RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 IGKV6D-41A0A0C4DH26 115 aa20.3■□□□□ 0.84
PHGDH-226ENST00000641756 CDC25AP30304 524 aa20.3■□□□□ 0.84
PHGDH-226ENST00000641756 SHMT1P34896 483 aa20.3■□□□□ 0.84
PHGDH-226ENST00000641756 UBASH3AP57075 661 aa20.3■□□□□ 0.84
PHGDH-226ENST00000641756 EZH2Q15910 746 aaKnown RBP20.3■□□□□ 0.84
PHGDH-226ENST00000641756 ZMYND12Q9H0C1 365 aa20.3■□□□□ 0.84
PHGDH-226ENST00000641756 TMEM60Q9H2L4 133 aa20.3■□□□□ 0.84
PHGDH-226ENST00000641756 UQCRHLA0A096LP55 91 aa20.3■□□□□ 0.84
PHGDH-226ENST00000641756 SMCO2A6NFE2 343 aa20.3■□□□□ 0.84
PHGDH-226ENST00000641756 NEMFO60524 1076 aa20.3■□□□□ 0.84
PHGDH-226ENST00000641756 UQCRHP07919 91 aa20.3■□□□□ 0.84
PHGDH-226ENST00000641756 SKILP12757 684 aa20.3■□□□□ 0.84
PHGDH-226ENST00000641756 RBM5P52756 815 aaKnown RBP eCLIP20.3■□□□□ 0.84
PHGDH-226ENST00000641756 E2F4Q16254 413 aa20.3■□□□□ 0.84
PHGDH-226ENST00000641756 ARL6IP4Q66PJ3 421 aaKnown RBP20.3■□□□□ 0.84
PHGDH-226ENST00000641756 IMPACTQ9P2X3 320 aa20.3■□□□□ 0.84
PHGDH-226ENST00000641756 SWAP70Q9UH65 585 aa20.3■□□□□ 0.84
PHGDH-226ENST00000641756 DACH1Q9UI36 760 aa20.3■□□□□ 0.84
PHGDH-226ENST00000641756 SCN9AQ15858 1988 aa20.29■□□□□ 0.84
PHGDH-226ENST00000641756 MPHOSPH10O00566 681 aaKnown RBP20.29■□□□□ 0.84
PHGDH-226ENST00000641756 HLA-DOAP06340 250 aa20.29■□□□□ 0.84
PHGDH-226ENST00000641756 CCZ1BP86790 482 aa20.29■□□□□ 0.84
PHGDH-226ENST00000641756 CCZ1P86791 482 aaPredicted RBP20.29■□□□□ 0.84
PHGDH-226ENST00000641756 TCP10Q12799 353 aa20.29■□□□□ 0.84
PHGDH-226ENST00000641756 DPYDQ12882 1025 aa20.29■□□□□ 0.84
PHGDH-226ENST00000641756 GPCPD1Q9NPB8 672 aa20.29■□□□□ 0.84
PHGDH-226ENST00000641756 GSDMDP57764 484 aa20.29■□□□□ 0.84
PHGDH-226ENST00000641756 EN1Q05925 392 aaPredicted RBP20.29■□□□□ 0.84
PHGDH-226ENST00000641756 SLC15A2Q16348 729 aa20.29■□□□□ 0.84
PHGDH-226ENST00000641756 PTPN21Q16825 1174 aa20.29■□□□□ 0.84
PHGDH-226ENST00000641756 CFAP100Q494V2 611 aa20.29■□□□□ 0.84
PHGDH-226ENST00000641756 IQUBQ8NA54 791 aa20.29■□□□□ 0.84
PHGDH-226ENST00000641756 CCDC12Q8WUD4 166 aaPredicted RBP20.29■□□□□ 0.84
PHGDH-226ENST00000641756 BLZF1Q9H2G9 400 aa20.29■□□□□ 0.84
PHGDH-226ENST00000641756 NFE2L3Q9Y4A8 694 aa20.29■□□□□ 0.84
PHGDH-226ENST00000641756 LONP1P36776 959 aaKnown RBP20.28■□□□□ 0.84
PHGDH-226ENST00000641756 AOC3Q16853 763 aa20.28■□□□□ 0.84
PHGDH-226ENST00000641756 DACT2Q5SW24 774 aa20.28■□□□□ 0.84
PHGDH-226ENST00000641756 SOGA3Q5TF21 947 aa20.28■□□□□ 0.84
PHGDH-226ENST00000641756 STRIP1Q5VSL9 837 aa20.28■□□□□ 0.84
PHGDH-226ENST00000641756 ZDHHC15Q96MV8 337 aa20.28■□□□□ 0.84
PHGDH-226ENST00000641756 MED15Q96RN5 788 aa20.28■□□□□ 0.84
PHGDH-226ENST00000641756 RIOX1Q9H6W3 641 aa20.28■□□□□ 0.84
PHGDH-226ENST00000641756 C6orf50Q9HD87 102 aa20.28■□□□□ 0.84
PHGDH-226ENST00000641756 TTLL1O95922 423 aa20.27■□□□□ 0.84
PHGDH-226ENST00000641756 SMARCA1P28370 1054 aa20.27■□□□□ 0.84
PHGDH-226ENST00000641756 ATP2B2Q01814 1243 aa20.27■□□□□ 0.84
PHGDH-226ENST00000641756 PDXDC2PQ6P474 469 aa20.27■□□□□ 0.84
PHGDH-226ENST00000641756 FAM196BA6NMK8 535 aa20.27■□□□□ 0.84
PHGDH-226ENST00000641756 PP2D1A8MPX8 630 aa20.27■□□□□ 0.84
PHGDH-226ENST00000641756 CD44P16070 742 aaKnown RBP20.27■□□□□ 0.84
PHGDH-226ENST00000641756 KARSQ15046 597 aaKnown RBP20.27■□□□□ 0.84
PHGDH-226ENST00000641756 ARMCX5Q6P1M9 558 aa20.27■□□□□ 0.84
PHGDH-226ENST00000641756 DTHD1Q6ZMT9 781 aa20.27■□□□□ 0.84
PHGDH-226ENST00000641756 SMYD4Q8IYR2 804 aaPredicted RBP20.27■□□□□ 0.84
PHGDH-226ENST00000641756 ENOX1Q8TC92 643 aaKnown RBP20.27■□□□□ 0.84
PHGDH-226ENST00000641756 TMEM232C9JQI7 657 aa20.26■□□□□ 0.83
PHGDH-226ENST00000641756 CBFA2T2O43439 604 aa20.26■□□□□ 0.83
PHGDH-226ENST00000641756 GNA11P29992 359 aa20.26■□□□□ 0.83
PHGDH-226ENST00000641756 ASPRV1Q53RT3 343 aa20.26■□□□□ 0.83
PHGDH-226ENST00000641756 KLHL10Q6JEL2 608 aa20.26■□□□□ 0.83
PHGDH-226ENST00000641756 C16orf45Q96MC5 204 aaPredicted RBP20.26■□□□□ 0.83
PHGDH-226ENST00000641756 BIN2Q9UBW5 565 aaPredicted RBP20.26■□□□□ 0.83
PHGDH-226ENST00000641756 SNHG28P0DPA3 235 aa20.26■□□□□ 0.83
PHGDH-226ENST00000641756 NONOQ15233 471 aaKnown RBP eCLIP20.26■□□□□ 0.83
PHGDH-226ENST00000641756 LETM2Q2VYF4 491 aa20.26■□□□□ 0.83
PHGDH-226ENST00000641756 JAKMIP3Q5VZ66 844 aa20.26■□□□□ 0.83
PHGDH-226ENST00000641756 KRT25Q7Z3Z0 450 aa20.26■□□□□ 0.83
PHGDH-226ENST00000641756 CNKSR1Q969H4 720 aa20.26■□□□□ 0.83
PHGDH-226ENST00000641756 COA7Q96BR5 231 aa20.26■□□□□ 0.83
PHGDH-226ENST00000641756 MTRQ99707 1265 aa20.26■□□□□ 0.83
PHGDH-226ENST00000641756 DNAJC18Q9H819 358 aa20.26■□□□□ 0.83
PHGDH-226ENST00000641756 TMEM260Q9NX78 707 aa20.26■□□□□ 0.83
PHGDH-226ENST00000641756 CCNT1O60563 726 aaKnown RBP20.25■□□□□ 0.83
PHGDH-226ENST00000641756 CDK11BP21127 795 aaKnown RBP20.25■□□□□ 0.83
PHGDH-226ENST00000641756 TXLNAP40222 546 aa20.25■□□□□ 0.83
PHGDH-226ENST00000641756 STX17P56962 302 aa20.25■□□□□ 0.83
PHGDH-226ENST00000641756 CUL4BQ13620 913 aa20.25■□□□□ 0.83
PHGDH-226ENST00000641756 FAM177A1Q8N128 213 aaPredicted RBP20.25■□□□□ 0.83
PHGDH-226ENST00000641756 GSDMAQ96QA5 445 aa20.25■□□□□ 0.83
PHGDH-226ENST00000641756 SAMSN1Q9NSI8 373 aaKnown RBP20.25■□□□□ 0.83
PHGDH-226ENST00000641756 STK32BQ9NY57 414 aa20.25■□□□□ 0.83
PHGDH-226ENST00000641756 MYO3BQ8WXR4 1341 aa20.25■□□□□ 0.83
PHGDH-226ENST00000641756 GOLGB1Q14789 3259 aaKnown RBP20.25■□□□□ 0.83
PHGDH-226ENST00000641756 DDTLA6NHG4 134 aaPredicted RBP20.24■□□□□ 0.83
PHGDH-226ENST00000641756 USP27XA6NNY8 438 aa20.24■□□□□ 0.83
PHGDH-226ENST00000641756 MYO1BO43795 1136 aa20.24■□□□□ 0.83
PHGDH-226ENST00000641756 TPD52L1Q16890 204 aaPredicted RBP20.24■□□□□ 0.83
PHGDH-226ENST00000641756 SHROOM1Q2M3G4 852 aaPredicted RBP20.24■□□□□ 0.83
PHGDH-226ENST00000641756 TTBK2Q6IQ55 1244 aa20.24■□□□□ 0.83
PHGDH-226ENST00000641756 CCDC150Q8NCX0 1101 aa20.24■□□□□ 0.83
PHGDH-226ENST00000641756 INTS13Q9NVM9 706 aa20.24■□□□□ 0.83
PHGDH-226ENST00000641756 FAM198AQ9UFP1 575 aa20.24■□□□□ 0.83
PHGDH-226ENST00000641756 RGPD3A6NKT7 1758 aaPredicted RBP20.24■□□□□ 0.83
PHGDH-226ENST00000641756 RGPD4Q7Z3J3 1758 aa20.24■□□□□ 0.83
PHGDH-226ENST00000641756 ZNF18P17022 549 aa20.24■□□□□ 0.83
PHGDH-226ENST00000641756 STAT6P42226 847 aa20.24■□□□□ 0.83
PHGDH-226ENST00000641756 ZNF543Q08ER8 600 aa20.24■□□□□ 0.83
PHGDH-226ENST00000641756 C7orf43Q8WVR3 580 aa20.24■□□□□ 0.83
PHGDH-226ENST00000641756 PYM1Q9BRP8 204 aaKnown RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms