RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 SLF1Q9BQI6 1058 aa22.65■■□□□ 1.22
SYNGAP1-227ENST00000638142 GDAQ9Y2T3 454 aa22.65■■□□□ 1.22
SYNGAP1-227ENST00000638142 A0A1W2PQC6 194 aa22.64■■□□□ 1.21
SYNGAP1-227ENST00000638142 AMPD2Q01433 879 aa22.64■■□□□ 1.21
SYNGAP1-227ENST00000638142 SEMA3FQ13275 785 aa22.64■■□□□ 1.21
SYNGAP1-227ENST00000638142 BLIDQ8IZY5 108 aa22.64■■□□□ 1.21
SYNGAP1-227ENST00000638142 ADSSL1Q8N142 457 aa22.64■■□□□ 1.21
SYNGAP1-227ENST00000638142 DISC1Q9NRI5 854 aa22.64■■□□□ 1.21
SYNGAP1-227ENST00000638142 ARPP21Q9UBL0 812 aaPredicted RBP22.64■■□□□ 1.21
SYNGAP1-227ENST00000638142 ADAM21Q9UKJ8 722 aa22.64■■□□□ 1.21
SYNGAP1-227ENST00000638142 MYO6Q9UM54 1294 aa22.64■■□□□ 1.21
SYNGAP1-227ENST00000638142 EPN1Q9Y6I3 576 aaPredicted RBP22.64■■□□□ 1.21
SYNGAP1-227ENST00000638142 PDS5AQ29RF7 1337 aaKnown RBP22.64■■□□□ 1.21
SYNGAP1-227ENST00000638142 NDUFA10O95299 355 aa22.64■■□□□ 1.21
SYNGAP1-227ENST00000638142 PARP1P09874 1014 aaKnown RBP22.64■■□□□ 1.21
SYNGAP1-227ENST00000638142 RAD51AP2Q09MP3 1159 aa22.64■■□□□ 1.21
SYNGAP1-227ENST00000638142 FAM47AQ5JRC9 791 aa22.64■■□□□ 1.21
SYNGAP1-227ENST00000638142 MINPP1Q9UNW1 487 aa22.64■■□□□ 1.21
SYNGAP1-227ENST00000638142 WTIPA6NIX2 430 aaPredicted RBP22.63■■□□□ 1.21
SYNGAP1-227ENST00000638142 LGALS16A8MUM7 142 aa22.63■■□□□ 1.21
SYNGAP1-227ENST00000638142 MYL1P05976 194 aa22.63■■□□□ 1.21
SYNGAP1-227ENST00000638142 EEF1GP26641 437 aaKnown RBP22.63■■□□□ 1.21
SYNGAP1-227ENST00000638142 KCNB1Q14721 858 aa22.63■■□□□ 1.21
SYNGAP1-227ENST00000638142 SBK1Q52WX2 424 aa22.63■■□□□ 1.21
SYNGAP1-227ENST00000638142 IRF2BP1Q8IU81 584 aa22.63■■□□□ 1.21
SYNGAP1-227ENST00000638142 OR8K1Q8NGG5 319 aa22.63■■□□□ 1.21
SYNGAP1-227ENST00000638142 ABCB6Q9NP58 842 aa22.63■■□□□ 1.21
SYNGAP1-227ENST00000638142 MECOMQ03112 1051 aa22.63■■□□□ 1.21
SYNGAP1-227ENST00000638142 ITPK1Q13572 414 aa22.63■■□□□ 1.21
SYNGAP1-227ENST00000638142 MCM6Q14566 821 aa22.63■■□□□ 1.21
SYNGAP1-227ENST00000638142 FBXO33Q7Z6M2 555 aa22.63■■□□□ 1.21
SYNGAP1-227ENST00000638142 VEGFAP15692 232 aaPredicted RBP22.62■■□□□ 1.21
SYNGAP1-227ENST00000638142 MB21D1Q8N884 522 aa22.62■■□□□ 1.21
SYNGAP1-227ENST00000638142 DNAJC7Q99615 494 aa22.62■■□□□ 1.21
SYNGAP1-227ENST00000638142 HAUS4Q9H6D7 363 aa22.62■■□□□ 1.21
SYNGAP1-227ENST00000638142 PDE11AQ9HCR9 933 aa22.62■■□□□ 1.21
SYNGAP1-227ENST00000638142 PCDHA4Q9UN74 947 aa22.62■■□□□ 1.21
SYNGAP1-227ENST00000638142 ZNF335Q9H4Z2 1342 aaPredicted RBP22.62■■□□□ 1.21
SYNGAP1-227ENST00000638142 MYH14Q7Z406 1995 aaKnown RBP22.62■■□□□ 1.21
SYNGAP1-227ENST00000638142 TSPY2A6NKD2 308 aa22.62■■□□□ 1.21
SYNGAP1-227ENST00000638142 RHOXF2BP0C7M4 288 aa22.62■■□□□ 1.21
SYNGAP1-227ENST00000638142 CLEC4GQ6UXB4 293 aa22.62■■□□□ 1.21
SYNGAP1-227ENST00000638142 CHP1Q99653 195 aa22.62■■□□□ 1.21
SYNGAP1-227ENST00000638142 RHOXF2Q9BQY4 288 aa22.62■■□□□ 1.21
SYNGAP1-227ENST00000638142 THAP9Q9H5L6 903 aa22.62■■□□□ 1.21
SYNGAP1-227ENST00000638142 MAPK8IP1Q9UQF2 711 aa22.62■■□□□ 1.21
SYNGAP1-227ENST00000638142 LUC7L2Q9Y383 392 aaKnown RBP22.62■■□□□ 1.21
SYNGAP1-227ENST00000638142 TTC26A0AVF1 554 aa22.61■■□□□ 1.21
SYNGAP1-227ENST00000638142 ADAMTS3O15072 1205 aa22.61■■□□□ 1.21
SYNGAP1-227ENST00000638142 NT5C2P49902 561 aa22.61■■□□□ 1.21
SYNGAP1-227ENST00000638142 VSNL1P62760 191 aa22.61■■□□□ 1.21
SYNGAP1-227ENST00000638142 EVX2Q03828 476 aa22.61■■□□□ 1.21
SYNGAP1-227ENST00000638142 STIM1Q13586 685 aa22.61■■□□□ 1.21
SYNGAP1-227ENST00000638142 RCSD1Q6JBY9 416 aa22.61■■□□□ 1.21
SYNGAP1-227ENST00000638142 CDCA7Q9BWT1 371 aaPredicted RBP22.61■■□□□ 1.21
SYNGAP1-227ENST00000638142 REXO2Q9Y3B8 237 aaKnown RBP22.61■■□□□ 1.21
SYNGAP1-227ENST00000638142 BAZ2BQ9UIF8 2168 aaKnown RBP22.61■■□□□ 1.21
SYNGAP1-227ENST00000638142 PSMD14O00487 310 aa22.6■■□□□ 1.21
SYNGAP1-227ENST00000638142 ADAMTS2O95450 1211 aa22.6■■□□□ 1.21
SYNGAP1-227ENST00000638142 ZSCAN26Q16670 478 aa22.6■■□□□ 1.21
SYNGAP1-227ENST00000638142 ERFEQ4G0M1 354 aa22.6■■□□□ 1.21
SYNGAP1-227ENST00000638142 DTHD1Q6ZMT9 781 aa22.6■■□□□ 1.21
SYNGAP1-227ENST00000638142 TFRCP02786 760 aaKnown RBP22.6■■□□□ 1.21
SYNGAP1-227ENST00000638142 NAALADL2Q58DX5 795 aa22.6■■□□□ 1.21
SYNGAP1-227ENST00000638142 WDR93Q6P2C0 686 aa22.6■■□□□ 1.21
SYNGAP1-227ENST00000638142 C3orf67Q6ZVT6 689 aa22.6■■□□□ 1.21
SYNGAP1-227ENST00000638142 CCDC148Q8NFR7 591 aa22.6■■□□□ 1.21
SYNGAP1-227ENST00000638142 ZNF507Q8TCN5 953 aa22.6■■□□□ 1.21
SYNGAP1-227ENST00000638142 KAT14Q9H8E8 782 aa22.6■■□□□ 1.21
SYNGAP1-227ENST00000638142 CAPN11Q9UMQ6 739 aa22.6■■□□□ 1.21
SYNGAP1-227ENST00000638142 FAM205AQ6ZU69 1335 aa22.6■■□□□ 1.21
SYNGAP1-227ENST00000638142 TSR1Q2NL82 804 aaKnown RBP22.59■■□□□ 1.21
SYNGAP1-227ENST00000638142 KIAA1551Q9HCM1 1747 aa22.59■■□□□ 1.21
SYNGAP1-227ENST00000638142 TRIM49BA6NDI0 452 aa22.59■■□□□ 1.21
SYNGAP1-227ENST00000638142 PSMA7O14818 248 aa22.59■■□□□ 1.21
SYNGAP1-227ENST00000638142 ZNF662Q6ZS27 426 aa22.59■■□□□ 1.21
SYNGAP1-227ENST00000638142 TRAPPC11Q7Z392 1133 aa22.59■■□□□ 1.21
SYNGAP1-227ENST00000638142 GOLGA5Q8TBA6 731 aa22.59■■□□□ 1.21
SYNGAP1-227ENST00000638142 NOC3LQ8WTT2 800 aaKnown RBP22.59■■□□□ 1.21
SYNGAP1-227ENST00000638142 GUCA1BQ9UMX6 200 aa22.59■■□□□ 1.21
SYNGAP1-227ENST00000638142 A0A0G2JS52 829 aa22.58■■□□□ 1.21
SYNGAP1-227ENST00000638142 RHOBTB3O94955 611 aa22.58■■□□□ 1.21
SYNGAP1-227ENST00000638142 DGKHQ86XP1 1220 aa22.58■■□□□ 1.21
SYNGAP1-227ENST00000638142 CWC15Q9P013 229 aaKnown RBP22.58■■□□□ 1.21
SYNGAP1-227ENST00000638142 CCDC194A0A1B0GVG4 234 aa22.58■■□□□ 1.21
SYNGAP1-227ENST00000638142 M0R2N6 131 aa22.58■■□□□ 1.21
SYNGAP1-227ENST00000638142 CYP2D6P10635 497 aa22.58■■□□□ 1.21
SYNGAP1-227ENST00000638142 GYS2P54840 703 aa22.58■■□□□ 1.21
SYNGAP1-227ENST00000638142 CASP8Q14790 479 aa22.58■■□□□ 1.21
SYNGAP1-227ENST00000638142 NOA1Q8NC60 698 aaKnown RBP22.58■■□□□ 1.21
SYNGAP1-227ENST00000638142 CCSER1Q9C0I3 900 aa22.58■■□□□ 1.21
SYNGAP1-227ENST00000638142 MAGEC2Q9UBF1 373 aaPredicted RBP22.58■■□□□ 1.21
SYNGAP1-227ENST00000638142 FEZ2Q9UHY8 353 aaPredicted RBP22.58■■□□□ 1.21
SYNGAP1-227ENST00000638142 KLRC4O43908 158 aa22.57■■□□□ 1.2
SYNGAP1-227ENST00000638142 DNM2P50570 870 aa22.57■■□□□ 1.2
SYNGAP1-227ENST00000638142 GALNT17Q6IS24 598 aa22.57■■□□□ 1.2
SYNGAP1-227ENST00000638142 DAGLBQ8NCG7 672 aa22.57■■□□□ 1.2
SYNGAP1-227ENST00000638142 GIMAP8Q8ND71 665 aaPredicted RBP22.57■■□□□ 1.2
SYNGAP1-227ENST00000638142 EHBP1Q8NDI1 1231 aa22.57■■□□□ 1.2
SYNGAP1-227ENST00000638142 RASSF8Q8NHQ8 419 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms