENST00000244709 PTPN18Q99952 460 aa13.24□□□□□ -0.29
TREM1-201ENST00000244709 HOXC10Q9NYD6 342 aa13.24□□□□□ -0.29
TREM1-201ENST00000244709 CIZ1Q9ULV3 898 aaPredicted RBP13.24□□□□□ -0.29
TREM1-201ENST00000244709 ADAMTS5Q9UNA0 930 aa13.24□□□□□ -0.29
TREM1-201ENST00000244709 MTMR6Q9Y217 621 aa13.24□□□□□ -0.29
TREM1-201ENST00000244709 ZNF536O15090 1300 aa13.24□□□□□ -0.29
TREM1-201ENST00000244709 RBBP6Q7Z6E9 1792 aaKnown RBP13.24□□□□□ -0.29
TREM1-201ENST00000244709 PDHXO00330 501 aa13.24□□□□□ -0.29
TREM1-201ENST00000244709 ZBED4O75132 1171 aa13.24□□□□□ -0.29
TREM1-201ENST00000244709 XBP1P17861 261 aa13.24□□□□□ -0.29
TREM1-201ENST00000244709 NAPAP54920 295 aa13.24□□□□□ -0.29
TREM1-201ENST00000244709 TRIM29Q14134 588 aa13.24□□□□□ -0.29
TREM1-201ENST00000244709 DEFB115Q30KQ5 88 aa13.24□□□□□ -0.29
TREM1-201ENST00000244709 USH1GQ495M9 461 aa13.24□□□□□ -0.29
TREM1-201ENST00000244709 FOXD4L5Q5VV16 416 aaPredicted RBP13.24□□□□□ -0.29
TREM1-201ENST00000244709 FOXD4L4Q8WXT5 416 aaPredicted RBP13.24□□□□□ -0.29
TREM1-201ENST00000244709 ZIC5Q96T25 663 aa13.24□□□□□ -0.29
TREM1-201ENST00000244709 AMNQ9BXJ7 453 aa13.24□□□□□ -0.29
TREM1-201ENST00000244709 SH3GLB2Q9NR46 395 aa13.24□□□□□ -0.29
TREM1-201ENST00000244709 SLC45A1Q9Y2W3 748 aa13.24□□□□□ -0.29
TREM1-201ENST00000244709 CTDP1Q9Y5B0 961 aaPredicted RBP13.24□□□□□ -0.29
TREM1-201ENST00000244709 FDX1P10109 184 aa13.23□□□□□ -0.29
TREM1-201ENST00000244709 CYP2C8P10632 490 aa13.23□□□□□ -0.29
TREM1-201ENST00000244709 HERVK_113P62684 666 aa13.23□□□□□ -0.29
TREM1-201ENST00000244709 POTEEQ6S8J3 1075 aa13.23□□□□□ -0.29
TREM1-201ENST00000244709 CPXCR1Q8N123 301 aa13.23□□□□□ -0.29
TREM1-201ENST00000244709 CCDC148Q8NFR7 591 aa13.23□□□□□ -0.29
TREM1-201ENST00000244709 AGBL1Q96MI9 1066 aa13.23□□□□□ -0.29
TREM1-201ENST00000244709 PHF20Q9BVI0 1012 aa13.23□□□□□ -0.29
TREM1-201ENST00000244709 RAVER2Q9HCJ3 691 aaKnown RBP13.23□□□□□ -0.29
TREM1-201ENST00000244709 CHMP5Q9NZZ3 219 aa13.23□□□□□ -0.29
TREM1-201ENST00000244709 PNMA3Q9UL41 463 aa13.23□□□□□ -0.29
TREM1-201ENST00000244709 ZDHHC9Q9Y397 364 aa13.23□□□□□ -0.29
TREM1-201ENST00000244709 PCDHA1Q9Y5I3 950 aa13.23□□□□□ -0.29
TREM1-201ENST00000244709 MYH15Q9Y2K3 1946 aa13.23□□□□□ -0.29
TREM1-201ENST00000244709 IGF2BP3O00425 579 aaKnown RBP eCLIP13.22□□□□□ -0.29
TREM1-201ENST00000244709 PEX10O60683 326 aa13.22□□□□□ -0.29
TREM1-201ENST00000244709 BRD1O95696 1058 aa13.22□□□□□ -0.29
TREM1-201ENST00000244709 MMP1P03956 469 aa13.22□□□□□ -0.29
TREM1-201ENST00000244709 ICAM1P05362 532 aa13.22□□□□□ -0.29
TREM1-201ENST00000244709 NLRP5P59047 1200 aa13.22□□□□□ -0.29
TREM1-201ENST00000244709 HTRA3P83110 453 aa13.22□□□□□ -0.29
TREM1-201ENST00000244709 TMEM132BQ14DG7 1078 aa13.22□□□□□ -0.29
TREM1-201ENST00000244709 PPP1R18Q6NYC8 613 aa13.22□□□□□ -0.29
TREM1-201ENST00000244709 LBX2Q6XYB7 198 aa13.22□□□□□ -0.29
TREM1-201ENST00000244709 CCPG1Q9ULG6 757 aa13.22□□□□□ -0.29
TREM1-201ENST00000244709 AOC2O75106 756 aa13.21□□□□□ -0.29
TREM1-201ENST00000244709 ZSCAN22P10073 491 aaPredicted RBP13.21□□□□□ -0.29
TREM1-201ENST00000244709 NUCB2P80303 420 aa13.21□□□□□ -0.29
TREM1-201ENST00000244709 KIF23Q02241 960 aaPredicted RBP13.21□□□□□ -0.29
TREM1-201ENST00000244709 NPY5RQ15761 445 aa13.21□□□□□ -0.29
TREM1-201ENST00000244709 RGS22Q8NE09 1264 aa13.21□□□□□ -0.29
TREM1-201ENST00000244709 CCDC12Q8WUD4 166 aaPredicted RBP13.21□□□□□ -0.29
TREM1-201ENST00000244709 CAPNS2Q96L46 248 aa13.21□□□□□ -0.29
TREM1-201ENST00000244709 PAGR1Q9BTK6 254 aa13.21□□□□□ -0.29
TREM1-201ENST00000244709 ZMYND12Q9H0C1 365 aa13.21□□□□□ -0.29
TREM1-201ENST00000244709 BTBD7Q9P203 1132 aa13.21□□□□□ -0.29
TREM1-201ENST00000244709 ZNF214Q9UL59 606 aaPredicted RBP13.21□□□□□ -0.29
TREM1-201ENST00000244709 WDR33Q9C0J8 1336 aaKnown RBP13.21□□□□□ -0.29
TREM1-201ENST00000244709 SMCO2A6NFE2 343 aa13.21□□□□□ -0.3
TREM1-201ENST00000244709 KIF28PB7ZC32 967 aa13.21□□□□□ -0.3
TREM1-201ENST00000244709 ADAMTS3O15072 1205 aa13.21□□□□□ -0.3
TREM1-201ENST00000244709 CNMDO75829 334 aa13.21□□□□□ -0.3
TREM1-201ENST00000244709 PDIA4P13667 645 aaKnown RBP13.21□□□□□ -0.3
TREM1-201ENST00000244709 OAZ1P54368 228 aa13.21□□□□□ -0.3
TREM1-201ENST00000244709 SREBF2Q12772 1141 aa13.21□□□□□ -0.3
TREM1-201ENST00000244709 MCTP1Q6DN14 999 aa13.21□□□□□ -0.3
TREM1-201ENST00000244709 SNRNP48Q6IEG0 339 aaKnown RBP13.21□□□□□ -0.3
TREM1-201ENST00000244709 FERMT3Q86UX7 667 aa13.21□□□□□ -0.3
TREM1-201ENST00000244709 IFNL1Q8IU54 200 aa13.21□□□□□ -0.3
TREM1-201ENST00000244709 DIS3L2Q8IYB7 885 aaKnown RBP13.21□□□□□ -0.3
TREM1-201ENST00000244709 MB21D1Q8N884 522 aa13.21□□□□□ -0.3
TREM1-201ENST00000244709 OXER1Q8TDS5 423 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms