RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 KANSL2Q9H9L4 492 aa7.9□□□□□ -1.14
UPF3B-205ENST00000636792 ARHGEF10LQ9HCE6 1279 aa7.9□□□□□ -1.14
UPF3B-205ENST00000636792 NYAP2Q9P242 653 aa7.9□□□□□ -1.14
UPF3B-205ENST00000636792 ZBTB21Q9ULJ3 1066 aa7.9□□□□□ -1.14
UPF3B-205ENST00000636792 SNX14Q9Y5W7 946 aa7.9□□□□□ -1.14
UPF3B-205ENST00000636792 PARP14Q460N5 1801 aa7.89□□□□□ -1.15
UPF3B-205ENST00000636792 NID2Q14112 1375 aa7.89□□□□□ -1.15
UPF3B-205ENST00000636792 IGKV6D-41A0A0C4DH26 115 aa7.89□□□□□ -1.15
UPF3B-205ENST00000636792 TMEM88BA6NKF7 163 aa7.89□□□□□ -1.15
UPF3B-205ENST00000636792 USP17L5A8MUK1 530 aa7.89□□□□□ -1.15
UPF3B-205ENST00000636792 USP2O75604 605 aaPredicted RBP7.89□□□□□ -1.15
UPF3B-205ENST00000636792 CELF2O95319 508 aaKnown RBP7.89□□□□□ -1.15
UPF3B-205ENST00000636792 TTLL1O95922 423 aa7.89□□□□□ -1.15
UPF3B-205ENST00000636792 CYP2D6P10635 497 aa7.89□□□□□ -1.15
UPF3B-205ENST00000636792 LIFRP42702 1097 aa7.89□□□□□ -1.15
UPF3B-205ENST00000636792 MCM2P49736 904 aa7.89□□□□□ -1.15
UPF3B-205ENST00000636792 MMP16P51512 607 aa7.89□□□□□ -1.15
UPF3B-205ENST00000636792 USP14P54578 494 aa7.89□□□□□ -1.15
UPF3B-205ENST00000636792 HAND2P61296 217 aa7.89□□□□□ -1.15
UPF3B-205ENST00000636792 CTDSPL2Q05D32 466 aa7.89□□□□□ -1.15
UPF3B-205ENST00000636792 PPATQ06203 517 aa7.89□□□□□ -1.15
UPF3B-205ENST00000636792 PPP2R5BQ15173 497 aa7.89□□□□□ -1.15
UPF3B-205ENST00000636792 RCSD1Q6JBY9 416 aa7.89□□□□□ -1.15
UPF3B-205ENST00000636792 DHX32Q7L7V1 743 aaKnown RBP7.89□□□□□ -1.15
UPF3B-205ENST00000636792 SGMS1Q86VZ5 419 aa7.89□□□□□ -1.15
UPF3B-205ENST00000636792 ERO1BQ86YB8 467 aa7.89□□□□□ -1.15
UPF3B-205ENST00000636792 ANKS1AQ92625 1134 aa7.89□□□□□ -1.15
UPF3B-205ENST00000636792 MAP3K14Q99558 947 aa7.89□□□□□ -1.15
UPF3B-205ENST00000636792 WDR18Q9BV38 432 aa7.89□□□□□ -1.15
UPF3B-205ENST00000636792 PICK1Q9NRD5 415 aa7.89□□□□□ -1.15
UPF3B-205ENST00000636792 ANGEL1Q9UNK9 670 aaKnown RBP7.89□□□□□ -1.15
UPF3B-205ENST00000636792 CYP46A1Q9Y6A2 500 aa7.89□□□□□ -1.15
UPF3B-205ENST00000636792 TLL2Q9Y6L7 1015 aa7.89□□□□□ -1.15
UPF3B-205ENST00000636792 TNKSO95271 1327 aa7.88□□□□□ -1.15
UPF3B-205ENST00000636792 CYP2D7A0A087X1C5 515 aa7.88□□□□□ -1.15
UPF3B-205ENST00000636792 C19orf81C9J6K1 198 aa7.88□□□□□ -1.15
UPF3B-205ENST00000636792 CXCL11O14625 94 aa7.88□□□□□ -1.15
UPF3B-205ENST00000636792 RANBP6O60518 1105 aaKnown RBP7.88□□□□□ -1.15
UPF3B-205ENST00000636792 KDM4AO75164 1064 aa7.88□□□□□ -1.15
UPF3B-205ENST00000636792 CALM1P0DP23 149 aa7.88□□□□□ -1.15
UPF3B-205ENST00000636792 CALM2P0DP24 149 aa7.88□□□□□ -1.15
UPF3B-205ENST00000636792 CALM3P0DP25 149 aa7.88□□□□□ -1.15
UPF3B-205ENST00000636792 CASTP20810 708 aaKnown RBP7.88□□□□□ -1.15
UPF3B-205ENST00000636792 RPS6KB1P23443 525 aa7.88□□□□□ -1.15
UPF3B-205ENST00000636792 ICA1Q05084 483 aa7.88□□□□□ -1.15
UPF3B-205ENST00000636792 PPIL2Q13356 520 aa7.88□□□□□ -1.15
UPF3B-205ENST00000636792 VGLL4Q14135 290 aa7.88□□□□□ -1.15
UPF3B-205ENST00000636792 SMYD5Q6GMV2 418 aa7.88□□□□□ -1.15
UPF3B-205ENST00000636792 STOX1Q6ZVD7 989 aa7.88□□□□□ -1.15
UPF3B-205ENST00000636792 RUFY3Q7L099 469 aa7.88□□□□□ -1.15
UPF3B-205ENST00000636792 SAPCD2Q86UD0 394 aa7.88□□□□□ -1.15
UPF3B-205ENST00000636792 SLC44A5Q8NCS7 719 aa7.88□□□□□ -1.15
UPF3B-205ENST00000636792 GMCL1P1Q8NEA9 526 aa7.88□□□□□ -1.15
UPF3B-205ENST00000636792 LPAR1Q92633 364 aa7.88□□□□□ -1.15
UPF3B-205ENST00000636792 MKL1Q969V6 931 aa7.88□□□□□ -1.15
UPF3B-205ENST00000636792 DYNLL2Q96FJ2 89 aa7.88□□□□□ -1.15
UPF3B-205ENST00000636792 C12orf42Q96LP6 360 aa7.88□□□□□ -1.15
UPF3B-205ENST00000636792 JAKMIP1Q96N16 626 aaKnown RBP7.88□□□□□ -1.15
UPF3B-205ENST00000636792 ZSCAN10Q96SZ4 725 aaPredicted RBP7.88□□□□□ -1.15
UPF3B-205ENST00000636792 KIAA1683Q9H0B3 1180 aa7.88□□□□□ -1.15
UPF3B-205ENST00000636792 ZCCHC17Q9NP64 241 aaKnown RBP7.88□□□□□ -1.15
UPF3B-205ENST00000636792 TOMM22Q9NS69 142 aa7.88□□□□□ -1.15
UPF3B-205ENST00000636792 MTMR4Q9NYA4 1195 aa7.88□□□□□ -1.15
UPF3B-205ENST00000636792 NXF1Q9UBU9 619 aaKnown RBP7.88□□□□□ -1.15
UPF3B-205ENST00000636792 SNCAIPQ9Y6H5 919 aa7.88□□□□□ -1.15
UPF3B-205ENST00000636792 A0A0G2JMZ2 1700 aa7.87□□□□□ -1.15
UPF3B-205ENST00000636792 B4E1Z4 1266 aa7.87□□□□□ -1.15
UPF3B-205ENST00000636792 TRAF5O00463 557 aa7.87□□□□□ -1.15
UPF3B-205ENST00000636792 PRC1O43663 620 aa7.87□□□□□ -1.15
UPF3B-205ENST00000636792 DDAH1O94760 285 aa7.87□□□□□ -1.15
UPF3B-205ENST00000636792 GH2P01242 217 aa7.87□□□□□ -1.15
UPF3B-205ENST00000636792 TOP1P11387 765 aaKnown RBP7.87□□□□□ -1.15
UPF3B-205ENST00000636792 AKR1B1P15121 316 aa7.87□□□□□ -1.15
UPF3B-205ENST00000636792 PTPRAP18433 802 aa7.87□□□□□ -1.15
UPF3B-205ENST00000636792 WNT7BP56706 349 aa7.87□□□□□ -1.15
UPF3B-205ENST00000636792 EVCP57679 992 aa7.87□□□□□ -1.15
UPF3B-205ENST00000636792 TFAP4Q01664 338 aa7.87□□□□□ -1.15
UPF3B-205ENST00000636792 EXOSC10Q01780 885 aaKnown RBP7.87□□□□□ -1.15
UPF3B-205ENST00000636792 TTLL12Q14166 644 aaPredicted RBP7.87□□□□□ -1.15
UPF3B-205ENST00000636792 SEC23AQ15436 765 aa7.87□□□□□ -1.15
UPF3B-205ENST00000636792 SH3D19Q5HYK7 790 aa7.87□□□□□ -1.15
UPF3B-205ENST00000636792 CST9Q5W186 159 aa7.87□□□□□ -1.15
UPF3B-205ENST00000636792 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.87□□□□□ -1.15
UPF3B-205ENST00000636792 ZSCAN1Q8NBB4 408 aa7.87□□□□□ -1.15
UPF3B-205ENST00000636792 PROCA1Q8NCQ7 364 aaPredicted RBP7.87□□□□□ -1.15
UPF3B-205ENST00000636792 ZNF280CQ8ND82 737 aa7.87□□□□□ -1.15
UPF3B-205ENST00000636792 NLRP7Q8WX94 980 aa7.87□□□□□ -1.15
UPF3B-205ENST00000636792 IRF7Q92985 503 aa7.87□□□□□ -1.15
UPF3B-205ENST00000636792 CCDC102AQ96A19 550 aa7.87□□□□□ -1.15
UPF3B-205ENST00000636792 CEP95Q96GE4 821 aa7.87□□□□□ -1.15
UPF3B-205ENST00000636792 GOPCQ9HD26 462 aa7.87□□□□□ -1.15
UPF3B-205ENST00000636792 TSHZ2Q9NRE2 1034 aa7.87□□□□□ -1.15
UPF3B-205ENST00000636792 ZSWIM5Q9P217 1185 aa7.87□□□□□ -1.15
UPF3B-205ENST00000636792 KCNH4Q9UQ05 1017 aa7.87□□□□□ -1.15
UPF3B-205ENST00000636792 SLC45A1Q9Y2W3 748 aa7.87□□□□□ -1.15
UPF3B-205ENST00000636792 TMX2Q9Y320 296 aa7.87□□□□□ -1.15
UPF3B-205ENST00000636792 MYH6P13533 1939 aa7.86□□□□□ -1.15
UPF3B-205ENST00000636792 MYPNQ86TC9 1320 aa7.86□□□□□ -1.15
UPF3B-205ENST00000636792 RASSF10A6NK89 507 aa7.86□□□□□ -1.15
UPF3B-205ENST00000636792 FAM196BA6NMK8 535 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms