RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 SCG2P13521 617 aa13.37□□□□□ -0.27
CTCFL-221ENST00000608903 TAL1P17542 331 aaPredicted RBP13.37□□□□□ -0.27
CTCFL-221ENST00000608903 HMGCS2P54868 508 aa13.37□□□□□ -0.27
CTCFL-221ENST00000608903 NPY5RQ15761 445 aa13.37□□□□□ -0.27
CTCFL-221ENST00000608903 WWC2Q6AWC2 1192 aa13.37□□□□□ -0.27
CTCFL-221ENST00000608903 FAM173BQ6P4H8 233 aa13.37□□□□□ -0.27
CTCFL-221ENST00000608903 HOMER1Q86YM7 354 aa13.37□□□□□ -0.27
CTCFL-221ENST00000608903 SPDYE5A6NIY4 337 aa13.36□□□□□ -0.27
CTCFL-221ENST00000608903 IRF6O14896 467 aa13.36□□□□□ -0.27
CTCFL-221ENST00000608903 F13A1P00488 732 aa13.36□□□□□ -0.27
CTCFL-221ENST00000608903 VCAM1P19320 739 aa13.36□□□□□ -0.27
CTCFL-221ENST00000608903 PDCP20941 246 aa13.36□□□□□ -0.27
CTCFL-221ENST00000608903 RESTQ13127 1097 aa13.36□□□□□ -0.27
CTCFL-221ENST00000608903 OTUD5Q96G74 571 aa13.36□□□□□ -0.27
CTCFL-221ENST00000608903 SH2D4AQ9H788 454 aa13.36□□□□□ -0.27
CTCFL-221ENST00000608903 AS3MTQ9HBK9 375 aa13.36□□□□□ -0.27
CTCFL-221ENST00000608903 GBA2Q9HCG7 927 aaPredicted RBP13.36□□□□□ -0.27
CTCFL-221ENST00000608903 ISY1Q9ULR0 285 aaKnown RBP13.36□□□□□ -0.27
CTCFL-221ENST00000608903 WDR33Q9C0J8 1336 aaKnown RBP13.36□□□□□ -0.27
CTCFL-221ENST00000608903 TRPM7Q96QT4 1865 aa13.36□□□□□ -0.27
CTCFL-221ENST00000608903 RLFQ13129 1914 aa13.36□□□□□ -0.27
CTCFL-221ENST00000608903 SYDE2Q5VT97 1194 aa13.36□□□□□ -0.27
CTCFL-221ENST00000608903 ERO1BQ86YB8 467 aa13.36□□□□□ -0.27
CTCFL-221ENST00000608903 OXER1Q8TDS5 423 aa13.36□□□□□ -0.27
CTCFL-221ENST00000608903 C12orf42Q96LP6 360 aa13.36□□□□□ -0.27
CTCFL-221ENST00000608903 PRR12Q9ULL5 1215 aa13.36□□□□□ -0.27
CTCFL-221ENST00000608903 PASKQ96RG2 1323 aa13.35□□□□□ -0.27
CTCFL-221ENST00000608903 STXBP3O00186 592 aa13.35□□□□□ -0.27
CTCFL-221ENST00000608903 AKAP17AQ02040 695 aaKnown RBP13.35□□□□□ -0.27
CTCFL-221ENST00000608903 MOGSQ13724 837 aa13.35□□□□□ -0.27
CTCFL-221ENST00000608903 FOXD4L6Q3SYB3 417 aaPredicted RBP13.35□□□□□ -0.27
CTCFL-221ENST00000608903 SH3D19Q5HYK7 790 aa13.35□□□□□ -0.27
CTCFL-221ENST00000608903 FOXD4L3Q6VB84 417 aaPredicted RBP13.35□□□□□ -0.27
CTCFL-221ENST00000608903 OPTNQ96CV9 577 aa13.35□□□□□ -0.27
CTCFL-221ENST00000608903 PARP14Q460N5 1801 aa13.35□□□□□ -0.27
CTCFL-221ENST00000608903 H3BQV1 296 aa13.34□□□□□ -0.27
CTCFL-221ENST00000608903 PPATQ06203 517 aa13.34□□□□□ -0.27
CTCFL-221ENST00000608903 QRICH1Q2TAL8 776 aa13.34□□□□□ -0.27
CTCFL-221ENST00000608903 IFFO2Q5TF58 517 aa13.34□□□□□ -0.27
CTCFL-221ENST00000608903 LPAR1Q92633 364 aa13.34□□□□□ -0.27
CTCFL-221ENST00000608903 COA7Q96BR5 231 aa13.34□□□□□ -0.27
CTCFL-221ENST00000608903 RRP36Q96EU6 259 aaKnown RBP13.34□□□□□ -0.27
CTCFL-221ENST00000608903 PHF20Q9BVI0 1012 aa13.34□□□□□ -0.27
CTCFL-221ENST00000608903 RPAP3Q9H6T3 665 aaPredicted RBP13.34□□□□□ -0.27
CTCFL-221ENST00000608903 C19orf81C9J6K1 198 aa13.34□□□□□ -0.27
CTCFL-221ENST00000608903 WDR46O15213 610 aaKnown RBP13.34□□□□□ -0.27
CTCFL-221ENST00000608903 TRAK2O60296 914 aa13.34□□□□□ -0.27
CTCFL-221ENST00000608903 MMP1P03956 469 aa13.34□□□□□ -0.27
CTCFL-221ENST00000608903 KIF23Q02241 960 aaPredicted RBP13.34□□□□□ -0.27
CTCFL-221ENST00000608903 NOM1Q5C9Z4 860 aaKnown RBP13.34□□□□□ -0.27
CTCFL-221ENST00000608903 TREML2Q5T2D2 321 aa13.34□□□□□ -0.27
CTCFL-221ENST00000608903 POTEEQ6S8J3 1075 aa13.34□□□□□ -0.27
CTCFL-221ENST00000608903 WASF1Q92558 559 aa13.34□□□□□ -0.27
CTCFL-221ENST00000608903 WNK4Q96J92 1243 aa13.34□□□□□ -0.27
CTCFL-221ENST00000608903 KCNH4Q9UQ05 1017 aa13.34□□□□□ -0.27
CTCFL-221ENST00000608903 KIF3AQ9Y496 699 aa13.34□□□□□ -0.27
CTCFL-221ENST00000608903 TCHHQ07283 1943 aa13.33□□□□□ -0.28
CTCFL-221ENST00000608903 PNMA6FA0A0J9YX94 578 aa13.33□□□□□ -0.28
CTCFL-221ENST00000608903 BTBD18B2RXH4 712 aa13.33□□□□□ -0.28
CTCFL-221ENST00000608903 PLA2G6O60733 806 aa13.33□□□□□ -0.28
CTCFL-221ENST00000608903 STAT2P52630 851 aa13.33□□□□□ -0.28
CTCFL-221ENST00000608903 USP14P54578 494 aa13.33□□□□□ -0.28
CTCFL-221ENST00000608903 PPIL2Q13356 520 aa13.33□□□□□ -0.28
CTCFL-221ENST00000608903 CDC37Q16543 378 aaPredicted RBP13.33□□□□□ -0.28
CTCFL-221ENST00000608903 CLEC17AQ6ZS10 378 aa13.33□□□□□ -0.28
CTCFL-221ENST00000608903 HEATR3Q7Z4Q2 680 aa13.33□□□□□ -0.28
CTCFL-221ENST00000608903 KIFC2Q96AC6 838 aa13.33□□□□□ -0.28
CTCFL-221ENST00000608903 SLC10A4Q96EP9 437 aa13.33□□□□□ -0.28
CTCFL-221ENST00000608903 BARHL2Q9NY43 387 aa13.33□□□□□ -0.28
CTCFL-221ENST00000608903 FEM1BQ9UK73 627 aa13.33□□□□□ -0.28
CTCFL-221ENST00000608903 A0A0G2JLL6 359 aaPredicted RBP13.33□□□□□ -0.28
CTCFL-221ENST00000608903 ZBTB5O15062 677 aa13.33□□□□□ -0.28
CTCFL-221ENST00000608903 FKBP1BP68106 108 aa13.33□□□□□ -0.28
CTCFL-221ENST00000608903 NR5A1Q13285 461 aa13.33□□□□□ -0.28
CTCFL-221ENST00000608903 EARS2Q5JPH6 523 aaKnown RBP13.33□□□□□ -0.28
CTCFL-221ENST00000608903 SAMD1Q6SPF0 538 aaPredicted RBP13.33□□□□□ -0.28
CTCFL-221ENST00000608903 PRRT2Q7Z6L0 340 aaPredicted RBP13.33□□□□□ -0.28
CTCFL-221ENST00000608903 C2orf69Q8N8R5 385 aa13.33□□□□□ -0.28
CTCFL-221ENST00000608903 DDX11L8A8MPP1 907 aa13.32□□□□□ -0.28
CTCFL-221ENST00000608903 BAG4O95429 457 aaKnown RBP13.32□□□□□ -0.28
CTCFL-221ENST00000608903 IKQ13123 557 aaPredicted RBP13.32□□□□□ -0.28
CTCFL-221ENST00000608903 MCTP1Q6DN14 999 aa13.32□□□□□ -0.28
CTCFL-221ENST00000608903 RGS22Q8NE09 1264 aa13.32□□□□□ -0.28
CTCFL-221ENST00000608903 TNFRSF25Q93038 417 aa13.32□□□□□ -0.28
CTCFL-221ENST00000608903 GBP4Q96PP9 640 aa13.32□□□□□ -0.28
CTCFL-221ENST00000608903 RANBP17Q9H2T7 1088 aaKnown RBP13.32□□□□□ -0.28
CTCFL-221ENST00000608903 RBM27Q9P2N5 1060 aaKnown RBP13.32□□□□□ -0.28
CTCFL-221ENST00000608903 LOC285556D6RIA3 1793 aa13.32□□□□□ -0.28
CTCFL-221ENST00000608903 FAM205CA6NFA0 338 aa13.31□□□□□ -0.28
CTCFL-221ENST00000608903 CXCL11O14625 94 aa13.31□□□□□ -0.28
CTCFL-221ENST00000608903 MKRN3Q13064 507 aaKnown RBP13.31□□□□□ -0.28
CTCFL-221ENST00000608903 CATSPERGQ6ZRH7 1159 aa13.31□□□□□ -0.28
CTCFL-221ENST00000608903 DIS3L2Q8IYB7 885 aaKnown RBP13.31□□□□□ -0.28
CTCFL-221ENST00000608903 FAM43AQ8N2R8 423 aa13.31□□□□□ -0.28
CTCFL-221ENST00000608903 RBM46Q8TBY0 533 aaKnown RBP13.31□□□□□ -0.28
CTCFL-221ENST00000608903 CHURC1Q8WUH1 139 aa13.31□□□□□ -0.28
CTCFL-221ENST00000608903 TANGO6Q9C0B7 1094 aa13.31□□□□□ -0.28
CTCFL-221ENST00000608903 SH3GLB2Q9NR46 395 aa13.31□□□□□ -0.28
CTCFL-221ENST00000608903 ZNF536O15090 1300 aa13.31□□□□□ -0.28
CTCFL-221ENST00000608903 UNCXA6NJT0 531 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms