RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Ano9P86044 747 aa17.08■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Adat2Q6P6J0 191 aa17.08■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Me3Q8BMF3 604 aa17.08■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Kctd6Q8BNL5 237 aa17.08■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Clec4gQ8BNX1 294 aa17.08■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Trpd52l3Q9CQ14 231 aa17.08■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Strn3Q9ERG2 796 aa17.08■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Gm14525B1AZA0 212 aa17.08■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Gm2012B1B0R1 212 aa17.08■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Xrcc5P27641 732 aa17.08■□□□□ 0.32
Ubr3-201ENSMUST00000055758 YwhagP61982 247 aaKnown RBP17.08■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Tsc22d1P62500 1077 aa17.08■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Hipk4Q3V016 616 aa17.08■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Fam217aQ9D9W6 419 aa17.08■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Tsc1Q9EP53 1161 aa17.08■□□□□ 0.32
Ubr3-201ENSMUST00000055758 H2-OaQ9QWV1 250 aa17.08■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Raph1F2Z3U3 1266 aa17.07■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Psmc2P46471 433 aa17.07■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Eps15l1Q60902 907 aaKnown RBP17.07■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Slc25a24Q8BMD8 475 aa17.07■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Trim8Q99PJ2 551 aa17.07■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Tmed2Q9R0Q3 201 aa17.07■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Map3k1P53349 1493 aa17.07■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Actn4P57780 912 aaKnown RBP17.07■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Klc4Q9DBS5 619 aa17.07■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Kif9Q9WV04 790 aa17.07■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Snrpa1P57784 255 aaKnown RBP17.07■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Tmtc2Q56A06 836 aa17.07■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Cttnbp2nlQ99LJ0 638 aa17.07■□□□□ 0.32
Ubr3-201ENSMUST00000055758 EspnlQ3UYR4 1005 aa17.07■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Fchsd1Q6PFY1 688 aa17.07■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Atf7ipQ7TT18 1306 aa17.07■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Slc27a3O88561 667 aa17.07■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Acot10Q32MW3 439 aa17.07■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Llgl2Q3TJ91 1027 aa17.07■□□□□ 0.32
Ubr3-201ENSMUST00000055758 PrimpolQ6P1E7 537 aa17.07■□□□□ 0.32
Ubr3-201ENSMUST00000055758 ArhgdiaQ99PT1 204 aaKnown RBP17.07■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Appbp2Q9DAX9 585 aa17.07■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Srrm1Q52KI8 946 aaKnown RBP17.07■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Tor1aip1Q921T2 595 aaKnown RBP17.07■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Mapkapk5O54992 473 aa17.06■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Palb2Q3U0P1 1104 aa17.06■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Nlrp4fQ66X05 959 aa17.06■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Gpcpd1Q8C0L9 675 aa17.06■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Tpcn1Q9EQJ0 817 aa17.06■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Ccdc88cQ6VGS5 2009 aa17.06■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Camsap3Q80VC9 1252 aa17.06■□□□□ 0.32
Ubr3-201ENSMUST00000055758 A0A1W2P7S8 802 aa17.06■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Trim71Q1PSW8 855 aaKnown RBP17.06■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Cdc5lQ6A068 802 aaKnown RBP17.06■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Clic6Q8BHB9 596 aa17.06■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Gpc4P51655 557 aa17.06■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Cracr2bQ80ZJ8 394 aa17.06■□□□□ 0.32
Ubr3-201ENSMUST00000055758 CpvlQ9D3S9 478 aa17.06■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Cyth3O08967 399 aa17.06■□□□□ 0.32
Ubr3-201ENSMUST00000055758 TsksO54887 585 aa17.06■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Q66JV7 365 aa17.06■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Naip7Q9JIB3 1402 aa17.05■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Naip6Q9JIB6 1403 aa17.05■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Prl3d3A0A0M6L0J6 224 aa17.05■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Trpc5Q9QX29 975 aa17.05■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Aldh18a1Q9Z110 795 aa17.05■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Ankrd50F7BE84 1390 aa17.05■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Gm10354K7N6A0 256 aa17.05■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Zscan2Q07230 614 aa17.05■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Yars2Q8BYL4 472 aaKnown RBP17.05■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Wdr24Q8CFJ9 790 aa17.05■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Gm3415J3QMS8 315 aa17.05■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Fam163aQ8CAA5 168 aa17.05■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Ppp4r1Q8K2V1 951 aa17.05■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Gm3404Q9D506 307 aa17.05■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Kdm2bQ6P1G2 1309 aa17.05■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Sult6b1P0CC03 303 aa17.05■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Fam81aQ3UXZ6 364 aa17.05■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Slc35f6Q8VE96 372 aa17.05■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Atg4a-psA0A0G2JFS9 396 aa17.05■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Cyp26a1O55127 497 aa17.05■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Zmym1Q3TJB1 983 aa17.05■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Nlrx1Q3TL44 975 aa17.05■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Atg4aQ8C9S8 396 aa17.05■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Cd209bQ8CJ91 325 aa17.05■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Atp1a1Q8VDN2 1023 aaKnown RBP17.05■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Q922C1 641 aa17.05■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Ska2Q9CR46 120 aa17.05■□□□□ 0.32
Ubr3-201ENSMUST00000055758 A630010A05RikA9C473 232 aa17.04■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Kifc3O35231 824 aa17.04■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Nr1h4Q60641 488 aa17.04■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Krt74Q6IFZ9 495 aa17.04■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Zfp418Q8BFS8 652 aa17.04■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Enox1Q8BHR2 643 aaKnown RBP17.04■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Trim38Q5SZ99 471 aa17.04■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Wbp4Q61048 376 aa17.04■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Slc39a6Q8C145 765 aa17.04■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Tnni3P48787 211 aa17.04■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Krt39Q6IFX4 482 aa17.04■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Islr2Q5RKR3 745 aa17.04■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Nsmce1Q9D720 266 aa17.04■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Cib4Q9D9N5 185 aa17.04■□□□□ 0.32
Ubr3-201ENSMUST00000055758 Cd72P21855 354 aa17.04■□□□□ 0.32
Ubr3-201ENSMUST00000055758 PapolbQ9WVP6 641 aa17.04■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms