RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 TERF2Q15554 542 aa10.3□□□□□ -0.76
SYDE2-201ENST00000234668 SPTY2D1Q68D10 685 aaPredicted RBP10.3□□□□□ -0.76
SYDE2-201ENST00000234668 DYMQ7RTS9 669 aa10.3□□□□□ -0.76
SYDE2-201ENST00000234668 DGKHQ86XP1 1220 aa10.3□□□□□ -0.76
SYDE2-201ENST00000234668 PANX2Q96RD6 677 aa10.3□□□□□ -0.76
SYDE2-201ENST00000234668 NOL10Q9BSC4 688 aaKnown RBP10.3□□□□□ -0.76
SYDE2-201ENST00000234668 GTPBP4Q9BZE4 634 aaKnown RBP10.3□□□□□ -0.76
SYDE2-201ENST00000234668 LRRC4BQ9NT99 713 aa10.3□□□□□ -0.76
SYDE2-201ENST00000234668 ABHD10Q9NUJ1 306 aa10.3□□□□□ -0.76
SYDE2-201ENST00000234668 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.29□□□□□ -0.76
SYDE2-201ENST00000234668 GRM4Q14833 912 aa10.29□□□□□ -0.76
SYDE2-201ENST00000234668 MFSD14BQ5SR56 506 aa10.29□□□□□ -0.76
SYDE2-201ENST00000234668 FCHSD1Q86WN1 690 aa10.29□□□□□ -0.76
SYDE2-201ENST00000234668 WDR66Q8TBY9 1149 aa10.29□□□□□ -0.76
SYDE2-201ENST00000234668 CD209Q9NNX6 404 aa10.29□□□□□ -0.76
SYDE2-201ENST00000234668 AGPAT5Q9NUQ2 364 aa10.29□□□□□ -0.76
SYDE2-201ENST00000234668 RWDD2AQ9UIY3 292 aa10.29□□□□□ -0.76
SYDE2-201ENST00000234668 SRGAP2O75044 1071 aa10.29□□□□□ -0.76
SYDE2-201ENST00000234668 PCP11498 1178 aaKnown RBP10.29□□□□□ -0.76
SYDE2-201ENST00000234668 GRAPQ13588 217 aa10.29□□□□□ -0.76
SYDE2-201ENST00000234668 NCAPH2Q6IBW4 605 aa10.29□□□□□ -0.76
SYDE2-201ENST00000234668 GRAPLQ8TC17 118 aaPredicted RBP10.29□□□□□ -0.76
SYDE2-201ENST00000234668 RPGRQ92834 1020 aaKnown RBP10.29□□□□□ -0.76
SYDE2-201ENST00000234668 CTAGE1Q96RT6 745 aa10.29□□□□□ -0.76
SYDE2-201ENST00000234668 SLC39A2Q9NP94 309 aa10.29□□□□□ -0.76
SYDE2-201ENST00000234668 BARHL2Q9NY43 387 aa10.29□□□□□ -0.76
SYDE2-201ENST00000234668 KLRC4O43908 158 aa10.28□□□□□ -0.76
SYDE2-201ENST00000234668 TPM1P09493 284 aa10.28□□□□□ -0.76
SYDE2-201ENST00000234668 LONP1P36776 959 aaKnown RBP10.28□□□□□ -0.76
SYDE2-201ENST00000234668 GTF2IP78347 998 aa10.28□□□□□ -0.76
SYDE2-201ENST00000234668 ASIC1P78348 528 aa10.28□□□□□ -0.76
SYDE2-201ENST00000234668 PDE4DQ08499 809 aa10.28□□□□□ -0.76
SYDE2-201ENST00000234668 CABP7Q86V35 215 aa10.28□□□□□ -0.76
SYDE2-201ENST00000234668 POTEDQ86YR6 584 aa10.28□□□□□ -0.76
SYDE2-201ENST00000234668 AMOTL1Q8IY63 956 aa10.28□□□□□ -0.76
SYDE2-201ENST00000234668 TBCKQ8TEA7 893 aa10.28□□□□□ -0.76
SYDE2-201ENST00000234668 RTFDC1Q9BY42 306 aaPredicted RBP10.28□□□□□ -0.76
SYDE2-201ENST00000234668 LIMA1Q9UHB6 759 aaKnown RBP10.28□□□□□ -0.76
SYDE2-201ENST00000234668 DUSP10Q9Y6W6 482 aa10.28□□□□□ -0.76
SYDE2-201ENST00000234668 PHLPP1O60346 1717 aa10.28□□□□□ -0.76
SYDE2-201ENST00000234668 ARAP2Q8WZ64 1704 aa10.28□□□□□ -0.76
SYDE2-201ENST00000234668 CNTNAP4Q9C0A0 1308 aa10.28□□□□□ -0.76
SYDE2-201ENST00000234668 PALM3A6NDB9 673 aaPredicted RBP10.28□□□□□ -0.76
SYDE2-201ENST00000234668 M0R2N6 131 aa10.28□□□□□ -0.76
SYDE2-201ENST00000234668 SLC16A2P36021 539 aa10.28□□□□□ -0.76
SYDE2-201ENST00000234668 TRAPPC10P48553 1259 aa10.28□□□□□ -0.76
SYDE2-201ENST00000234668 SCNN1DP51172 638 aa10.28□□□□□ -0.76
SYDE2-201ENST00000234668 CYP27A1Q02318 531 aa10.28□□□□□ -0.76
SYDE2-201ENST00000234668 MCM6Q14566 821 aa10.28□□□□□ -0.76
SYDE2-201ENST00000234668 PRR5LQ6MZQ0 368 aa10.28□□□□□ -0.76
SYDE2-201ENST00000234668 ADSSL1Q8N142 457 aa10.28□□□□□ -0.76
SYDE2-201ENST00000234668 POLLQ9UGP5 575 aa10.28□□□□□ -0.76
SYDE2-201ENST00000234668 ZRANB2O95218 330 aaKnown RBP eCLIP10.28□□□□□ -0.76
SYDE2-201ENST00000234668 CHMP4BP1P59074 171 aa10.28□□□□□ -0.76
SYDE2-201ENST00000234668 LRRC41Q15345 812 aa10.28□□□□□ -0.76
SYDE2-201ENST00000234668 ANKRD40Q6AI12 368 aa10.28□□□□□ -0.76
SYDE2-201ENST00000234668 CC2D1AQ6P1N0 951 aaPredicted RBP10.28□□□□□ -0.76
SYDE2-201ENST00000234668 CNGA4Q8IV77 575 aa10.28□□□□□ -0.76
SYDE2-201ENST00000234668 CSGALNACT2Q8N6G5 542 aa10.28□□□□□ -0.76
SYDE2-201ENST00000234668 GLIS3Q8NEA6 775 aa10.28□□□□□ -0.76
SYDE2-201ENST00000234668 TRERF1Q96PN7 1200 aa10.28□□□□□ -0.76
SYDE2-201ENST00000234668 NUDT12Q9BQG2 462 aa10.28□□□□□ -0.76
SYDE2-201ENST00000234668 ARGLU1Q9NWB6 273 aaPredicted RBP10.28□□□□□ -0.76
SYDE2-201ENST00000234668 USP21Q9UK80 565 aa10.28□□□□□ -0.76
SYDE2-201ENST00000234668 REXO2Q9Y3B8 237 aaKnown RBP10.28□□□□□ -0.76
SYDE2-201ENST00000234668 IRS2Q9Y4H2 1338 aa10.27□□□□□ -0.76
SYDE2-201ENST00000234668 FAM196BA6NMK8 535 aa10.27□□□□□ -0.77
SYDE2-201ENST00000234668 TBC1D8O95759 1140 aa10.27□□□□□ -0.77
SYDE2-201ENST00000234668 MRPS25P82663 173 aaKnown RBP10.27□□□□□ -0.77
SYDE2-201ENST00000234668 UBE2SQ16763 222 aa10.27□□□□□ -0.77
SYDE2-201ENST00000234668 SHROOM1Q2M3G4 852 aaPredicted RBP10.27□□□□□ -0.77
SYDE2-201ENST00000234668 UTP14CQ5TAP6 766 aaKnown RBP10.27□□□□□ -0.77
SYDE2-201ENST00000234668 TTBK2Q6IQ55 1244 aa10.27□□□□□ -0.77
SYDE2-201ENST00000234668 ZNF804AQ7Z570 1209 aa10.27□□□□□ -0.77
SYDE2-201ENST00000234668 ANKRD20A12PQ8NF67 263 aa10.27□□□□□ -0.77
SYDE2-201ENST00000234668 CAPZA3Q96KX2 299 aa10.27□□□□□ -0.77
SYDE2-201ENST00000234668 GDAP1L1Q96MZ0 367 aa10.27□□□□□ -0.77
SYDE2-201ENST00000234668 PNKPQ96T60 521 aa10.27□□□□□ -0.77
SYDE2-201ENST00000234668 GOLGA6L9A6NEM1 432 aa10.27□□□□□ -0.77
SYDE2-201ENST00000234668 POTEMA6NI47 508 aa10.27□□□□□ -0.77
SYDE2-201ENST00000234668 ZMYND10O75800 440 aa10.27□□□□□ -0.77
SYDE2-201ENST00000234668 TDP2O95551 362 aa10.27□□□□□ -0.77
SYDE2-201ENST00000234668 IDEP14735 1019 aa10.27□□□□□ -0.77
SYDE2-201ENST00000234668 ARHGAP25P42331 645 aa10.27□□□□□ -0.77
SYDE2-201ENST00000234668 RAD51AP2Q09MP3 1159 aa10.27□□□□□ -0.77
SYDE2-201ENST00000234668 DOK7Q18PE1 504 aa10.27□□□□□ -0.77
SYDE2-201ENST00000234668 ARL6IP4Q66PJ3 421 aaKnown RBP10.27□□□□□ -0.77
SYDE2-201ENST00000234668 RSRC2Q7L4I2 434 aaKnown RBP10.27□□□□□ -0.77
SYDE2-201ENST00000234668 MB21D1Q8N884 522 aa10.27□□□□□ -0.77
SYDE2-201ENST00000234668 KANSL2Q9H9L4 492 aa10.27□□□□□ -0.77
SYDE2-201ENST00000234668 FAM53CQ9NYF3 392 aa10.27□□□□□ -0.77
SYDE2-201ENST00000234668 EPN1Q9Y6I3 576 aaPredicted RBP10.27□□□□□ -0.77
SYDE2-201ENST00000234668 LRRC10BA6NIK2 292 aa10.26□□□□□ -0.77
SYDE2-201ENST00000234668 TUBB4AP04350 444 aa10.26□□□□□ -0.77
SYDE2-201ENST00000234668 CACNB3P54284 484 aa10.26□□□□□ -0.77
SYDE2-201ENST00000234668 ST5P78524 1137 aa10.26□□□□□ -0.77
SYDE2-201ENST00000234668 SOGA3Q5TF21 947 aa10.26□□□□□ -0.77
SYDE2-201ENST00000234668 KRT26Q7Z3Y9 468 aa10.26□□□□□ -0.77
SYDE2-201ENST00000234668 NOA1Q8NC60 698 aaKnown RBP10.26□□□□□ -0.77
SYDE2-201ENST00000234668 GOLGA1Q92805 767 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms