RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 THSD7BQ9C0I4 1608 aa10.6□□□□□ -0.71
SCARB2-225ENST00000640900 USP17L15C9J2P7 530 aa10.6□□□□□ -0.71
SCARB2-225ENST00000640900 USP17L13C9JLJ4 530 aa10.6□□□□□ -0.71
SCARB2-225ENST00000640900 USP17L11C9JVI0 530 aa10.6□□□□□ -0.71
SCARB2-225ENST00000640900 USP17L18D6R9N7 530 aa10.6□□□□□ -0.71
SCARB2-225ENST00000640900 USP17L22D6RA61 530 aa10.6□□□□□ -0.71
SCARB2-225ENST00000640900 USP17L17D6RBQ6 530 aa10.6□□□□□ -0.71
SCARB2-225ENST00000640900 USP17L19D6RCP7 530 aa10.6□□□□□ -0.71
SCARB2-225ENST00000640900 USP17L20D6RJB6 530 aa10.6□□□□□ -0.71
SCARB2-225ENST00000640900 PRPF3O43395 683 aaKnown RBP10.6□□□□□ -0.71
SCARB2-225ENST00000640900 DHX16O60231 1041 aaKnown RBP10.6□□□□□ -0.71
SCARB2-225ENST00000640900 FMNL1O95466 1100 aaPredicted RBP10.6□□□□□ -0.71
SCARB2-225ENST00000640900 GOLGA8HP0CJ92 632 aa10.6□□□□□ -0.71
SCARB2-225ENST00000640900 DDIT3P35638 169 aa10.6□□□□□ -0.71
SCARB2-225ENST00000640900 TM4SF4P48230 202 aa10.6□□□□□ -0.71
SCARB2-225ENST00000640900 CCT2P78371 535 aaKnown RBP10.6□□□□□ -0.71
SCARB2-225ENST00000640900 USP17L24Q0WX57 530 aa10.6□□□□□ -0.71
SCARB2-225ENST00000640900 STK3Q13188 491 aa10.6□□□□□ -0.71
SCARB2-225ENST00000640900 PKN1Q16512 942 aa10.6□□□□□ -0.71
SCARB2-225ENST00000640900 NOL8Q76FK4 1167 aaKnown RBP10.6□□□□□ -0.71
SCARB2-225ENST00000640900 ANKRD23Q86SG2 305 aa10.6□□□□□ -0.71
SCARB2-225ENST00000640900 FAM160B2Q86V87 743 aa10.6□□□□□ -0.71
SCARB2-225ENST00000640900 RAB11FIP4Q86YS3 637 aa10.6□□□□□ -0.71
SCARB2-225ENST00000640900 CCDC83Q8IWF9 413 aa10.6□□□□□ -0.71
SCARB2-225ENST00000640900 RGS22Q8NE09 1264 aa10.6□□□□□ -0.71
SCARB2-225ENST00000640900 REPS2Q8NFH8 660 aa10.6□□□□□ -0.71
SCARB2-225ENST00000640900 CHURC1Q8WUH1 139 aa10.6□□□□□ -0.71
SCARB2-225ENST00000640900 RNF26Q9BY78 433 aaPredicted RBP10.6□□□□□ -0.71
SCARB2-225ENST00000640900 RPAP3Q9H6T3 665 aaPredicted RBP10.6□□□□□ -0.71
SCARB2-225ENST00000640900 JMJD4Q9H9V9 463 aa10.6□□□□□ -0.71
SCARB2-225ENST00000640900 PPP1R9AQ9ULJ8 1098 aa10.6□□□□□ -0.71
SCARB2-225ENST00000640900 BAZ2BQ9UIF8 2168 aaKnown RBP10.6□□□□□ -0.71
SCARB2-225ENST00000640900 A0A0G2JMZ2 1700 aa10.59□□□□□ -0.71
SCARB2-225ENST00000640900 MANSC4A6NHS7 340 aaPredicted RBP10.59□□□□□ -0.71
SCARB2-225ENST00000640900 BTBD19C9JJ37 291 aa10.59□□□□□ -0.71
SCARB2-225ENST00000640900 TMEM232C9JQI7 657 aa10.59□□□□□ -0.71
SCARB2-225ENST00000640900 FDX1P10109 184 aa10.59□□□□□ -0.71
SCARB2-225ENST00000640900 ANP32AP39687 249 aaKnown RBP10.59□□□□□ -0.71
SCARB2-225ENST00000640900 INHBEP58166 350 aa10.59□□□□□ -0.71
SCARB2-225ENST00000640900 BECN1Q14457 450 aa10.59□□□□□ -0.71
SCARB2-225ENST00000640900 ZYXQ15942 572 aaKnown RBP10.59□□□□□ -0.71
SCARB2-225ENST00000640900 SYDE2Q5VT97 1194 aa10.59□□□□□ -0.71
SCARB2-225ENST00000640900 CCDC144CPQ8IYA2 1237 aa10.59□□□□□ -0.71
SCARB2-225ENST00000640900 ADGRF4Q8IZF3 695 aa10.59□□□□□ -0.71
SCARB2-225ENST00000640900 PRPF38AQ8NAV1 312 aaKnown RBP10.59□□□□□ -0.71
SCARB2-225ENST00000640900 RANBP17Q9H2T7 1088 aaKnown RBP10.59□□□□□ -0.71
SCARB2-225ENST00000640900 GPCPD1Q9NPB8 672 aa10.59□□□□□ -0.71
SCARB2-225ENST00000640900 FBXO28Q9NVF7 368 aa10.59□□□□□ -0.71
SCARB2-225ENST00000640900 TMOD4Q9NZQ9 345 aa10.59□□□□□ -0.71
SCARB2-225ENST00000640900 PRR12Q9ULL5 1215 aa10.59□□□□□ -0.71
SCARB2-225ENST00000640900 ABT1Q9ULW3 272 aaKnown RBP10.59□□□□□ -0.71
SCARB2-225ENST00000640900 CEP350Q5VT06 3117 aa10.59□□□□□ -0.71
SCARB2-225ENST00000640900 FRMPD2Q68DX3 1309 aaPredicted RBP10.58□□□□□ -0.71
SCARB2-225ENST00000640900 ADGRA2Q96PE1 1338 aa10.58□□□□□ -0.71
SCARB2-225ENST00000640900 CCL15-CCL14A0A0B4J2E2 113 aa10.58□□□□□ -0.72
SCARB2-225ENST00000640900 SPDYE16A6NNV3 312 aaPredicted RBP10.58□□□□□ -0.72
SCARB2-225ENST00000640900 ATP2A1O14983 1001 aa10.58□□□□□ -0.72
SCARB2-225ENST00000640900 JAK2O60674 1132 aa10.58□□□□□ -0.72
SCARB2-225ENST00000640900 CDKL5O76039 1030 aa10.58□□□□□ -0.72
SCARB2-225ENST00000640900 SLC16A2P36021 539 aa10.58□□□□□ -0.72
SCARB2-225ENST00000640900 STAT2P52630 851 aa10.58□□□□□ -0.72
SCARB2-225ENST00000640900 NOGQ13253 232 aa10.58□□□□□ -0.72
SCARB2-225ENST00000640900 COG2Q14746 738 aa10.58□□□□□ -0.72
SCARB2-225ENST00000640900 CCL15Q16663 113 aa10.58□□□□□ -0.72
SCARB2-225ENST00000640900 CCDC96Q2M329 555 aa10.58□□□□□ -0.72
SCARB2-225ENST00000640900 DEFB115Q30KQ5 88 aa10.58□□□□□ -0.72
SCARB2-225ENST00000640900 FAM177A1Q8N128 213 aaPredicted RBP10.58□□□□□ -0.72
SCARB2-225ENST00000640900 CMTR1Q8N1G2 835 aaKnown RBP10.58□□□□□ -0.72
SCARB2-225ENST00000640900 SPOCK2Q92563 424 aa10.58□□□□□ -0.72
SCARB2-225ENST00000640900 SHISA4Q96DD7 197 aa10.58□□□□□ -0.72
SCARB2-225ENST00000640900 ZIC5Q96T25 663 aa10.58□□□□□ -0.72
SCARB2-225ENST00000640900 SLF1Q9BQI6 1058 aa10.58□□□□□ -0.72
SCARB2-225ENST00000640900 UBA5Q9GZZ9 404 aa10.58□□□□□ -0.72
SCARB2-225ENST00000640900 CPVLQ9H3G5 476 aa10.58□□□□□ -0.72
SCARB2-225ENST00000640900 SLC38A10Q9HBR0 1119 aa10.58□□□□□ -0.72
SCARB2-225ENST00000640900 HOXC10Q9NYD6 342 aa10.58□□□□□ -0.72
SCARB2-225ENST00000640900 RBM27Q9P2N5 1060 aaKnown RBP10.58□□□□□ -0.72
SCARB2-225ENST00000640900 PCNTO95613 3336 aa10.58□□□□□ -0.72
SCARB2-225ENST00000640900 ZNF536O15090 1300 aa10.58□□□□□ -0.72
SCARB2-225ENST00000640900 PNMA6FA0A0J9YX94 578 aa10.57□□□□□ -0.72
SCARB2-225ENST00000640900 PTPDC1A2A3K4 754 aa10.57□□□□□ -0.72
SCARB2-225ENST00000640900 HAX1O00165 279 aa10.57□□□□□ -0.72
SCARB2-225ENST00000640900 IGF2BP3O00425 579 aaKnown RBP eCLIP10.57□□□□□ -0.72
SCARB2-225ENST00000640900 VWA5AO00534 786 aa10.57□□□□□ -0.72
SCARB2-225ENST00000640900 PPP1R11O60927 126 aaPredicted RBP10.57□□□□□ -0.72
SCARB2-225ENST00000640900 C1QTNF8P60827 252 aa10.57□□□□□ -0.72
SCARB2-225ENST00000640900 HMGN5P82970 282 aaKnown RBP10.57□□□□□ -0.72
SCARB2-225ENST00000640900 PFKFB3Q16875 520 aaPredicted RBP10.57□□□□□ -0.72
SCARB2-225ENST00000640900 CYP4F22Q6NT55 531 aa10.57□□□□□ -0.72
SCARB2-225ENST00000640900 CPLX2Q6PUV4 134 aaKnown RBP10.57□□□□□ -0.72
SCARB2-225ENST00000640900 IFNL1Q8IU54 200 aa10.57□□□□□ -0.72
SCARB2-225ENST00000640900 FAM43AQ8N2R8 423 aa10.57□□□□□ -0.72
SCARB2-225ENST00000640900 PHKBQ93100 1093 aa10.57□□□□□ -0.72
SCARB2-225ENST00000640900 CAPNS2Q96L46 248 aa10.57□□□□□ -0.72
SCARB2-225ENST00000640900 P2RX7Q99572 595 aaKnown RBP10.57□□□□□ -0.72
SCARB2-225ENST00000640900 ASCC2Q9H1I8 757 aaPredicted RBP10.57□□□□□ -0.72
SCARB2-225ENST00000640900 NAP1L2Q9ULW6 460 aaPredicted RBP10.57□□□□□ -0.72
SCARB2-225ENST00000640900 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.57□□□□□ -0.72
SCARB2-225ENST00000640900 V9GY48 417 aaPredicted RBP10.57□□□□□ -0.72
SCARB2-225ENST00000640900 CPLX1O14810 134 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms