RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 PLSCR1O15162 318 aa13.3□□□□□ -0.28
RBFOX1-224ENST00000641259 SRGAP2O75044 1071 aa13.3□□□□□ -0.28
RBFOX1-224ENST00000641259 MYL5Q02045 173 aa13.3□□□□□ -0.28
RBFOX1-224ENST00000641259 CAVIN4Q5BKX8 364 aa13.3□□□□□ -0.28
RBFOX1-224ENST00000641259 MB21D2Q8IYB1 491 aaPredicted RBP13.3□□□□□ -0.28
RBFOX1-224ENST00000641259 SLF1Q9BQI6 1058 aa13.3□□□□□ -0.28
RBFOX1-224ENST00000641259 PCDHA7Q9UN72 937 aa13.3□□□□□ -0.28
RBFOX1-224ENST00000641259 A0A0U1RQJ8 604 aa13.3□□□□□ -0.28
RBFOX1-224ENST00000641259 LRRIQ3A6PVS8 624 aaPredicted RBP13.3□□□□□ -0.28
RBFOX1-224ENST00000641259 GSG1L2A8MUP6 293 aa13.3□□□□□ -0.28
RBFOX1-224ENST00000641259 MAATS1Q7Z4T9 603 aa13.3□□□□□ -0.28
RBFOX1-224ENST00000641259 KIAA1328Q86T90 577 aa13.3□□□□□ -0.28
RBFOX1-224ENST00000641259 ACRBPQ8NEB7 543 aa13.3□□□□□ -0.28
RBFOX1-224ENST00000641259 SPDL1Q96EA4 605 aa13.3□□□□□ -0.28
RBFOX1-224ENST00000641259 YIPF3Q9GZM5 350 aa13.3□□□□□ -0.28
RBFOX1-224ENST00000641259 NEDD4P46934 1319 aa13.3□□□□□ -0.28
RBFOX1-224ENST00000641259 GOLGA6L9A6NEM1 432 aa13.29□□□□□ -0.28
RBFOX1-224ENST00000641259 CTDNEP1O95476 244 aa13.29□□□□□ -0.28
RBFOX1-224ENST00000641259 CCT6AP40227 531 aaKnown RBP13.29□□□□□ -0.28
RBFOX1-224ENST00000641259 CCDC121Q6ZUS5 278 aa13.29□□□□□ -0.28
RBFOX1-224ENST00000641259 VPS37DQ86XT2 251 aa13.29□□□□□ -0.28
RBFOX1-224ENST00000641259 C8orf76Q96K31 380 aa13.29□□□□□ -0.28
RBFOX1-224ENST00000641259 MRFAP1Q9Y605 127 aa13.29□□□□□ -0.28
RBFOX1-224ENST00000641259 ZNF213O14771 459 aa13.29□□□□□ -0.28
RBFOX1-224ENST00000641259 GPSM2P81274 684 aa13.29□□□□□ -0.28
RBFOX1-224ENST00000641259 EVX2Q03828 476 aa13.29□□□□□ -0.28
RBFOX1-224ENST00000641259 CCDC93Q567U6 631 aa13.29□□□□□ -0.28
RBFOX1-224ENST00000641259 CYB5R4Q7L1T6 521 aa13.29□□□□□ -0.28
RBFOX1-224ENST00000641259 NOA1Q8NC60 698 aaKnown RBP13.29□□□□□ -0.28
RBFOX1-224ENST00000641259 NRXN2Q9P2S2 1712 aa13.29□□□□□ -0.28
RBFOX1-224ENST00000641259 COL11A2P13942 1736 aaPredicted RBP13.29□□□□□ -0.28
RBFOX1-224ENST00000641259 PRDX5P30044 214 aa13.29□□□□□ -0.28
RBFOX1-224ENST00000641259 CTDSPL2Q05D32 466 aa13.29□□□□□ -0.28
RBFOX1-224ENST00000641259 SDR42E1Q8WUS8 393 aa13.29□□□□□ -0.28
RBFOX1-224ENST00000641259 THOC1Q96FV9 657 aaKnown RBP13.29□□□□□ -0.28
RBFOX1-224ENST00000641259 SENP2Q9HC62 589 aa13.29□□□□□ -0.28
RBFOX1-224ENST00000641259 FAM53CQ9NYF3 392 aa13.29□□□□□ -0.28
RBFOX1-224ENST00000641259 ANKIB1Q9P2G1 1089 aa13.29□□□□□ -0.28
RBFOX1-224ENST00000641259 BIN2Q9UBW5 565 aaPredicted RBP13.29□□□□□ -0.28
RBFOX1-224ENST00000641259 SPTLC2O15270 562 aa13.28□□□□□ -0.28
RBFOX1-224ENST00000641259 CAND2O75155 1236 aa13.28□□□□□ -0.28
RBFOX1-224ENST00000641259 AP1G2O75843 785 aa13.28□□□□□ -0.28
RBFOX1-224ENST00000641259 RNASE9P60153 205 aaKnown RBP13.28□□□□□ -0.28
RBFOX1-224ENST00000641259 DYNLL1P63167 89 aaKnown RBP13.28□□□□□ -0.28
RBFOX1-224ENST00000641259 MSL1Q68DK7 614 aa13.28□□□□□ -0.28
RBFOX1-224ENST00000641259 IFNL3Q8IZI9 196 aa13.28□□□□□ -0.28
RBFOX1-224ENST00000641259 KIF9Q9HAQ2 790 aa13.28□□□□□ -0.28
RBFOX1-224ENST00000641259 MED4Q9NPJ6 270 aa13.28□□□□□ -0.28
RBFOX1-224ENST00000641259 CHD4Q14839 1912 aa13.28□□□□□ -0.28
RBFOX1-224ENST00000641259 LTBP1Q14766 1721 aa13.28□□□□□ -0.28
RBFOX1-224ENST00000641259 CUTAO60888 179 aa13.28□□□□□ -0.28
RBFOX1-224ENST00000641259 CYP7A1P22680 504 aa13.28□□□□□ -0.28
RBFOX1-224ENST00000641259 GRIK5Q16478 980 aa13.28□□□□□ -0.28
RBFOX1-224ENST00000641259 BEND6Q5SZJ8 279 aaPredicted RBP13.28□□□□□ -0.28
RBFOX1-224ENST00000641259 TRIM65Q6PJ69 517 aa13.28□□□□□ -0.28
RBFOX1-224ENST00000641259 IFT81Q8WYA0 676 aa13.28□□□□□ -0.28
RBFOX1-224ENST00000641259 OSBPL5Q9H0X9 879 aaPredicted RBP13.28□□□□□ -0.28
RBFOX1-224ENST00000641259 SPATS2LQ9NUQ6 558 aaKnown RBP13.28□□□□□ -0.28
RBFOX1-224ENST00000641259 CDC23Q9UJX2 597 aa13.28□□□□□ -0.28
RBFOX1-224ENST00000641259 NFE2L3Q9Y4A8 694 aa13.28□□□□□ -0.28
RBFOX1-224ENST00000641259 TIAM2Q8IVF5 1701 aa13.28□□□□□ -0.28
RBFOX1-224ENST00000641259 BUB1BO60566 1050 aaPredicted RBP13.28□□□□□ -0.28
RBFOX1-224ENST00000641259 HMGB1P09429 215 aaKnown RBP13.28□□□□□ -0.28
RBFOX1-224ENST00000641259 RXRAP19793 462 aa13.28□□□□□ -0.28
RBFOX1-224ENST00000641259 HIBADHP31937 336 aaKnown RBP13.28□□□□□ -0.28
RBFOX1-224ENST00000641259 SH2D3CQ8N5H7 860 aa13.28□□□□□ -0.28
RBFOX1-224ENST00000641259 RASSF8Q8NHQ8 419 aa13.28□□□□□ -0.28
RBFOX1-224ENST00000641259 ANKRD2Q9GZV1 360 aa13.28□□□□□ -0.28
RBFOX1-224ENST00000641259 MRPL44Q9H9J2 332 aaKnown RBP13.28□□□□□ -0.28
RBFOX1-224ENST00000641259 PNPLA7Q6ZV29 1317 aa13.28□□□□□ -0.28
RBFOX1-224ENST00000641259 E7EVH7 732 aa13.27□□□□□ -0.28
RBFOX1-224ENST00000641259 PPP1R12AO14974 1030 aaPredicted RBP13.27□□□□□ -0.28
RBFOX1-224ENST00000641259 RPGRQ92834 1020 aaKnown RBP13.27□□□□□ -0.28
RBFOX1-224ENST00000641259 RIOK1Q9BRS2 568 aaKnown RBP13.27□□□□□ -0.28
RBFOX1-224ENST00000641259 CLIC4Q9Y696 253 aa13.27□□□□□ -0.28
RBFOX1-224ENST00000641259 PRC1O43663 620 aa13.27□□□□□ -0.29
RBFOX1-224ENST00000641259 HDAC6Q9UBN7 1215 aa13.27□□□□□ -0.29
RBFOX1-224ENST00000641259 SLC4A4Q9Y6R1 1079 aa13.27□□□□□ -0.29
RBFOX1-224ENST00000641259 BAZ2AQ9UIF9 1905 aaKnown RBP13.27□□□□□ -0.29
RBFOX1-224ENST00000641259 TUBB4AP04350 444 aa13.27□□□□□ -0.29
RBFOX1-224ENST00000641259 PDIA3P30101 505 aaKnown RBP13.27□□□□□ -0.29
RBFOX1-224ENST00000641259 AFMP43652 599 aa13.27□□□□□ -0.29
RBFOX1-224ENST00000641259 MAP3K9P80192 1104 aa13.27□□□□□ -0.29
RBFOX1-224ENST00000641259 SF3B2Q13435 895 aaKnown RBP13.27□□□□□ -0.29
RBFOX1-224ENST00000641259 RSRC1Q96IZ7 334 aaKnown RBP13.27□□□□□ -0.29
RBFOX1-224ENST00000641259 NAPGQ99747 312 aaPredicted RBP13.27□□□□□ -0.29
RBFOX1-224ENST00000641259 LRRC37AA6NMS7 1700 aa13.27□□□□□ -0.29
RBFOX1-224ENST00000641259 MECOMQ03112 1051 aa13.26□□□□□ -0.29
RBFOX1-224ENST00000641259 FILIP1LQ4L180 1135 aa13.26□□□□□ -0.29
RBFOX1-224ENST00000641259 MICALCLQ6ZW33 695 aa13.26□□□□□ -0.29
RBFOX1-224ENST00000641259 PSD3Q9NYI0 1048 aa13.26□□□□□ -0.29
RBFOX1-224ENST00000641259 MACROD2A1Z1Q3 448 aa13.26□□□□□ -0.29
RBFOX1-224ENST00000641259 B4E1Z4 1266 aa13.26□□□□□ -0.29
RBFOX1-224ENST00000641259 PFKFB2O60825 505 aa13.26□□□□□ -0.29
RBFOX1-224ENST00000641259 TAX1BP1Q86VP1 789 aa13.26□□□□□ -0.29
RBFOX1-224ENST00000641259 NSUN4Q96CB9 384 aaKnown RBP13.26□□□□□ -0.29
RBFOX1-224ENST00000641259 IRF6O14896 467 aa13.26□□□□□ -0.29
RBFOX1-224ENST00000641259 CHUKO15111 745 aa13.26□□□□□ -0.29
RBFOX1-224ENST00000641259 EEF2KMTQ96G04 330 aa13.26□□□□□ -0.29
RBFOX1-224ENST00000641259 HPS5Q9UPZ3 1129 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms