RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 NSMCE1Q8WV22 266 aa6.3□□□□□ -1.4
SCARB2-218ENST00000639715 CTNNBL1Q8WYA6 563 aaPredicted RBP6.3□□□□□ -1.4
SCARB2-218ENST00000639715 NLRP3Q96P20 1036 aa6.3□□□□□ -1.4
SCARB2-218ENST00000639715 DENND2AQ9ULE3 1009 aa6.3□□□□□ -1.4
SCARB2-218ENST00000639715 COL24A1Q17RW2 1714 aa6.3□□□□□ -1.4
SCARB2-218ENST00000639715 MAST3O60307 1309 aa6.3□□□□□ -1.4
SCARB2-218ENST00000639715 SALL3Q9BXA9 1300 aa6.3□□□□□ -1.4
SCARB2-218ENST00000639715 OATP04181 439 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 GNAT1P11488 350 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 PFKFB1P16118 471 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 RXRAP19793 462 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 MTIF2P46199 727 aaKnown RBP6.29□□□□□ -1.4
SCARB2-218ENST00000639715 PDCLQ13371 301 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 SLMAPQ14BN4 828 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 SLC39A14Q15043 492 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 CCDC38Q502W7 563 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 LRRC24Q50LG9 513 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 ZNF365Q70YC5 407 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 SPATA5Q8NB90 893 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 FERMT2Q96AC1 680 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 CCDC43Q96MW1 224 aaKnown RBP6.29□□□□□ -1.4
SCARB2-218ENST00000639715 ACTR5Q9H9F9 607 aaPredicted RBP6.29□□□□□ -1.4
SCARB2-218ENST00000639715 SLC40A1Q9NP59 571 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 ANKIB1Q9P2G1 1089 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 TCEAL9Q9UHQ7 104 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 CDC23Q9UJX2 597 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 RGPD1P0DJD0 1748 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 UBR1Q8IWV7 1749 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 HEG1Q9ULI3 1381 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 AKR1B15C9JRZ8 316 aaPredicted RBP6.29□□□□□ -1.4
SCARB2-218ENST00000639715 ZNF189O75820 626 aaPredicted RBP6.29□□□□□ -1.4
SCARB2-218ENST00000639715 HPDP32754 393 aaPredicted RBP6.29□□□□□ -1.4
SCARB2-218ENST00000639715 CYLC1P35663 651 aaPredicted RBP6.29□□□□□ -1.4
SCARB2-218ENST00000639715 PPP1R2P41236 205 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 PAFAH1B1P43034 410 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 SMTNP53814 917 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 IKQ13123 557 aaPredicted RBP6.29□□□□□ -1.4
SCARB2-218ENST00000639715 SARM1Q6SZW1 724 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 CCDC170Q8IYT3 715 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 TRIML1Q8N9V2 468 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 HOOK2Q96ED9 719 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 CAPZA3Q96KX2 299 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 NYXQ9GZU5 481 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 ANKRD2Q9GZV1 360 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 CABP5Q9NP86 173 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 CARMIL3Q8ND23 1372 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 IKBKBO14920 756 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 PPP6R2O75170 966 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 MYBL1P10243 752 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 PDHBP11177 359 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 PDE6AP16499 860 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 CTSWP56202 376 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 CKAP4Q07065 602 aaKnown RBP6.29□□□□□ -1.4
SCARB2-218ENST00000639715 SF3A3Q12874 501 aaKnown RBP eCLIP6.29□□□□□ -1.4
SCARB2-218ENST00000639715 TRIM14Q14142 442 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 C11orf57Q6ZUT1 292 aaPredicted RBP6.29□□□□□ -1.4
SCARB2-218ENST00000639715 SPATA21Q7Z572 469 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 ARFGAP2Q8N6H7 521 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 TRIM47Q96LD4 638 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 DESI2Q9BSY9 194 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 NOP53Q9NZM5 478 aaKnown RBP6.29□□□□□ -1.4
SCARB2-218ENST00000639715 RPS6KL1Q9Y6S9 549 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 A0A087WWV3 80 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 CETN3O15182 167 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 KRT83P78385 493 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 DDB1Q16531 1140 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 RASIP1Q5U651 963 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 KCTD16Q68DU8 428 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 KCNV1Q6PIU1 500 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 GIGYF2Q6Y7W6 1299 aaKnown RBP6.29□□□□□ -1.4
SCARB2-218ENST00000639715 CACNA2D4Q7Z3S7 1137 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 HOOK3Q86VS8 718 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 ANKS4BQ8N8V4 417 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 LINC00301Q8NCQ3 95 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 FAM81AQ8TBF8 368 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 RIN2Q8WYP3 895 aaPredicted RBP6.29□□□□□ -1.4
SCARB2-218ENST00000639715 TAF4BQ92750 862 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 ABTB1Q969K4 478 aaPredicted RBP6.29□□□□□ -1.4
SCARB2-218ENST00000639715 IL17RAQ96F46 866 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 ATP6V0A4Q9HBG4 840 aa6.29□□□□□ -1.4
SCARB2-218ENST00000639715 RREB1Q92766 1687 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 MAP3K15Q6ZN16 1313 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 ANKRD26Q9UPS8 1709 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 NUTM2BA6NNL0 878 aaPredicted RBP6.28□□□□□ -1.4
SCARB2-218ENST00000639715 NUTM2EB1AL46 878 aaPredicted RBP6.28□□□□□ -1.4
SCARB2-218ENST00000639715 POLR2DO15514 142 aaKnown RBP6.28□□□□□ -1.4
SCARB2-218ENST00000639715 FERP16591 822 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 MRPL12P52815 198 aaKnown RBP6.28□□□□□ -1.4
SCARB2-218ENST00000639715 LACTBP83111 547 aaPredicted RBP6.28□□□□□ -1.4
SCARB2-218ENST00000639715 DDR1Q08345 913 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 POSTNQ15063 836 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 DIXDC1Q155Q3 683 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 RABL6Q3YEC7 729 aaPredicted RBP6.28□□□□□ -1.4
SCARB2-218ENST00000639715 BEND6Q5SZJ8 279 aaPredicted RBP6.28□□□□□ -1.4
SCARB2-218ENST00000639715 CFAP58Q5T655 872 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 NOSTRINQ8IVI9 506 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 MIGA1Q8NAN2 632 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 KCNB2Q92953 911 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 MTRQ99707 1265 aa6.28□□□□□ -1.4
SCARB2-218ENST00000639715 NAA15Q9BXJ9 866 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms