RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 MKRN1Q9UHC7 482 aaKnown RBP13.09□□□□□ -0.31
ZNF540-210ENST00000592533 ADAMTS3O15072 1205 aa13.09□□□□□ -0.31
ZNF540-210ENST00000592533 TUBBP07437 444 aa13.09□□□□□ -0.31
ZNF540-210ENST00000592533 ZNF569Q5MCW4 686 aa13.09□□□□□ -0.31
ZNF540-210ENST00000592533 IRF2BP1Q8IU81 584 aa13.09□□□□□ -0.31
ZNF540-210ENST00000592533 DNAJC7Q99615 494 aa13.09□□□□□ -0.31
ZNF540-210ENST00000592533 NAPGQ99747 312 aaPredicted RBP13.09□□□□□ -0.31
ZNF540-210ENST00000592533 RNF225M0QZC1 329 aaPredicted RBP13.08□□□□□ -0.31
ZNF540-210ENST00000592533 LAD1O00515 517 aa13.08□□□□□ -0.31
ZNF540-210ENST00000592533 EEF1GP26641 437 aaKnown RBP13.08□□□□□ -0.31
ZNF540-210ENST00000592533 AMPD2Q01433 879 aa13.08□□□□□ -0.31
ZNF540-210ENST00000592533 EVX2Q03828 476 aa13.08□□□□□ -0.31
ZNF540-210ENST00000592533 GRM4Q14833 912 aa13.08□□□□□ -0.31
ZNF540-210ENST00000592533 NAALADL2Q58DX5 795 aa13.08□□□□□ -0.31
ZNF540-210ENST00000592533 WWC2Q6AWC2 1192 aa13.08□□□□□ -0.31
ZNF540-210ENST00000592533 ANKRD2Q9GZV1 360 aa13.08□□□□□ -0.31
ZNF540-210ENST00000592533 FAM205AQ6ZU69 1335 aa13.08□□□□□ -0.32
ZNF540-210ENST00000592533 OAS2P29728 719 aaKnown RBP13.08□□□□□ -0.32
ZNF540-210ENST00000592533 PRPHP41219 470 aa13.08□□□□□ -0.32
ZNF540-210ENST00000592533 PRCPP42785 496 aa13.08□□□□□ -0.32
ZNF540-210ENST00000592533 CCDC178Q5BJE1 867 aa13.08□□□□□ -0.32
ZNF540-210ENST00000592533 BEND6Q5SZJ8 279 aaPredicted RBP13.08□□□□□ -0.32
ZNF540-210ENST00000592533 SLC35F6Q8N357 371 aa13.08□□□□□ -0.32
ZNF540-210ENST00000592533 ACRBPQ8NEB7 543 aa13.08□□□□□ -0.32
ZNF540-210ENST00000592533 ZNF507Q8TCN5 953 aa13.08□□□□□ -0.32
ZNF540-210ENST00000592533 STAMQ92783 540 aa13.08□□□□□ -0.32
ZNF540-210ENST00000592533 CELF1Q92879 486 aaKnown RBP13.08□□□□□ -0.32
ZNF540-210ENST00000592533 CCSER1Q9C0I3 900 aa13.08□□□□□ -0.32
ZNF540-210ENST00000592533 THAP9Q9H5L6 903 aa13.08□□□□□ -0.32
ZNF540-210ENST00000592533 MAGEF1Q9HAY2 307 aa13.08□□□□□ -0.32
ZNF540-210ENST00000592533 LGALS16A8MUM7 142 aa13.08□□□□□ -0.32
ZNF540-210ENST00000592533 VEGFAP15692 232 aaPredicted RBP13.08□□□□□ -0.32
ZNF540-210ENST00000592533 PIP4K2BP78356 416 aa13.08□□□□□ -0.32
ZNF540-210ENST00000592533 FAM47AQ5JRC9 791 aa13.08□□□□□ -0.32
ZNF540-210ENST00000592533 TCP11L1Q9NUJ3 509 aa13.08□□□□□ -0.32
ZNF540-210ENST00000592533 KBTBD4Q9NVX7 518 aa13.08□□□□□ -0.32
ZNF540-210ENST00000592533 CALCOCO1Q9P1Z2 691 aa13.08□□□□□ -0.32
ZNF540-210ENST00000592533 CNTNAP4Q9C0A0 1308 aa13.07□□□□□ -0.32
ZNF540-210ENST00000592533 KLRC4O43908 158 aa13.07□□□□□ -0.32
ZNF540-210ENST00000592533 RHOBTB3O94955 611 aa13.07□□□□□ -0.32
ZNF540-210ENST00000592533 STAT6P42226 847 aa13.07□□□□□ -0.32
ZNF540-210ENST00000592533 GNAQP50148 359 aa13.07□□□□□ -0.32
ZNF540-210ENST00000592533 NOC3LQ8WTT2 800 aaKnown RBP13.07□□□□□ -0.32
ZNF540-210ENST00000592533 PSD3Q9NYI0 1048 aa13.07□□□□□ -0.32
ZNF540-210ENST00000592533 TAB2Q9NYJ8 693 aa13.07□□□□□ -0.32
ZNF540-210ENST00000592533 FOCADQ5VW36 1801 aa13.07□□□□□ -0.32
ZNF540-210ENST00000592533 TNRC6CQ9HCJ0 1690 aaKnown RBP13.07□□□□□ -0.32
ZNF540-210ENST00000592533 PARP1P09874 1014 aaKnown RBP13.07□□□□□ -0.32
ZNF540-210ENST00000592533 KLRK1P26718 216 aa13.07□□□□□ -0.32
ZNF540-210ENST00000592533 HIBADHP31937 336 aaKnown RBP13.07□□□□□ -0.32
ZNF540-210ENST00000592533 ACSBG1Q96GR2 724 aa13.07□□□□□ -0.32
ZNF540-210ENST00000592533 NUP88Q99567 741 aaPredicted RBP13.07□□□□□ -0.32
ZNF540-210ENST00000592533 VPS16Q9H269 839 aa13.07□□□□□ -0.32
ZNF540-210ENST00000592533 CUEDC2Q9H467 287 aa13.07□□□□□ -0.32
ZNF540-210ENST00000592533 GDAQ9Y2T3 454 aa13.07□□□□□ -0.32
ZNF540-210ENST00000592533 TSPY2A6NKD2 308 aa13.06□□□□□ -0.32
ZNF540-210ENST00000592533 CYP2D6P10635 497 aa13.06□□□□□ -0.32
ZNF540-210ENST00000592533 KRT9P35527 623 aa13.06□□□□□ -0.32
ZNF540-210ENST00000592533 KIF4BQ2VIQ3 1234 aa13.06□□□□□ -0.32
ZNF540-210ENST00000592533 C12orf60Q5U649 245 aa13.06□□□□□ -0.32
ZNF540-210ENST00000592533 BARGINQ6ZT62 677 aa13.06□□□□□ -0.32
ZNF540-210ENST00000592533 MB21D1Q8N884 522 aa13.06□□□□□ -0.32
ZNF540-210ENST00000592533 GIMAP8Q8ND71 665 aaPredicted RBP13.06□□□□□ -0.32
ZNF540-210ENST00000592533 KAT14Q9H8E8 782 aa13.06□□□□□ -0.32
ZNF540-210ENST00000592533 IL17RBQ9NRM6 502 aa13.06□□□□□ -0.32
ZNF540-210ENST00000592533 REXO2Q9Y3B8 237 aaKnown RBP13.06□□□□□ -0.32
ZNF540-210ENST00000592533 PSMD14O00487 310 aa13.06□□□□□ -0.32
ZNF540-210ENST00000592533 RPS8P62241 208 aaKnown RBP13.06□□□□□ -0.32
ZNF540-210ENST00000592533 MEA1Q16626 185 aa13.06□□□□□ -0.32
ZNF540-210ENST00000592533 TXLNBQ8N3L3 684 aa13.06□□□□□ -0.32
ZNF540-210ENST00000592533 CCDC148Q8NFR7 591 aa13.06□□□□□ -0.32
ZNF540-210ENST00000592533 MAD2L2Q9UI95 211 aa13.06□□□□□ -0.32
ZNF540-210ENST00000592533 CAPN11Q9UMQ6 739 aa13.06□□□□□ -0.32
ZNF540-210ENST00000592533 SPATA31A5Q5VU36 1347 aa13.06□□□□□ -0.32
ZNF540-210ENST00000592533 SPATA31A7Q8IWB4 1347 aa13.06□□□□□ -0.32
ZNF540-210ENST00000592533 NDUFA10O95299 355 aa13.06□□□□□ -0.32
ZNF540-210ENST00000592533 PRDX5P30044 214 aa13.06□□□□□ -0.32
ZNF540-210ENST00000592533 SPTY2D1Q68D10 685 aaPredicted RBP13.06□□□□□ -0.32
ZNF540-210ENST00000592533 DTHD1Q6ZMT9 781 aa13.06□□□□□ -0.32
ZNF540-210ENST00000592533 OR8K1Q8NGG5 319 aa13.06□□□□□ -0.32
ZNF540-210ENST00000592533 PNKPQ96T60 521 aa13.06□□□□□ -0.32
ZNF540-210ENST00000592533 NYXQ9GZU5 481 aa13.06□□□□□ -0.32
ZNF540-210ENST00000592533 PCDHA6Q9UN73 950 aa13.06□□□□□ -0.32
ZNF540-210ENST00000592533 PCDHA8Q9Y5H6 950 aa13.06□□□□□ -0.32
ZNF540-210ENST00000592533 ERLIN1O75477 346 aa13.05□□□□□ -0.32
ZNF540-210ENST00000592533 CDC25AP30304 524 aa13.05□□□□□ -0.32
ZNF540-210ENST00000592533 UBXN1Q04323 297 aa13.05□□□□□ -0.32
ZNF540-210ENST00000592533 COBLL1Q53SF7 1204 aa13.05□□□□□ -0.32
ZNF540-210ENST00000592533 HDXQ7Z353 690 aa13.05□□□□□ -0.32
ZNF540-210ENST00000592533 LINC00116Q8NCU8 138 aa13.05□□□□□ -0.32
ZNF540-210ENST00000592533 PNMA1Q8ND90 353 aa13.05□□□□□ -0.32
ZNF540-210ENST00000592533 HAUS4Q9H6D7 363 aa13.05□□□□□ -0.32
ZNF540-210ENST00000592533 L1RE1Q9UN81 338 aa13.05□□□□□ -0.32
ZNF540-210ENST00000592533 EPN1Q9Y6I3 576 aaPredicted RBP13.05□□□□□ -0.32
ZNF540-210ENST00000592533 MUM1L1Q5H9M0 696 aa13.05□□□□□ -0.32
ZNF540-210ENST00000592533 TYW1BQ6NUM6 668 aa13.05□□□□□ -0.32
ZNF540-210ENST00000592533 TTI2Q6NXR4 508 aa13.05□□□□□ -0.32
ZNF540-210ENST00000592533 WDR93Q6P2C0 686 aa13.05□□□□□ -0.32
ZNF540-210ENST00000592533 EXOC4Q96A65 974 aa13.05□□□□□ -0.32
ZNF540-210ENST00000592533 DHTKD1Q96HY7 919 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms