RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 RGPD2P0DJD1 1756 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 RFX7Q2KHR2 1363 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 MST1RQ04912 1400 aa7.79□□□□□ -1.16
NEDD9-216ENST00000620854 CCDC196A0A1B0GTZ2 297 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 FAM170AA1A519 330 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 GOLGA6BA6NDN3 693 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 DCAF8L1A6NGE4 600 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 EBAG9O00559 213 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 IFNAR1P17181 557 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 CORO7P57737 925 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 NLRP5P59047 1200 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 PIK3AP1Q6ZUJ8 805 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 RRP36Q96EU6 259 aaKnown RBP7.78□□□□□ -1.16
NEDD9-216ENST00000620854 NAA15Q9BXJ9 866 aaKnown RBP7.78□□□□□ -1.16
NEDD9-216ENST00000620854 EPB41L4AQ9HCS5 686 aaPredicted RBP7.78□□□□□ -1.16
NEDD9-216ENST00000620854 MKRN1Q9UHC7 482 aaKnown RBP7.78□□□□□ -1.16
NEDD9-216ENST00000620854 CPDO75976 1380 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 MYH8P13535 1937 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 ERLIN2O94905 339 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 LDHCP07864 332 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 NEFHP12036 1026 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 CRKLP46109 303 aaKnown RBP7.78□□□□□ -1.16
NEDD9-216ENST00000620854 AKNAD1Q5T1N1 836 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 TRMT1LQ7Z2T5 733 aaKnown RBP7.78□□□□□ -1.16
NEDD9-216ENST00000620854 CACNA2D4Q7Z3S7 1137 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 KRT27Q7Z3Y8 459 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 SLF2Q8IX21 1173 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 FBXL16Q8N461 479 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 SELENOOQ9BVL4 669 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 MKNK2Q9HBH9 465 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 HPCAL4Q9UM19 191 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 MAP3K15Q6ZN16 1313 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 PDE2AO00408 941 aaPredicted RBP7.78□□□□□ -1.16
NEDD9-216ENST00000620854 MYO1BO43795 1136 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 DEXIO95424 95 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 VEGFAP15692 232 aaPredicted RBP7.78□□□□□ -1.16
NEDD9-216ENST00000620854 RXRBP28702 533 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 GNGT1P63211 74 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 IQCA1Q86XH1 822 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 ZNF654Q8IZM8 581 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 SH2D3CQ8N5H7 860 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 MED4Q9NPJ6 270 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 BMP2KQ9NSY1 1161 aaPredicted RBP7.78□□□□□ -1.16
NEDD9-216ENST00000620854 REXO2Q9Y3B8 237 aaKnown RBP7.78□□□□□ -1.16
NEDD9-216ENST00000620854 RCCD1A6NED2 376 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 PLEKHA8P1O95397 391 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 USP14P54578 494 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 PAK1Q13153 545 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 CCDC96Q2M329 555 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 SPTY2D1Q68D10 685 aaPredicted RBP7.78□□□□□ -1.16
NEDD9-216ENST00000620854 GIGYF2Q6Y7W6 1299 aaKnown RBP7.78□□□□□ -1.16
NEDD9-216ENST00000620854 TADA2BQ86TJ2 420 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 OR8K1Q8NGG5 319 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 UBA5Q9GZZ9 404 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 VAT1LQ9HCJ6 419 aa7.78□□□□□ -1.16
NEDD9-216ENST00000620854 ABCC6O95255 1503 aa7.77□□□□□ -1.16
NEDD9-216ENST00000620854 KDM6AO15550 1401 aaPredicted RBP7.77□□□□□ -1.16
NEDD9-216ENST00000620854 PP2D1A8MPX8 630 aa7.77□□□□□ -1.17
NEDD9-216ENST00000620854 B4DLN1 442 aa7.77□□□□□ -1.17
NEDD9-216ENST00000620854 TRIM37O94972 964 aa7.77□□□□□ -1.17
NEDD9-216ENST00000620854 PRCPP42785 496 aa7.77□□□□□ -1.17
NEDD9-216ENST00000620854 MTIF2P46199 727 aaKnown RBP7.77□□□□□ -1.17
NEDD9-216ENST00000620854 BAG6P46379 1132 aa7.77□□□□□ -1.17
NEDD9-216ENST00000620854 MAP9Q49MG5 647 aa7.77□□□□□ -1.17
NEDD9-216ENST00000620854 TCP11X2Q5H9J9 407 aa7.77□□□□□ -1.17
NEDD9-216ENST00000620854 NT5DC1Q5TFE4 455 aa7.77□□□□□ -1.17
NEDD9-216ENST00000620854 LCORLQ8N3X6 602 aa7.77□□□□□ -1.17
NEDD9-216ENST00000620854 TRIML1Q8N9V2 468 aa7.77□□□□□ -1.17
NEDD9-216ENST00000620854 RASGRP4Q8TDF6 673 aa7.77□□□□□ -1.17
NEDD9-216ENST00000620854 COG1Q8WTW3 980 aa7.77□□□□□ -1.17
NEDD9-216ENST00000620854 TAF4BQ92750 862 aa7.77□□□□□ -1.17
NEDD9-216ENST00000620854 TRIM47Q96LD4 638 aa7.77□□□□□ -1.17
NEDD9-216ENST00000620854 CCDC113Q9H0I3 377 aa7.77□□□□□ -1.17
NEDD9-216ENST00000620854 FOXP1Q9H334 677 aaPredicted RBP7.77□□□□□ -1.17
NEDD9-216ENST00000620854 DMGDHQ9UI17 866 aaKnown RBP7.77□□□□□ -1.17
NEDD9-216ENST00000620854 FAM169AQ9Y6X4 670 aa7.77□□□□□ -1.17
NEDD9-216ENST00000620854 FAM237AA0A1B0GTK4 181 aa7.77□□□□□ -1.17
NEDD9-216ENST00000620854 IRAK1P51617 712 aa7.77□□□□□ -1.17
NEDD9-216ENST00000620854 PDCLQ13371 301 aa7.77□□□□□ -1.17
NEDD9-216ENST00000620854 PTPROQ16827 1216 aa7.77□□□□□ -1.17
NEDD9-216ENST00000620854 TTLL11Q8NHH1 800 aa7.77□□□□□ -1.17
NEDD9-216ENST00000620854 IFT81Q8WYA0 676 aa7.77□□□□□ -1.17
NEDD9-216ENST00000620854 ZC3H12CQ9C0D7 883 aaKnown RBP7.77□□□□□ -1.17
NEDD9-216ENST00000620854 ZNF287Q9HBT7 754 aa7.77□□□□□ -1.17
NEDD9-216ENST00000620854 BCCIPQ9P287 314 aaKnown RBP eCLIP7.77□□□□□ -1.17
NEDD9-216ENST00000620854 CCDC194A0A1B0GVG4 234 aa7.77□□□□□ -1.17
NEDD9-216ENST00000620854 ESYT3A0FGR9 886 aa7.77□□□□□ -1.17
NEDD9-216ENST00000620854 PMS1P54277 932 aaKnown RBP7.77□□□□□ -1.17
NEDD9-216ENST00000620854 HLFQ16534 295 aa7.77□□□□□ -1.17
NEDD9-216ENST00000620854 RNF187Q5TA31 235 aaPredicted RBP7.77□□□□□ -1.17
NEDD9-216ENST00000620854 CDKAL1Q5VV42 579 aa7.77□□□□□ -1.17
NEDD9-216ENST00000620854 CCDC24Q8N4L8 307 aa7.77□□□□□ -1.17
NEDD9-216ENST00000620854 LRRC1Q9BTT6 524 aa7.77□□□□□ -1.17
NEDD9-216ENST00000620854 ANKRD2Q9GZV1 360 aa7.77□□□□□ -1.17
NEDD9-216ENST00000620854 CIAO1O76071 339 aa7.76□□□□□ -1.17
NEDD9-216ENST00000620854 BAG3O95817 575 aa7.76□□□□□ -1.17
NEDD9-216ENST00000620854 PCCAP05165 728 aaPredicted RBP7.76□□□□□ -1.17
NEDD9-216ENST00000620854 PLEKP08567 350 aaPredicted RBP7.76□□□□□ -1.17
NEDD9-216ENST00000620854 PARP1P09874 1014 aaKnown RBP7.76□□□□□ -1.17
NEDD9-216ENST00000620854 BCAMP50895 628 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms