RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 UBA7P41226 1012 aa22.92■■□□□ 1.26
SSBP3-216ENST00000610401 NAP1L1P55209 391 aaKnown RBP22.92■■□□□ 1.26
SSBP3-216ENST00000610401 PIP4K2BP78356 416 aa22.92■■□□□ 1.26
SSBP3-216ENST00000610401 FUT2Q10981 343 aa22.92■■□□□ 1.26
SSBP3-216ENST00000610401 CTR9Q6PD62 1173 aa22.92■■□□□ 1.26
SSBP3-216ENST00000610401 GOLGA5Q8TBA6 731 aa22.92■■□□□ 1.26
SSBP3-216ENST00000610401 NKX1-1Q15270 411 aaPredicted RBP22.91■■□□□ 1.26
SSBP3-216ENST00000610401 OR8K1Q8NGG5 319 aa22.91■■□□□ 1.26
SSBP3-216ENST00000610401 FAM207AQ9NSI2 230 aaPredicted RBP22.91■■□□□ 1.26
SSBP3-216ENST00000610401 MAGEC2Q9UBF1 373 aaPredicted RBP22.91■■□□□ 1.26
SSBP3-216ENST00000610401 USP17L8P0C7I0 530 aa22.91■■□□□ 1.26
SSBP3-216ENST00000610401 IDEP14735 1019 aa22.91■■□□□ 1.26
SSBP3-216ENST00000610401 MTIF2P46199 727 aaKnown RBP22.91■■□□□ 1.26
SSBP3-216ENST00000610401 CCDC96Q2M329 555 aa22.91■■□□□ 1.26
SSBP3-216ENST00000610401 CCDC152Q4G0S7 254 aa22.91■■□□□ 1.26
SSBP3-216ENST00000610401 TICAM2Q86XR7 235 aa22.91■■□□□ 1.26
SSBP3-216ENST00000610401 IRF2BP1Q8IU81 584 aa22.91■■□□□ 1.26
SSBP3-216ENST00000610401 JAKMIP2Q96AA8 810 aa22.91■■□□□ 1.26
SSBP3-216ENST00000610401 MCM9Q9NXL9 1143 aa22.91■■□□□ 1.26
SSBP3-216ENST00000610401 SAR1BQ9Y6B6 198 aa22.91■■□□□ 1.26
SSBP3-216ENST00000610401 PRPF3O43395 683 aaKnown RBP22.91■■□□□ 1.26
SSBP3-216ENST00000610401 SCG2P13521 617 aa22.91■■□□□ 1.26
SSBP3-216ENST00000610401 ATP2C1P98194 919 aaPredicted RBP22.91■■□□□ 1.26
SSBP3-216ENST00000610401 TBC1D8BQ0IIM8 1120 aa22.91■■□□□ 1.26
SSBP3-216ENST00000610401 PDXDC2PQ6P474 469 aa22.91■■□□□ 1.26
SSBP3-216ENST00000610401 SLC44A5Q8NCS7 719 aa22.91■■□□□ 1.26
SSBP3-216ENST00000610401 HDAC7Q8WUI4 952 aa22.91■■□□□ 1.26
SSBP3-216ENST00000610401 ZNF512BQ96KM6 892 aaPredicted RBP22.91■■□□□ 1.26
SSBP3-216ENST00000610401 FCER1AP12319 257 aa22.9■■□□□ 1.26
SSBP3-216ENST00000610401 HERVK_113P62684 666 aa22.9■■□□□ 1.26
SSBP3-216ENST00000610401 TYW1BQ6NUM6 668 aa22.9■■□□□ 1.26
SSBP3-216ENST00000610401 TMTC3Q6ZXV5 915 aa22.9■■□□□ 1.26
SSBP3-216ENST00000610401 CSGALNACT2Q8N6G5 542 aa22.9■■□□□ 1.26
SSBP3-216ENST00000610401 USP17L3A6NCW0 530 aa22.9■■□□□ 1.26
SSBP3-216ENST00000610401 USP17L4A6NCW7 530 aa22.9■■□□□ 1.26
SSBP3-216ENST00000610401 USP17L1Q7RTZ2 530 aa22.9■■□□□ 1.26
SSBP3-216ENST00000610401 PHRF1Q9P1Y6 1649 aaKnown RBP22.9■■□□□ 1.26
SSBP3-216ENST00000610401 CCDC194A0A1B0GVG4 234 aa22.89■■□□□ 1.26
SSBP3-216ENST00000610401 PDE2AO00408 941 aaPredicted RBP22.89■■□□□ 1.26
SSBP3-216ENST00000610401 IPO7O95373 1038 aaKnown RBP22.89■■□□□ 1.26
SSBP3-216ENST00000610401 E2F4Q16254 413 aa22.89■■□□□ 1.26
SSBP3-216ENST00000610401 ZNF384Q8TF68 577 aa22.89■■□□□ 1.26
SSBP3-216ENST00000610401 RWDD2AQ9UIY3 292 aa22.89■■□□□ 1.26
SSBP3-216ENST00000610401 RTL9Q8NET4 1388 aa22.89■■□□□ 1.26
SSBP3-216ENST00000610401 GGCXP38435 758 aa22.89■■□□□ 1.25
SSBP3-216ENST00000610401 MB21D1Q8N884 522 aa22.89■■□□□ 1.25
SSBP3-216ENST00000610401 LETM2Q2VYF4 491 aa22.89■■□□□ 1.25
SSBP3-216ENST00000610401 ZNF658Q5TYW1 1059 aaPredicted RBP22.89■■□□□ 1.25
SSBP3-216ENST00000610401 SRLQ86TD4 932 aa22.89■■□□□ 1.25
SSBP3-216ENST00000610401 KANSL2Q9H9L4 492 aa22.89■■□□□ 1.25
SSBP3-216ENST00000610401 ADAMTS7Q9UKP4 1686 aa22.88■■□□□ 1.25
SSBP3-216ENST00000610401 GTPBP6O43824 516 aaPredicted RBP22.88■■□□□ 1.25
SSBP3-216ENST00000610401 WDR59Q6PJI9 974 aa22.88■■□□□ 1.25
SSBP3-216ENST00000610401 CRACR2AQ9BSW2 395 aa22.88■■□□□ 1.25
SSBP3-216ENST00000610401 MLXIPQ9HAP2 919 aa22.88■■□□□ 1.25
SSBP3-216ENST00000610401 LRWD1Q9UFC0 647 aa22.88■■□□□ 1.25
SSBP3-216ENST00000610401 MSANTD4Q8NCY6 345 aa22.88■■□□□ 1.25
SSBP3-216ENST00000610401 TRPM3Q9HCF6 1732 aaPredicted RBP22.88■■□□□ 1.25
SSBP3-216ENST00000610401 WHAMMP3Q1A5X7 153 aa22.87■■□□□ 1.25
SSBP3-216ENST00000610401 DTHD1Q6ZMT9 781 aa22.87■■□□□ 1.25
SSBP3-216ENST00000610401 DYMQ7RTS9 669 aa22.87■■□□□ 1.25
SSBP3-216ENST00000610401 SMARCC1Q92922 1105 aaPredicted RBP22.87■■□□□ 1.25
SSBP3-216ENST00000610401 RIOK1Q9BRS2 568 aaKnown RBP22.87■■□□□ 1.25
SSBP3-216ENST00000610401 SLC39A2Q9NP94 309 aa22.87■■□□□ 1.25
SSBP3-216ENST00000610401 LIMA1Q9UHB6 759 aaKnown RBP22.87■■□□□ 1.25
SSBP3-216ENST00000610401 SAP30BPQ9UHR5 308 aaKnown RBP22.87■■□□□ 1.25
SSBP3-216ENST00000610401 RAB21Q9UL25 225 aa22.87■■□□□ 1.25
SSBP3-216ENST00000610401 CNTNAP5Q8WYK1 1306 aa22.87■■□□□ 1.25
SSBP3-216ENST00000610401 KIF1AQ12756 1690 aa22.87■■□□□ 1.25
SSBP3-216ENST00000610401 TULP1O00294 542 aaPredicted RBP22.87■■□□□ 1.25
SSBP3-216ENST00000610401 NCK2O43639 380 aa22.87■■□□□ 1.25
SSBP3-216ENST00000610401 ASIC1P78348 528 aa22.87■■□□□ 1.25
SSBP3-216ENST00000610401 RRP36Q96EU6 259 aaKnown RBP22.87■■□□□ 1.25
SSBP3-216ENST00000610401 TUBGCP2Q9BSJ2 902 aa22.87■■□□□ 1.25
SSBP3-216ENST00000610401 TFAP4Q01664 338 aa22.87■■□□□ 1.25
SSBP3-216ENST00000610401 ZNF34Q8IZ26 560 aa22.87■■□□□ 1.25
SSBP3-216ENST00000610401 LRRC15Q8TF66 581 aa22.87■■□□□ 1.25
SSBP3-216ENST00000610401 ARID5AQ03989 594 aa22.86■■□□□ 1.25
SSBP3-216ENST00000610401 CAVIN4Q5BKX8 364 aa22.86■■□□□ 1.25
SSBP3-216ENST00000610401 LRRC31Q6UY01 552 aa22.86■■□□□ 1.25
SSBP3-216ENST00000610401 CCDC155Q8N6L0 562 aa22.86■■□□□ 1.25
SSBP3-216ENST00000610401 MMRN2Q9H8L6 949 aa22.86■■□□□ 1.25
SSBP3-216ENST00000610401 GLI3P10071 1580 aa22.86■■□□□ 1.25
SSBP3-216ENST00000610401 MYH2Q9UKX2 1941 aa22.86■■□□□ 1.25
SSBP3-216ENST00000610401 CRKLP46109 303 aaKnown RBP22.86■■□□□ 1.25
SSBP3-216ENST00000610401 PDE4DQ08499 809 aa22.86■■□□□ 1.25
SSBP3-216ENST00000610401 TMC4Q7Z404 712 aa22.86■■□□□ 1.25
SSBP3-216ENST00000610401 CELF1Q92879 486 aaKnown RBP22.86■■□□□ 1.25
SSBP3-216ENST00000610401 DEF6Q9H4E7 631 aa22.86■■□□□ 1.25
SSBP3-216ENST00000610401 NHEJ1Q9H9Q4 299 aaPredicted RBP22.86■■□□□ 1.25
SSBP3-216ENST00000610401 ATRNO75882 1429 aa22.86■■□□□ 1.25
SSBP3-216ENST00000610401 ERFEQ4G0M1 354 aa22.85■■□□□ 1.25
SSBP3-216ENST00000610401 GPR101Q96P66 508 aaPredicted RBP22.85■■□□□ 1.25
SSBP3-216ENST00000610401 ZNHIT6Q9NWK9 470 aaKnown RBP22.85■■□□□ 1.25
SSBP3-216ENST00000610401 EXOC5O00471 708 aa22.85■■□□□ 1.25
SSBP3-216ENST00000610401 BUB1O43683 1085 aa22.85■■□□□ 1.25
SSBP3-216ENST00000610401 AMPD2Q01433 879 aa22.85■■□□□ 1.25
SSBP3-216ENST00000610401 MECOMQ03112 1051 aa22.85■■□□□ 1.25
SSBP3-216ENST00000610401 STIM1Q13586 685 aa22.85■■□□□ 1.25
SSBP3-216ENST00000610401 SND1Q7KZF4 910 aaKnown RBP eCLIP22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms