RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Trim12cD3Z3L3 497 aa9.57□□□□□ -0.88
Trim40-203ENSMUST00000172711 Art2aP17981 287 aa9.57□□□□□ -0.88
Trim40-203ENSMUST00000172711 Ftl1P29391 183 aa9.57□□□□□ -0.88
Trim40-203ENSMUST00000172711 Pcmtd1P59913 357 aa9.57□□□□□ -0.88
Trim40-203ENSMUST00000172711 Sap30bpQ02614 308 aa9.57□□□□□ -0.88
Trim40-203ENSMUST00000172711 Usp50Q6P8X6 390 aa9.57□□□□□ -0.88
Trim40-203ENSMUST00000172711 Usp6nlQ80XC3 819 aa9.57□□□□□ -0.88
Trim40-203ENSMUST00000172711 Cdkn2aipQ8BI72 563 aa9.57□□□□□ -0.88
Trim40-203ENSMUST00000172711 Iws1Q8C1D8 766 aa9.57□□□□□ -0.88
Trim40-203ENSMUST00000172711 Brf1Q8CFK2 676 aa9.57□□□□□ -0.88
Trim40-203ENSMUST00000172711 Mrpl58Q8R035 206 aa9.57□□□□□ -0.88
Trim40-203ENSMUST00000172711 GldcQ91W43 1025 aa9.57□□□□□ -0.88
Trim40-203ENSMUST00000172711 Eaf2Q91ZD6 262 aa9.57□□□□□ -0.88
Trim40-203ENSMUST00000172711 Znf687Q9D2D7 1237 aa9.57□□□□□ -0.88
Trim40-203ENSMUST00000172711 Alg13Q9D8C3 1166 aaKnown RBP9.57□□□□□ -0.88
Trim40-203ENSMUST00000172711 Cep290Q6A078 2472 aa9.57□□□□□ -0.88
Trim40-203ENSMUST00000172711 Zscan4-ps1A0A1C7CYV3 506 aa9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 Alppl2P24823 529 aa9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 Gnat2P50149 354 aa9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 Kcnh8P59111 1102 aa9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 Lrrc14bQ3UJB3 510 aa9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 Rnpc3Q3UZ01 514 aaKnown RBP9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 Tshz1Q5DTH5 1084 aa9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 Myo19Q5SV80 963 aa9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 Gas6Q61592 674 aa9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 NfrkbQ6PIJ4 1296 aaKnown RBP9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 Ssh1Q76I79 1042 aa9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 BC048507Q80ZS7 89 aa9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 Cnksr3Q8BMA3 555 aa9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 Mb21d2Q8C525 428 aa9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 HnrnpuQ8VEK3 800 aaKnown RBP9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 DaglbQ91WC9 669 aa9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 Col25a1Q99MQ5 666 aa9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 Armcx1Q9CX83 456 aa9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 PdhbQ9D051 359 aa9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 Lonrf3Q9D4H7 753 aa9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 Tbx20Q9ES03 445 aa9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 Msgn1Q9JK54 188 aa9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 Wdr33Q8K4P0 1330 aaKnown RBP9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 Unc80Q8BLN6 3261 aa9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 Il13ra2O88786 383 aa9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 Pde11aP0C1Q2 933 aa9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 NapbP28663 298 aa9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 Kcnn2P58390 839 aa9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 Eepd1Q3TGW2 569 aa9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 Limch1Q3UH68 1057 aa9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 Kctd1Q5M956 257 aa9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 Fbxo10Q7TQF2 950 aa9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 Znf618Q80YY7 953 aaKnown RBP9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 Tdp1Q8BJ37 609 aa9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 Zhx2Q8C0C0 836 aaKnown RBP9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 Bst2Q8R2Q8 172 aa9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 TMEM121BQ99MX7 572 aa9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 Kdm8Q9CXT6 414 aa9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 Trmt112Q9DCG9 125 aa9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 Ppp2r3dQ9Z176 491 aa9.56□□□□□ -0.88
Trim40-203ENSMUST00000172711 Dnajc25A2ALW5 357 aa9.55□□□□□ -0.88
Trim40-203ENSMUST00000172711 Gm20503G3UZK1 150 aa9.55□□□□□ -0.88
Trim40-203ENSMUST00000172711 Defa-rs2P17534 91 aa9.55□□□□□ -0.88
Trim40-203ENSMUST00000172711 Rbp3P49194 1234 aa9.55□□□□□ -0.88
Trim40-203ENSMUST00000172711 Srebf2Q3U1N2 1130 aa9.55□□□□□ -0.88
Trim40-203ENSMUST00000172711 Zfp943Q6NZP4 507 aa9.55□□□□□ -0.88
Trim40-203ENSMUST00000172711 Zdhhc15Q8BGJ0 337 aa9.55□□□□□ -0.88
Trim40-203ENSMUST00000172711 MslnlQ8C160 685 aa9.55□□□□□ -0.88
Trim40-203ENSMUST00000172711 MyripQ8K3I4 856 aa9.55□□□□□ -0.88
Trim40-203ENSMUST00000172711 Kiaa1024Q8K3V7 917 aa9.55□□□□□ -0.88
Trim40-203ENSMUST00000172711 Bmp2kQ91Z96 1138 aa9.55□□□□□ -0.88
Trim40-203ENSMUST00000172711 Gmcl1Q920G9 524 aa9.55□□□□□ -0.88
Trim40-203ENSMUST00000172711 Tmem39aQ9CYC3 486 aa9.55□□□□□ -0.88
Trim40-203ENSMUST00000172711 Clip2Q9Z0H8 1047 aa9.55□□□□□ -0.88
Trim40-203ENSMUST00000172711 Rlbp1Q9Z275 317 aa9.55□□□□□ -0.88
Trim40-203ENSMUST00000172711 TroapB7ZNG4 668 aa9.54□□□□□ -0.88
Trim40-203ENSMUST00000172711 Zscan18E9PUD6 809 aa9.54□□□□□ -0.88
Trim40-203ENSMUST00000172711 Ankrd35E9Q9D8 996 aa9.54□□□□□ -0.88
Trim40-203ENSMUST00000172711 Slc1a4O35874 532 aa9.54□□□□□ -0.88
Trim40-203ENSMUST00000172711 Gp6P0C191 313 aa9.54□□□□□ -0.88
Trim40-203ENSMUST00000172711 Mdm2P23804 489 aa9.54□□□□□ -0.88
Trim40-203ENSMUST00000172711 Inpp5jP59644 1003 aa9.54□□□□□ -0.88
Trim40-203ENSMUST00000172711 Ttbk2Q3UVR3 1243 aa9.54□□□□□ -0.88
Trim40-203ENSMUST00000172711 Vgll2Q8BGW8 322 aa9.54□□□□□ -0.88
Trim40-203ENSMUST00000172711 Smad3Q8BUN5 425 aa9.54□□□□□ -0.88
Trim40-203ENSMUST00000172711 Usp38Q8BW70 1042 aa9.54□□□□□ -0.88
Trim40-203ENSMUST00000172711 Atp5c1Q91VR2 298 aaKnown RBP9.54□□□□□ -0.88
Trim40-203ENSMUST00000172711 Susd3Q9D176 269 aa9.54□□□□□ -0.88
Trim40-203ENSMUST00000172711 Tmx2Q9D710 295 aaKnown RBP9.54□□□□□ -0.88
Trim40-203ENSMUST00000172711 Galk1Q9R0N0 392 aa9.54□□□□□ -0.88
Trim40-203ENSMUST00000172711 Twf2Q9Z0P5 349 aaKnown RBP9.54□□□□□ -0.88
Trim40-203ENSMUST00000172711 Sall1Q9ER74 1322 aa9.53□□□□□ -0.88
Trim40-203ENSMUST00000172711 Pbx2O35984 430 aa9.53□□□□□ -0.88
Trim40-203ENSMUST00000172711 LdhbP16125 334 aaKnown RBP9.53□□□□□ -0.88
Trim40-203ENSMUST00000172711 Phka1P18826 1241 aa9.53□□□□□ -0.88
Trim40-203ENSMUST00000172711 Cst8P32766 142 aa9.53□□□□□ -0.88
Trim40-203ENSMUST00000172711 Defb25Q30KN8 71 aa9.53□□□□□ -0.88
Trim40-203ENSMUST00000172711 Gm1587Q3UT80 123 aa9.53□□□□□ -0.88
Trim40-203ENSMUST00000172711 Adgrg6Q6F3F9 1165 aa9.53□□□□□ -0.88
Trim40-203ENSMUST00000172711 Ptpdc1Q6NZK8 747 aa9.53□□□□□ -0.88
Trim40-203ENSMUST00000172711 Cypt4Q6P925 153 aa9.53□□□□□ -0.88
Trim40-203ENSMUST00000172711 Tekt3Q6X6Z7 490 aa9.53□□□□□ -0.88
Trim40-203ENSMUST00000172711 Tex2Q6ZPJ0 1128 aaKnown RBP9.53□□□□□ -0.88
Trim40-203ENSMUST00000172711 Brd2Q7JJ13 798 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 68.8 ms