RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 ATP2C1P98194 919 aaPredicted RBP27.15■■□□□ 1.94
RRP9-201ENST00000232888 NONOQ15233 471 aaKnown RBP eCLIP27.15■■□□□ 1.94
RRP9-201ENST00000232888 CAMK4Q16566 473 aa27.15■■□□□ 1.94
RRP9-201ENST00000232888 NOM1Q5C9Z4 860 aaKnown RBP27.15■■□□□ 1.94
RRP9-201ENST00000232888 ILDR2Q71H61 639 aa27.15■■□□□ 1.94
RRP9-201ENST00000232888 FAM13BQ9NYF5 915 aa27.15■■□□□ 1.94
RRP9-201ENST00000232888 TMEM232C9JQI7 657 aa27.14■■□□□ 1.94
RRP9-201ENST00000232888 ZNF174Q15697 407 aa27.14■■□□□ 1.94
RRP9-201ENST00000232888 CDC37Q16543 378 aaPredicted RBP27.14■■□□□ 1.94
RRP9-201ENST00000232888 QRICH1Q2TAL8 776 aa27.14■■□□□ 1.94
RRP9-201ENST00000232888 C9orf131Q5VYM1 1079 aa27.14■■□□□ 1.94
RRP9-201ENST00000232888 ARL6IP4Q66PJ3 421 aaKnown RBP27.14■■□□□ 1.94
RRP9-201ENST00000232888 CHURC1Q8WUH1 139 aa27.14■■□□□ 1.94
RRP9-201ENST00000232888 COA7Q96BR5 231 aa27.14■■□□□ 1.94
RRP9-201ENST00000232888 ZNF112Q9UJU3 913 aa27.14■■□□□ 1.94
RRP9-201ENST00000232888 ADAMTS3O15072 1205 aa27.14■■□□□ 1.93
RRP9-201ENST00000232888 PPP1R11O60927 126 aaPredicted RBP27.14■■□□□ 1.93
RRP9-201ENST00000232888 ZNF202O95125 648 aa27.14■■□□□ 1.93
RRP9-201ENST00000232888 SYKP43405 635 aa27.14■■□□□ 1.93
RRP9-201ENST00000232888 NBPF12Q5TAG4 269 aaPredicted RBP27.14■■□□□ 1.93
RRP9-201ENST00000232888 LAD1O00515 517 aa27.13■■□□□ 1.93
RRP9-201ENST00000232888 DDNO94850 711 aaPredicted RBP27.13■■□□□ 1.93
RRP9-201ENST00000232888 STAT2P52630 851 aa27.13■■□□□ 1.93
RRP9-201ENST00000232888 MCTP2Q6DN12 878 aa27.13■■□□□ 1.93
RRP9-201ENST00000232888 FAM160B2Q86V87 743 aa27.13■■□□□ 1.93
RRP9-201ENST00000232888 ELOA2Q8IYF1 753 aaPredicted RBP27.13■■□□□ 1.93
RRP9-201ENST00000232888 RASGRP4Q8TDF6 673 aa27.13■■□□□ 1.93
RRP9-201ENST00000232888 CUL5Q93034 780 aa27.13■■□□□ 1.93
RRP9-201ENST00000232888 CLIC6Q96NY7 704 aa27.13■■□□□ 1.93
RRP9-201ENST00000232888 AMNQ9BXJ7 453 aa27.13■■□□□ 1.93
RRP9-201ENST00000232888 RBSNQ9H1K0 784 aa27.13■■□□□ 1.93
RRP9-201ENST00000232888 GGA3Q9NZ52 723 aa27.13■■□□□ 1.93
RRP9-201ENST00000232888 ZC3H4Q9UPT8 1303 aaKnown RBP27.12■■□□□ 1.93
RRP9-201ENST00000232888 HIRAP54198 1017 aaPredicted RBP27.12■■□□□ 1.93
RRP9-201ENST00000232888 IKQ13123 557 aaPredicted RBP27.12■■□□□ 1.93
RRP9-201ENST00000232888 PTGDRQ13258 359 aa27.12■■□□□ 1.93
RRP9-201ENST00000232888 SUPT20HL1Q3ZLR7 823 aa27.12■■□□□ 1.93
RRP9-201ENST00000232888 NUP88Q99567 741 aaPredicted RBP27.12■■□□□ 1.93
RRP9-201ENST00000232888 GOLGB1Q14789 3259 aaKnown RBP27.11■■□□□ 1.93
RRP9-201ENST00000232888 DPY19L2Q6NUT2 758 aa27.11■■□□□ 1.93
RRP9-201ENST00000232888 LPAR1Q92633 364 aa27.11■■□□□ 1.93
RRP9-201ENST00000232888 SDF4Q9BRK5 362 aa27.11■■□□□ 1.93
RRP9-201ENST00000232888 KCNH3Q9ULD8 1083 aa27.11■■□□□ 1.93
RRP9-201ENST00000232888 SCAF8Q9UPN6 1271 aaKnown RBP27.11■■□□□ 1.93
RRP9-201ENST00000232888 PCDHA1Q9Y5I3 950 aa27.11■■□□□ 1.93
RRP9-201ENST00000232888 INF2Q27J81 1249 aa27.1■■□□□ 1.93
RRP9-201ENST00000232888 SASS6Q6UVJ0 657 aa27.1■■□□□ 1.93
RRP9-201ENST00000232888 KIAA1683Q9H0B3 1180 aa27.1■■□□□ 1.93
RRP9-201ENST00000232888 PSTPIP2Q9H939 334 aa27.1■■□□□ 1.93
RRP9-201ENST00000232888 FEM1BQ9UK73 627 aa27.1■■□□□ 1.93
RRP9-201ENST00000232888 CAVIN2O95810 425 aa27.09■■□□□ 1.93
RRP9-201ENST00000232888 MCM7P33993 719 aa27.09■■□□□ 1.93
RRP9-201ENST00000232888 NEK8Q86SG6 692 aa27.09■■□□□ 1.93
RRP9-201ENST00000232888 FBXO11Q86XK2 927 aa27.09■■□□□ 1.93
RRP9-201ENST00000232888 SPICE1Q8N0Z3 855 aa27.09■■□□□ 1.93
RRP9-201ENST00000232888 PRR12Q9ULL5 1215 aa27.09■■□□□ 1.93
RRP9-201ENST00000232888 WNT7AO00755 349 aa27.09■■□□□ 1.93
RRP9-201ENST00000232888 CLK2P49760 499 aaKnown RBP27.09■■□□□ 1.93
RRP9-201ENST00000232888 CKAP2LQ8IYA6 745 aa27.09■■□□□ 1.93
RRP9-201ENST00000232888 SCYL3Q8IZE3 742 aa27.09■■□□□ 1.93
RRP9-201ENST00000232888 C4orf32Q8N8J7 132 aa27.09■■□□□ 1.93
RRP9-201ENST00000232888 L3MBTL3Q96JM7 780 aaPredicted RBP27.09■■□□□ 1.93
RRP9-201ENST00000232888 FEZ1Q99689 392 aa27.09■■□□□ 1.93
RRP9-201ENST00000232888 BIN2Q9UBW5 565 aaPredicted RBP27.09■■□□□ 1.93
RRP9-201ENST00000232888 PRPHP41219 470 aa27.08■■□□□ 1.93
RRP9-201ENST00000232888 TYRO3Q06418 890 aa27.08■■□□□ 1.93
RRP9-201ENST00000232888 KIAA1755Q5JYT7 1200 aa27.08■■□□□ 1.93
RRP9-201ENST00000232888 FAM83BQ5T0W9 1011 aa27.08■■□□□ 1.93
RRP9-201ENST00000232888 WDR18Q9BV38 432 aa27.08■■□□□ 1.93
RRP9-201ENST00000232888 CSRNP2Q9H175 543 aa27.08■■□□□ 1.93
RRP9-201ENST00000232888 UVSSAQ2YD98 709 aa27.07■■□□□ 1.92
RRP9-201ENST00000232888 PYM1Q9BRP8 204 aaKnown RBP27.07■■□□□ 1.92
RRP9-201ENST00000232888 AS3MTQ9HBK9 375 aa27.07■■□□□ 1.92
RRP9-201ENST00000232888 WDR46O15213 610 aaKnown RBP27.06■■□□□ 1.92
RRP9-201ENST00000232888 GRIN3BO60391 1043 aa27.06■■□□□ 1.92
RRP9-201ENST00000232888 USP14P54578 494 aa27.06■■□□□ 1.92
RRP9-201ENST00000232888 JAKMIP3Q5VZ66 844 aa27.06■■□□□ 1.92
RRP9-201ENST00000232888 NAP1L4Q99733 375 aaKnown RBP27.06■■□□□ 1.92
RRP9-201ENST00000232888 HOOK1Q9UJC3 728 aaKnown RBP27.06■■□□□ 1.92
RRP9-201ENST00000232888 ATAD5Q96QE3 1844 aa27.06■■□□□ 1.92
RRP9-201ENST00000232888 LONP1P36776 959 aaKnown RBP27.05■■□□□ 1.92
RRP9-201ENST00000232888 TBCKQ8TEA7 893 aa27.05■■□□□ 1.92
RRP9-201ENST00000232888 ANP32BQ92688 251 aaKnown RBP27.05■■□□□ 1.92
RRP9-201ENST00000232888 CCDC34Q96HJ3 373 aa27.05■■□□□ 1.92
RRP9-201ENST00000232888 GRIN1Q05586 938 aa27.05■■□□□ 1.92
RRP9-201ENST00000232888 KANK3Q6NY19 840 aa27.05■■□□□ 1.92
RRP9-201ENST00000232888 DCPSQ96C86 337 aaKnown RBP27.05■■□□□ 1.92
RRP9-201ENST00000232888 RANBP17Q9H2T7 1088 aaKnown RBP27.05■■□□□ 1.92
RRP9-201ENST00000232888 PICK1Q9NRD5 415 aa27.05■■□□□ 1.92
RRP9-201ENST00000232888 USP25Q9UHP3 1055 aa27.05■■□□□ 1.92
RRP9-201ENST00000232888 INPP5BP32019 993 aa27.04■■□□□ 1.92
RRP9-201ENST00000232888 AP3B2Q13367 1082 aa27.04■■□□□ 1.92
RRP9-201ENST00000232888 NOL9Q5SY16 702 aaKnown RBP27.04■■□□□ 1.92
RRP9-201ENST00000232888 GLIS2Q9BZE0 524 aaPredicted RBP27.04■■□□□ 1.92
RRP9-201ENST00000232888 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.04■■□□□ 1.92
RRP9-201ENST00000232888 MRVI1Q9Y6F6 885 aa27.04■■□□□ 1.92
RRP9-201ENST00000232888 GPR162Q16538 588 aa27.03■■□□□ 1.92
RRP9-201ENST00000232888 KRBA2Q6ZNG9 492 aa27.03■■□□□ 1.92
RRP9-201ENST00000232888 USP50Q70EL3 339 aaPredicted RBP27.03■■□□□ 1.92
RRP9-201ENST00000232888 ZC3H15Q8WU90 426 aaKnown RBP27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms