RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 DDNO94850 711 aaPredicted RBP24.76■■□□□ 1.55
USP6NL-204ENST00000606752 NDUFB10O96000 172 aa24.76■■□□□ 1.55
USP6NL-204ENST00000606752 ANGEL2Q5VTE6 544 aaKnown RBP24.76■■□□□ 1.55
USP6NL-204ENST00000606752 ZMYND12Q9H0C1 365 aa24.76■■□□□ 1.55
USP6NL-204ENST00000606752 DACT1Q9NYF0 836 aa24.76■■□□□ 1.55
USP6NL-204ENST00000606752 NOL7Q9UMY1 257 aaKnown RBP24.76■■□□□ 1.55
USP6NL-204ENST00000606752 TMX2Q9Y320 296 aa24.76■■□□□ 1.55
USP6NL-204ENST00000606752 UTRNP46939 3433 aa24.76■■□□□ 1.55
USP6NL-204ENST00000606752 PNMA6FA0A0J9YX94 578 aa24.75■■□□□ 1.55
USP6NL-204ENST00000606752 ASNSP08243 561 aa24.75■■□□□ 1.55
USP6NL-204ENST00000606752 SLC16A2P36021 539 aa24.75■■□□□ 1.55
USP6NL-204ENST00000606752 NAPAP54920 295 aa24.75■■□□□ 1.55
USP6NL-204ENST00000606752 C9orf131Q5VYM1 1079 aa24.75■■□□□ 1.55
USP6NL-204ENST00000606752 GAS2L3Q86XJ1 694 aa24.75■■□□□ 1.55
USP6NL-204ENST00000606752 MTMR8Q96EF0 704 aa24.75■■□□□ 1.55
USP6NL-204ENST00000606752 DDX19AQ9NUU7 478 aaKnown RBP24.75■■□□□ 1.55
USP6NL-204ENST00000606752 CEP131Q9UPN4 1083 aa24.75■■□□□ 1.55
USP6NL-204ENST00000606752 FAM205CA6NFA0 338 aa24.75■■□□□ 1.55
USP6NL-204ENST00000606752 MARCKSP29966 332 aaPredicted RBP24.75■■□□□ 1.55
USP6NL-204ENST00000606752 PCDHB6Q9Y5E3 794 aa24.75■■□□□ 1.55
USP6NL-204ENST00000606752 M0R2N6 131 aa24.74■■□□□ 1.55
USP6NL-204ENST00000606752 NR1I2O75469 434 aa24.74■■□□□ 1.55
USP6NL-204ENST00000606752 AXDND1Q5T1B0 1012 aaPredicted RBP24.74■■□□□ 1.55
USP6NL-204ENST00000606752 TRIM75PA6NK02 468 aa24.73■■□□□ 1.55
USP6NL-204ENST00000606752 ZBTB5O15062 677 aa24.73■■□□□ 1.55
USP6NL-204ENST00000606752 ADAMTS3O15072 1205 aa24.73■■□□□ 1.55
USP6NL-204ENST00000606752 ATP2B1P20020 1258 aa24.73■■□□□ 1.55
USP6NL-204ENST00000606752 GNA11P29992 359 aa24.73■■□□□ 1.55
USP6NL-204ENST00000606752 ECE1P42892 770 aa24.73■■□□□ 1.55
USP6NL-204ENST00000606752 TRAPPC10P48553 1259 aa24.73■■□□□ 1.55
USP6NL-204ENST00000606752 HIRAP54198 1017 aaPredicted RBP24.73■■□□□ 1.55
USP6NL-204ENST00000606752 LRSAM1Q6UWE0 723 aa24.73■■□□□ 1.55
USP6NL-204ENST00000606752 CCDC73Q6ZRK6 1079 aa24.73■■□□□ 1.55
USP6NL-204ENST00000606752 PIK3AP1Q6ZUJ8 805 aa24.73■■□□□ 1.55
USP6NL-204ENST00000606752 ACER1Q8TDN7 264 aa24.73■■□□□ 1.55
USP6NL-204ENST00000606752 MRPS27Q92552 414 aaKnown RBP24.73■■□□□ 1.55
USP6NL-204ENST00000606752 C6orf50Q9HD87 102 aa24.73■■□□□ 1.55
USP6NL-204ENST00000606752 GINM1Q9NU53 330 aa24.73■■□□□ 1.55
USP6NL-204ENST00000606752 ESYT2A0FGR8 921 aa24.72■■□□□ 1.55
USP6NL-204ENST00000606752 SMCO2A6NFE2 343 aa24.72■■□□□ 1.55
USP6NL-204ENST00000606752 USP17L10C9JJH3 530 aa24.72■■□□□ 1.55
USP6NL-204ENST00000606752 BMP3P12645 472 aa24.72■■□□□ 1.55
USP6NL-204ENST00000606752 NOM1Q5C9Z4 860 aaKnown RBP24.72■■□□□ 1.55
USP6NL-204ENST00000606752 NBPF12Q5TAG4 269 aaPredicted RBP24.72■■□□□ 1.55
USP6NL-204ENST00000606752 FSIP1Q8NA03 581 aa24.72■■□□□ 1.55
USP6NL-204ENST00000606752 HOOK2Q96ED9 719 aa24.72■■□□□ 1.55
USP6NL-204ENST00000606752 GOPCQ9HD26 462 aa24.72■■□□□ 1.55
USP6NL-204ENST00000606752 LMOD1P29536 600 aaPredicted RBP24.72■■□□□ 1.55
USP6NL-204ENST00000606752 NUP62CLQ9H1M0 184 aa24.72■■□□□ 1.55
USP6NL-204ENST00000606752 GOLPH3LQ9H4A5 285 aa24.72■■□□□ 1.55
USP6NL-204ENST00000606752 SH2D4AQ9H788 454 aa24.72■■□□□ 1.55
USP6NL-204ENST00000606752 PCDHA6Q9UN73 950 aa24.72■■□□□ 1.55
USP6NL-204ENST00000606752 PCDHA8Q9Y5H6 950 aa24.72■■□□□ 1.55
USP6NL-204ENST00000606752 MORC2Q9Y6X9 1032 aaPredicted RBP24.72■■□□□ 1.55
USP6NL-204ENST00000606752 CMA1P23946 247 aa24.71■■□□□ 1.55
USP6NL-204ENST00000606752 DCAF15Q66K64 600 aa24.71■■□□□ 1.55
USP6NL-204ENST00000606752 GGA3Q9NZ52 723 aa24.71■■□□□ 1.55
USP6NL-204ENST00000606752 PPP2R3BQ9Y5P8 575 aa24.71■■□□□ 1.55
USP6NL-204ENST00000606752 CTNND1O60716 968 aaKnown RBP24.7■■□□□ 1.55
USP6NL-204ENST00000606752 BMP15O95972 392 aa24.7■■□□□ 1.55
USP6NL-204ENST00000606752 FAM160A1Q05DH4 1040 aa24.7■■□□□ 1.55
USP6NL-204ENST00000606752 ENGASEQ8NFI3 743 aa24.7■■□□□ 1.55
USP6NL-204ENST00000606752 NUP88Q99567 741 aaPredicted RBP24.7■■□□□ 1.55
USP6NL-204ENST00000606752 ADARB2Q9NS39 739 aaKnown RBP24.7■■□□□ 1.55
USP6NL-204ENST00000606752 CCDC194A0A1B0GVG4 234 aa24.7■■□□□ 1.54
USP6NL-204ENST00000606752 CUTAO60888 179 aa24.7■■□□□ 1.54
USP6NL-204ENST00000606752 SNW1Q13573 536 aaKnown RBP24.7■■□□□ 1.54
USP6NL-204ENST00000606752 TTC38Q5R3I4 469 aa24.7■■□□□ 1.54
USP6NL-204ENST00000606752 L1TD1Q5T7N2 865 aaKnown RBP24.7■■□□□ 1.54
USP6NL-204ENST00000606752 PPP1R18Q6NYC8 613 aa24.7■■□□□ 1.54
USP6NL-204ENST00000606752 BTNL9Q6UXG8 535 aa24.7■■□□□ 1.54
USP6NL-204ENST00000606752 KRI1Q8N9T8 703 aaKnown RBP24.7■■□□□ 1.54
USP6NL-204ENST00000606752 COA7Q96BR5 231 aa24.7■■□□□ 1.54
USP6NL-204ENST00000606752 SRCAPQ6ZRS2 3230 aa24.69■■□□□ 1.54
USP6NL-204ENST00000606752 TMEM232C9JQI7 657 aa24.69■■□□□ 1.54
USP6NL-204ENST00000606752 SPICE1Q8N0Z3 855 aa24.69■■□□□ 1.54
USP6NL-204ENST00000606752 RASGRP4Q8TDF6 673 aa24.69■■□□□ 1.54
USP6NL-204ENST00000606752 CLSTN2Q9H4D0 955 aa24.69■■□□□ 1.54
USP6NL-204ENST00000606752 VCPKMTQ9H867 229 aa24.69■■□□□ 1.54
USP6NL-204ENST00000606752 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.69■■□□□ 1.54
USP6NL-204ENST00000606752 PPP1R11O60927 126 aaPredicted RBP24.68■■□□□ 1.54
USP6NL-204ENST00000606752 PTPREP23469 700 aa24.68■■□□□ 1.54
USP6NL-204ENST00000606752 ZNF341Q9BYN7 854 aa24.68■■□□□ 1.54
USP6NL-204ENST00000606752 A0A1B0GVL5 298 aa24.68■■□□□ 1.54
USP6NL-204ENST00000606752 GPR162Q16538 588 aa24.68■■□□□ 1.54
USP6NL-204ENST00000606752 SYDE2Q5VT97 1194 aa24.68■■□□□ 1.54
USP6NL-204ENST00000606752 DPY19L2Q6NUT2 758 aa24.68■■□□□ 1.54
USP6NL-204ENST00000606752 TNMDQ9H2S6 317 aa24.68■■□□□ 1.54
USP6NL-204ENST00000606752 PITPNM2Q9BZ72 1349 aa24.67■■□□□ 1.54
USP6NL-204ENST00000606752 MRE11P49959 708 aa24.67■■□□□ 1.54
USP6NL-204ENST00000606752 IKQ13123 557 aaPredicted RBP24.67■■□□□ 1.54
USP6NL-204ENST00000606752 ZNF174Q15697 407 aa24.67■■□□□ 1.54
USP6NL-204ENST00000606752 CAMK4Q16566 473 aa24.67■■□□□ 1.54
USP6NL-204ENST00000606752 QRICH1Q2TAL8 776 aa24.67■■□□□ 1.54
USP6NL-204ENST00000606752 KIAA1755Q5JYT7 1200 aa24.67■■□□□ 1.54
USP6NL-204ENST00000606752 KRT25Q7Z3Z0 450 aa24.67■■□□□ 1.54
USP6NL-204ENST00000606752 FMR1NBQ8N0W7 255 aaPredicted RBP24.67■■□□□ 1.54
USP6NL-204ENST00000606752 ZNF112Q9UJU3 913 aa24.67■■□□□ 1.54
USP6NL-204ENST00000606752 FBXO2Q9UK22 296 aaPredicted RBP24.67■■□□□ 1.54
USP6NL-204ENST00000606752 SRPRBQ9Y5M8 271 aaKnown RBP24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms