RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 GTF2IRD2Q86UP8 949 aa4.07□□□□□ -1.76
SCARNA4-202ENST00000625402 HOMER1Q86YM7 354 aa4.07□□□□□ -1.76
SCARNA4-202ENST00000625402 PLD6Q8N2A8 252 aaKnown RBP4.07□□□□□ -1.76
SCARNA4-202ENST00000625402 ZSWIM2Q8NEG5 633 aa4.07□□□□□ -1.76
SCARNA4-202ENST00000625402 C1orf159Q96HA4 380 aa4.07□□□□□ -1.76
SCARNA4-202ENST00000625402 RCC1LQ96I51 464 aaKnown RBP4.07□□□□□ -1.76
SCARNA4-202ENST00000625402 GPATCH3Q96I76 525 aa4.07□□□□□ -1.76
SCARNA4-202ENST00000625402 COX4I2Q96KJ9 171 aa4.07□□□□□ -1.76
SCARNA4-202ENST00000625402 DUSP15Q9H1R2 295 aaPredicted RBP4.07□□□□□ -1.76
SCARNA4-202ENST00000625402 CHST7Q9NS84 486 aa4.07□□□□□ -1.76
SCARNA4-202ENST00000625402 PRR13Q9NZ81 148 aa4.07□□□□□ -1.76
SCARNA4-202ENST00000625402 LRP2BPQ9P2M1 347 aa4.07□□□□□ -1.76
SCARNA4-202ENST00000625402 GTF2IRD1Q9UHL9 959 aa4.07□□□□□ -1.76
SCARNA4-202ENST00000625402 GPR55Q9Y2T6 319 aaPredicted RBP4.07□□□□□ -1.76
SCARNA4-202ENST00000625402 A0A087WZG4 1122 aa4.06□□□□□ -1.76
SCARNA4-202ENST00000625402 TRAV20A0A0B4J274 112 aa4.06□□□□□ -1.76
SCARNA4-202ENST00000625402 ANKRD62A6NC57 917 aa4.06□□□□□ -1.76
SCARNA4-202ENST00000625402 IQCA1LA6NCM1 817 aa4.06□□□□□ -1.76
SCARNA4-202ENST00000625402 PRR19A6NJB7 356 aa4.06□□□□□ -1.76
SCARNA4-202ENST00000625402 GNAT3A8MTJ3 354 aa4.06□□□□□ -1.76
SCARNA4-202ENST00000625402 STXBP3O00186 592 aa4.06□□□□□ -1.76
SCARNA4-202ENST00000625402 DLX3O60479 287 aa4.06□□□□□ -1.76
SCARNA4-202ENST00000625402 VAMP4O75379 141 aa4.06□□□□□ -1.76
SCARNA4-202ENST00000625402 H2AFB1P0C5Y9 115 aa4.06□□□□□ -1.76
SCARNA4-202ENST00000625402 H2AFB2P0C5Z0 115 aa4.06□□□□□ -1.76
SCARNA4-202ENST00000625402 C6orf222P0C671 652 aaPredicted RBP4.06□□□□□ -1.76
SCARNA4-202ENST00000625402 FGFR1P11362 822 aa4.06□□□□□ -1.76
SCARNA4-202ENST00000625402 NTRK3Q16288 839 aa4.06□□□□□ -1.76
SCARNA4-202ENST00000625402 C21orf62-AS1Q17RA5 79 aa4.06□□□□□ -1.76
SCARNA4-202ENST00000625402 LONRF2Q1L5Z9 754 aa4.06□□□□□ -1.76
SCARNA4-202ENST00000625402 PRSS53Q2L4Q9 553 aa4.06□□□□□ -1.76
SCARNA4-202ENST00000625402 GAB4Q2WGN9 574 aa4.06□□□□□ -1.76
SCARNA4-202ENST00000625402 CYP27C1Q4G0S4 372 aa4.06□□□□□ -1.76
SCARNA4-202ENST00000625402 NOL9Q5SY16 702 aaKnown RBP4.06□□□□□ -1.76
SCARNA4-202ENST00000625402 DENND5AQ6IQ26 1287 aa4.06□□□□□ -1.76
SCARNA4-202ENST00000625402 GIMAP7Q8NHV1 300 aa4.06□□□□□ -1.76
SCARNA4-202ENST00000625402 PIWIL2Q8TC59 973 aaKnown RBP4.06□□□□□ -1.76
SCARNA4-202ENST00000625402 FEZ1Q99689 392 aa4.06□□□□□ -1.76
SCARNA4-202ENST00000625402 IER2Q9BTL4 223 aa4.06□□□□□ -1.76
SCARNA4-202ENST00000625402 GPR62Q9BZJ7 368 aa4.06□□□□□ -1.76
SCARNA4-202ENST00000625402 NKX2-4Q9H2Z4 354 aa4.06□□□□□ -1.76
SCARNA4-202ENST00000625402 NCOA5Q9HCD5 579 aaKnown RBP4.06□□□□□ -1.76
SCARNA4-202ENST00000625402 LRRC4CQ9HCJ2 640 aa4.06□□□□□ -1.76
SCARNA4-202ENST00000625402 AKT3Q9Y243 479 aa4.06□□□□□ -1.76
SCARNA4-202ENST00000625402 MRPS23Q9Y3D9 190 aaKnown RBP4.06□□□□□ -1.76
SCARNA4-202ENST00000625402 TRBV23-1A0A0A0MS06 115 aa4.05□□□□□ -1.76
SCARNA4-202ENST00000625402 BLACEA4D250 179 aa4.05□□□□□ -1.76
SCARNA4-202ENST00000625402 H3BS24 57 aa4.05□□□□□ -1.76
SCARNA4-202ENST00000625402 AGRPO00253 132 aa4.05□□□□□ -1.76
SCARNA4-202ENST00000625402 MSTNO14793 375 aa4.05□□□□□ -1.76
SCARNA4-202ENST00000625402 PRODHO43272 600 aa4.05□□□□□ -1.76
SCARNA4-202ENST00000625402 RAPGEF3O95398 923 aa4.05□□□□□ -1.76
SCARNA4-202ENST00000625402 IGHA1P01876 353 aa4.05□□□□□ -1.76
SCARNA4-202ENST00000625402 PABPC1P11940 636 aaKnown RBP4.05□□□□□ -1.76
SCARNA4-202ENST00000625402 IFNGR1P15260 489 aa4.05□□□□□ -1.76
SCARNA4-202ENST00000625402 CANXP27824 592 aaKnown RBP4.05□□□□□ -1.76
SCARNA4-202ENST00000625402 HOXA10P31260 410 aaPredicted RBP4.05□□□□□ -1.76
SCARNA4-202ENST00000625402 GFRA1P56159 465 aa4.05□□□□□ -1.76
SCARNA4-202ENST00000625402 CYP27A1Q02318 531 aa4.05□□□□□ -1.76
SCARNA4-202ENST00000625402 GRB10Q13322 594 aa4.05□□□□□ -1.76
SCARNA4-202ENST00000625402 HSP90AA2PQ14568 343 aaPredicted RBP4.05□□□□□ -1.76
SCARNA4-202ENST00000625402 DPY19L1Q2PZI1 675 aa4.05□□□□□ -1.76
SCARNA4-202ENST00000625402 DALRD3Q5D0E6 543 aaKnown RBP4.05□□□□□ -1.76
SCARNA4-202ENST00000625402 CDKAL1Q5VV42 579 aa4.05□□□□□ -1.76
SCARNA4-202ENST00000625402 WFDC3Q8IUB2 231 aa4.05□□□□□ -1.76
SCARNA4-202ENST00000625402 TMEM145Q8NBT3 493 aa4.05□□□□□ -1.76
SCARNA4-202ENST00000625402 TCTN2Q96GX1 697 aa4.05□□□□□ -1.76
SCARNA4-202ENST00000625402 METTL22Q9BUU2 404 aaPredicted RBP4.05□□□□□ -1.76
SCARNA4-202ENST00000625402 DSCC1Q9BVC3 393 aa4.05□□□□□ -1.76
SCARNA4-202ENST00000625402 OSBPL1AQ9BXW6 950 aa4.05□□□□□ -1.76
SCARNA4-202ENST00000625402 SEMA3GQ9NS98 782 aa4.05□□□□□ -1.76
SCARNA4-202ENST00000625402 KCNH3Q9ULD8 1083 aa4.05□□□□□ -1.76
SCARNA4-202ENST00000625402 PITPNM2Q9BZ72 1349 aa4.04□□□□□ -1.76
SCARNA4-202ENST00000625402 FAM155AB1AL88 458 aaPredicted RBP4.04□□□□□ -1.76
SCARNA4-202ENST00000625402 ARNTLO00327 626 aa4.04□□□□□ -1.76
SCARNA4-202ENST00000625402 NOP56O00567 594 aaKnown RBP4.04□□□□□ -1.76
SCARNA4-202ENST00000625402 IRS4O14654 1257 aaPredicted RBP4.04□□□□□ -1.76
SCARNA4-202ENST00000625402 TGFB1P01137 390 aa4.04□□□□□ -1.76
SCARNA4-202ENST00000625402 CD3EP07766 207 aa4.04□□□□□ -1.76
SCARNA4-202ENST00000625402 ITGB7P26010 798 aa4.04□□□□□ -1.76
SCARNA4-202ENST00000625402 GYS2P54840 703 aa4.04□□□□□ -1.76
SCARNA4-202ENST00000625402 SCRN1Q12765 414 aa4.04□□□□□ -1.76
SCARNA4-202ENST00000625402 RTP2Q5QGT7 225 aa4.04□□□□□ -1.76
SCARNA4-202ENST00000625402 DUSP27Q5VZP5 1158 aa4.04□□□□□ -1.76
SCARNA4-202ENST00000625402 TSPYL5Q86VY4 417 aaPredicted RBP4.04□□□□□ -1.76
SCARNA4-202ENST00000625402 DAGLBQ8NCG7 672 aa4.04□□□□□ -1.76
SCARNA4-202ENST00000625402 KREMEN2Q8NCW0 462 aa4.04□□□□□ -1.76
SCARNA4-202ENST00000625402 HSPA12BQ96MM6 686 aa4.04□□□□□ -1.76
SCARNA4-202ENST00000625402 CLUHP3Q96NS8 147 aa4.04□□□□□ -1.76
SCARNA4-202ENST00000625402 SLC26A8Q96RN1 970 aa4.04□□□□□ -1.76
SCARNA4-202ENST00000625402 DHRS4Q9BTZ2 278 aa4.04□□□□□ -1.76
SCARNA4-202ENST00000625402 ZC3H7BQ9UGR2 993 aaKnown RBP4.04□□□□□ -1.76
SCARNA4-202ENST00000625402 DIS3Q9Y2L1 958 aaKnown RBP4.04□□□□□ -1.76
SCARNA4-202ENST00000625402 ASXL2Q76L83 1435 aa4.04□□□□□ -1.76
SCARNA4-202ENST00000625402 FAM83GA6ND36 823 aa4.03□□□□□ -1.76
SCARNA4-202ENST00000625402 AURKAO14965 403 aa4.03□□□□□ -1.76
SCARNA4-202ENST00000625402 ZNF205O95201 554 aa4.03□□□□□ -1.76
SCARNA4-202ENST00000625402 SCG5P05408 212 aa4.03□□□□□ -1.76
SCARNA4-202ENST00000625402 GSNP06396 782 aa4.03□□□□□ -1.76
SCARNA4-202ENST00000625402 THBDP07204 575 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms