RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 MOV10L1Q9BXT6 1211 aaKnown RBP18.89■□□□□ 0.61
BRCA1-228ENST00000618469 RNF41Q9H4P4 317 aaPredicted RBP18.89■□□□□ 0.61
BRCA1-228ENST00000618469 IL17RBQ9NRM6 502 aa18.89■□□□□ 0.61
BRCA1-228ENST00000618469 IVNS1ABPQ9Y6Y0 642 aa18.89■□□□□ 0.61
BRCA1-228ENST00000618469 UNC80Q8N2C7 3258 aa18.89■□□□□ 0.61
BRCA1-228ENST00000618469 RPTORQ8N122 1335 aa18.89■□□□□ 0.61
BRCA1-228ENST00000618469 PCP11498 1178 aaKnown RBP18.88■□□□□ 0.61
BRCA1-228ENST00000618469 MDM2Q00987 491 aaPredicted RBP18.88■□□□□ 0.61
BRCA1-228ENST00000618469 SLFN13Q68D06 897 aa18.88■□□□□ 0.61
BRCA1-228ENST00000618469 TRIB2Q92519 343 aa18.88■□□□□ 0.61
BRCA1-228ENST00000618469 CHMP4CQ96CF2 233 aa18.88■□□□□ 0.61
BRCA1-228ENST00000618469 SLF1Q9BQI6 1058 aa18.88■□□□□ 0.61
BRCA1-228ENST00000618469 PFASO15067 1338 aa18.87■□□□□ 0.61
BRCA1-228ENST00000618469 RGS2P41220 211 aa18.87■□□□□ 0.61
BRCA1-228ENST00000618469 IMMTQ16891 758 aaKnown RBP18.87■□□□□ 0.61
BRCA1-228ENST00000618469 LRIT3Q3SXY7 679 aa18.87■□□□□ 0.61
BRCA1-228ENST00000618469 MORN1Q5T089 497 aa18.87■□□□□ 0.61
BRCA1-228ENST00000618469 ANKLE1Q8NAG6 615 aa18.87■□□□□ 0.61
BRCA1-228ENST00000618469 APBA2Q99767 749 aa18.87■□□□□ 0.61
BRCA1-228ENST00000618469 CTNNA3Q9UI47 895 aa18.87■□□□□ 0.61
BRCA1-228ENST00000618469 VWA5AO00534 786 aa18.86■□□□□ 0.61
BRCA1-228ENST00000618469 BMP3P12645 472 aa18.86■□□□□ 0.61
BRCA1-228ENST00000618469 ZKSCAN1P17029 563 aaPredicted RBP18.86■□□□□ 0.61
BRCA1-228ENST00000618469 ERCC3P19447 782 aa18.86■□□□□ 0.61
BRCA1-228ENST00000618469 TMEM132BQ14DG7 1078 aa18.86■□□□□ 0.61
BRCA1-228ENST00000618469 GPR153Q6NV75 609 aa18.86■□□□□ 0.61
BRCA1-228ENST00000618469 RASGRP2Q7LDG7 609 aa18.86■□□□□ 0.61
BRCA1-228ENST00000618469 SHCBP1Q8NEM2 672 aa18.86■□□□□ 0.61
BRCA1-228ENST00000618469 ADAMTS5Q9UNA0 930 aa18.86■□□□□ 0.61
BRCA1-228ENST00000618469 MTMR7Q9Y216 660 aa18.86■□□□□ 0.61
BRCA1-228ENST00000618469 SLC15A5A6NIM6 579 aa18.85■□□□□ 0.61
BRCA1-228ENST00000618469 PRKAR2AP13861 404 aaKnown RBP18.85■□□□□ 0.61
BRCA1-228ENST00000618469 PTPREP23469 700 aa18.85■□□□□ 0.61
BRCA1-228ENST00000618469 MAP2K5Q13163 448 aa18.85■□□□□ 0.61
BRCA1-228ENST00000618469 GRB14Q14449 540 aa18.85■□□□□ 0.61
BRCA1-228ENST00000618469 NCAPG2Q86XI2 1143 aa18.85■□□□□ 0.61
BRCA1-228ENST00000618469 ESR2Q92731 530 aa18.85■□□□□ 0.61
BRCA1-228ENST00000618469 USP6NLQ92738 828 aa18.85■□□□□ 0.61
BRCA1-228ENST00000618469 KIFC2Q96AC6 838 aa18.85■□□□□ 0.61
BRCA1-228ENST00000618469 SGSM2O43147 1006 aa18.84■□□□□ 0.61
BRCA1-228ENST00000618469 CENPBP07199 599 aaPredicted RBP18.84■□□□□ 0.61
BRCA1-228ENST00000618469 XRCC5P13010 732 aaKnown RBP18.84■□□□□ 0.61
BRCA1-228ENST00000618469 SLC1A4P43007 532 aa18.84■□□□□ 0.61
BRCA1-228ENST00000618469 IKQ13123 557 aaPredicted RBP18.84■□□□□ 0.61
BRCA1-228ENST00000618469 PRPF38AQ8NAV1 312 aaKnown RBP18.84■□□□□ 0.61
BRCA1-228ENST00000618469 REPS2Q8NFH8 660 aa18.84■□□□□ 0.61
BRCA1-228ENST00000618469 GMCL1Q96IK5 515 aa18.84■□□□□ 0.61
BRCA1-228ENST00000618469 FEM1BQ9UK73 627 aa18.84■□□□□ 0.61
BRCA1-228ENST00000618469 ZNF214Q9UL59 606 aaPredicted RBP18.84■□□□□ 0.61
BRCA1-228ENST00000618469 OGDHLQ9ULD0 1010 aa18.84■□□□□ 0.61
BRCA1-228ENST00000618469 B4E1Z4 1266 aa18.83■□□□□ 0.6
BRCA1-228ENST00000618469 TMEM232C9JQI7 657 aa18.83■□□□□ 0.6
BRCA1-228ENST00000618469 KDM4AO75164 1064 aa18.83■□□□□ 0.6
BRCA1-228ENST00000618469 CAPN2P17655 700 aa18.83■□□□□ 0.6
BRCA1-228ENST00000618469 MCCP23508 829 aa18.83■□□□□ 0.6
BRCA1-228ENST00000618469 NOVP48745 357 aa18.83■□□□□ 0.6
BRCA1-228ENST00000618469 STAT2P52630 851 aa18.83■□□□□ 0.6
BRCA1-228ENST00000618469 PTH1RQ03431 593 aa18.83■□□□□ 0.6
BRCA1-228ENST00000618469 CCL14Q16627 93 aa18.83■□□□□ 0.6
BRCA1-228ENST00000618469 LRRC26Q2I0M4 334 aa18.83■□□□□ 0.6
BRCA1-228ENST00000618469 CCDC96Q2M329 555 aa18.83■□□□□ 0.6
BRCA1-228ENST00000618469 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.83■□□□□ 0.6
BRCA1-228ENST00000618469 ZKSCAN3Q9BRR0 538 aa18.83■□□□□ 0.6
BRCA1-228ENST00000618469 MROH8Q9H579 483 aa18.83■□□□□ 0.6
BRCA1-228ENST00000618469 TCP11L1Q9NUJ3 509 aa18.83■□□□□ 0.6
BRCA1-228ENST00000618469 CTDP1Q9Y5B0 961 aaPredicted RBP18.83■□□□□ 0.6
BRCA1-228ENST00000618469 SLC25A27O95847 323 aa18.82■□□□□ 0.6
BRCA1-228ENST00000618469 TOP1P11387 765 aaKnown RBP18.82■□□□□ 0.6
BRCA1-228ENST00000618469 ADORA2AP29274 412 aa18.82■□□□□ 0.6
BRCA1-228ENST00000618469 CCND3P30281 292 aaPredicted RBP18.82■□□□□ 0.6
BRCA1-228ENST00000618469 STAT3P40763 770 aa18.82■□□□□ 0.6
BRCA1-228ENST00000618469 BMP2KLQ5H9B9 411 aa18.82■□□□□ 0.6
BRCA1-228ENST00000618469 KCTD1Q719H9 257 aa18.82■□□□□ 0.6
BRCA1-228ENST00000618469 RIOX2Q8IUF8 465 aa18.82■□□□□ 0.6
BRCA1-228ENST00000618469 TRMT44Q8IYL2 757 aaKnown RBP18.82■□□□□ 0.6
BRCA1-228ENST00000618469 GUCD1Q96NT3 240 aa18.82■□□□□ 0.6
BRCA1-228ENST00000618469 TMEM47Q9BQJ4 181 aa18.82■□□□□ 0.6
BRCA1-228ENST00000618469 ZBED4O75132 1171 aa18.81■□□□□ 0.6
BRCA1-228ENST00000618469 COPB2P35606 906 aa18.81■□□□□ 0.6
BRCA1-228ENST00000618469 NT5C2P49902 561 aa18.81■□□□□ 0.6
BRCA1-228ENST00000618469 CACNB2Q08289 660 aaPredicted RBP18.81■□□□□ 0.6
BRCA1-228ENST00000618469 SNRNP48Q6IEG0 339 aaKnown RBP18.81■□□□□ 0.6
BRCA1-228ENST00000618469 CPXCR1Q8N123 301 aa18.81■□□□□ 0.6
BRCA1-228ENST00000618469 TEX13BQ9BXU2 312 aa18.81■□□□□ 0.6
BRCA1-228ENST00000618469 STRNO43815 780 aa18.8■□□□□ 0.6
BRCA1-228ENST00000618469 RCSD1Q6JBY9 416 aa18.8■□□□□ 0.6
BRCA1-228ENST00000618469 DPP9Q86TI2 863 aa18.8■□□□□ 0.6
BRCA1-228ENST00000618469 FAM160B2Q86V87 743 aa18.8■□□□□ 0.6
BRCA1-228ENST00000618469 IQCA1Q86XH1 822 aa18.8■□□□□ 0.6
BRCA1-228ENST00000618469 DCAF4Q8WV16 495 aa18.8■□□□□ 0.6
BRCA1-228ENST00000618469 KRT23Q9C075 422 aa18.8■□□□□ 0.6
BRCA1-228ENST00000618469 CNNM2Q9H8M5 875 aa18.8■□□□□ 0.6
BRCA1-228ENST00000618469 SLC38A10Q9HBR0 1119 aa18.8■□□□□ 0.6
BRCA1-228ENST00000618469 U3KPZ7 1027 aaPredicted RBP18.8■□□□□ 0.6
BRCA1-228ENST00000618469 PLXNA1Q9UIW2 1896 aa18.8■□□□□ 0.6
BRCA1-228ENST00000618469 FRMPD2Q68DX3 1309 aaPredicted RBP18.79■□□□□ 0.6
BRCA1-228ENST00000618469 CYP21A2P08686 494 aa18.79■□□□□ 0.6
BRCA1-228ENST00000618469 HOXC6P09630 235 aa18.79■□□□□ 0.6
BRCA1-228ENST00000618469 FCER1AP12319 257 aa18.79■□□□□ 0.6
BRCA1-228ENST00000618469 SLC4A3P48751 1232 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms