RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 MTMR7Q9Y216 660 aa26.36■■□□□ 1.81
MBD3-208ENST00000590830 RIPK3Q9Y572 518 aa26.36■■□□□ 1.81
MBD3-208ENST00000590830 IGHA2P01877 340 aa26.35■■□□□ 1.81
MBD3-208ENST00000590830 ZKSCAN1P17029 563 aaPredicted RBP26.35■■□□□ 1.81
MBD3-208ENST00000590830 TTC14Q96N46 770 aa26.35■■□□□ 1.81
MBD3-208ENST00000590830 ZSWIM5Q9P217 1185 aa26.35■■□□□ 1.81
MBD3-208ENST00000590830 TAF6LQ9Y6J9 622 aa26.35■■□□□ 1.81
MBD3-208ENST00000590830 ZBED4O75132 1171 aa26.34■■□□□ 1.81
MBD3-208ENST00000590830 SGPL1O95470 568 aa26.34■■□□□ 1.81
MBD3-208ENST00000590830 CACNB2Q08289 660 aaPredicted RBP26.34■■□□□ 1.81
MBD3-208ENST00000590830 BMP2KLQ5H9B9 411 aa26.34■■□□□ 1.81
MBD3-208ENST00000590830 TRMT44Q8IYL2 757 aaKnown RBP26.34■■□□□ 1.81
MBD3-208ENST00000590830 U2AF1L4Q8WU68 220 aaKnown RBP26.34■■□□□ 1.81
MBD3-208ENST00000590830 DEFB118Q96PH6 123 aa26.34■■□□□ 1.81
MBD3-208ENST00000590830 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.34■■□□□ 1.81
MBD3-208ENST00000590830 RAVER2Q9HCJ3 691 aaKnown RBP26.34■■□□□ 1.81
MBD3-208ENST00000590830 ATP2A1O14983 1001 aa26.33■■□□□ 1.81
MBD3-208ENST00000590830 PLA2G6O60733 806 aa26.33■■□□□ 1.81
MBD3-208ENST00000590830 CYP21A2P08686 494 aa26.33■■□□□ 1.81
MBD3-208ENST00000590830 PRKAR2AP13861 404 aaKnown RBP26.33■■□□□ 1.81
MBD3-208ENST00000590830 ABRAQ8N0Z2 381 aa26.33■■□□□ 1.81
MBD3-208ENST00000590830 CPXCR1Q8N123 301 aa26.33■■□□□ 1.81
MBD3-208ENST00000590830 CHURC1Q8WUH1 139 aa26.33■■□□□ 1.81
MBD3-208ENST00000590830 MAP4K1Q92918 833 aa26.33■■□□□ 1.81
MBD3-208ENST00000590830 TEX13BQ9BXU2 312 aa26.33■■□□□ 1.81
MBD3-208ENST00000590830 ISY1Q9ULR0 285 aaKnown RBP26.33■■□□□ 1.81
MBD3-208ENST00000590830 RPTORQ8N122 1335 aa26.33■■□□□ 1.81
MBD3-208ENST00000590830 COL11A1P12107 1806 aaPredicted RBP26.32■■□□□ 1.8
MBD3-208ENST00000590830 LAMA4Q16363 1823 aa26.32■■□□□ 1.8
MBD3-208ENST00000590830 STAT2P52630 851 aa26.32■■□□□ 1.8
MBD3-208ENST00000590830 SNRNP48Q6IEG0 339 aaKnown RBP26.32■■□□□ 1.8
MBD3-208ENST00000590830 TTBK2Q6IQ55 1244 aa26.32■■□□□ 1.8
MBD3-208ENST00000590830 DPP9Q86TI2 863 aa26.32■■□□□ 1.8
MBD3-208ENST00000590830 FAM160B2Q86V87 743 aa26.32■■□□□ 1.8
MBD3-208ENST00000590830 DCAF4Q8WV16 495 aa26.32■■□□□ 1.8
MBD3-208ENST00000590830 HMX1Q9NP08 348 aaPredicted RBP26.32■■□□□ 1.8
MBD3-208ENST00000590830 U3KPZ7 1027 aaPredicted RBP26.32■■□□□ 1.8
MBD3-208ENST00000590830 NEFLP07196 543 aa26.31■■□□□ 1.8
MBD3-208ENST00000590830 FCER1AP12319 257 aa26.31■■□□□ 1.8
MBD3-208ENST00000590830 NT5C2P49902 561 aa26.31■■□□□ 1.8
MBD3-208ENST00000590830 DGKHQ86XP1 1220 aa26.31■■□□□ 1.8
MBD3-208ENST00000590830 ANKS1AQ92625 1134 aa26.31■■□□□ 1.8
MBD3-208ENST00000590830 ESYT1Q9BSJ8 1104 aa26.31■■□□□ 1.8
MBD3-208ENST00000590830 CRISPLD2Q9H0B8 497 aa26.31■■□□□ 1.8
MBD3-208ENST00000590830 SNAP25P60880 206 aa26.3■■□□□ 1.8
MBD3-208ENST00000590830 UBE2Q1Q7Z7E8 422 aa26.3■■□□□ 1.8
MBD3-208ENST00000590830 ZSCAN10Q96SZ4 725 aaPredicted RBP26.3■■□□□ 1.8
MBD3-208ENST00000590830 MMP19Q99542 508 aa26.3■■□□□ 1.8
MBD3-208ENST00000590830 KRT23Q9C075 422 aa26.3■■□□□ 1.8
MBD3-208ENST00000590830 LSG1Q9H089 658 aaKnown RBP26.3■■□□□ 1.8
MBD3-208ENST00000590830 PRR12Q9ULL5 1215 aa26.3■■□□□ 1.8
MBD3-208ENST00000590830 ZNF536O15090 1300 aa26.3■■□□□ 1.8
MBD3-208ENST00000590830 PGK2P07205 417 aa26.29■■□□□ 1.8
MBD3-208ENST00000590830 PDHBP11177 359 aa26.29■■□□□ 1.8
MBD3-208ENST00000590830 CCND3P30281 292 aaPredicted RBP26.29■■□□□ 1.8
MBD3-208ENST00000590830 CYP2C19P33261 490 aa26.29■■□□□ 1.8
MBD3-208ENST00000590830 SLC4A3P48751 1232 aa26.29■■□□□ 1.8
MBD3-208ENST00000590830 IKQ13123 557 aaPredicted RBP26.29■■□□□ 1.8
MBD3-208ENST00000590830 CCDC96Q2M329 555 aa26.29■■□□□ 1.8
MBD3-208ENST00000590830 CYB5R4Q7L1T6 521 aa26.29■■□□□ 1.8
MBD3-208ENST00000590830 ENAHQ8N8S7 591 aaPredicted RBP26.29■■□□□ 1.8
MBD3-208ENST00000590830 CNNM2Q9H8M5 875 aa26.29■■□□□ 1.8
MBD3-208ENST00000590830 TFRCP02786 760 aaKnown RBP26.28■■□□□ 1.8
MBD3-208ENST00000590830 SNHG28P0DPA3 235 aa26.28■■□□□ 1.8
MBD3-208ENST00000590830 COPB2P35606 906 aa26.28■■□□□ 1.8
MBD3-208ENST00000590830 SLC16A2P36021 539 aa26.28■■□□□ 1.8
MBD3-208ENST00000590830 OAZ1P54368 228 aa26.28■■□□□ 1.8
MBD3-208ENST00000590830 BTNL9Q6UXG8 535 aa26.28■■□□□ 1.8
MBD3-208ENST00000590830 STOX1Q6ZVD7 989 aa26.28■■□□□ 1.8
MBD3-208ENST00000590830 IQCA1Q86XH1 822 aa26.28■■□□□ 1.8
MBD3-208ENST00000590830 GPCPD1Q9NPB8 672 aa26.28■■□□□ 1.8
MBD3-208ENST00000590830 CTDP1Q9Y5B0 961 aaPredicted RBP26.28■■□□□ 1.8
MBD3-208ENST00000590830 RBM8AQ9Y5S9 174 aaKnown RBP26.28■■□□□ 1.8
MBD3-208ENST00000590830 FRMPD2Q68DX3 1309 aaPredicted RBP26.28■■□□□ 1.8
MBD3-208ENST00000590830 FDX1P10109 184 aa26.27■■□□□ 1.8
MBD3-208ENST00000590830 MFSD14CQ5VZR4 134 aa26.27■■□□□ 1.8
MBD3-208ENST00000590830 OLFML2BQ68BL8 750 aa26.27■■□□□ 1.8
MBD3-208ENST00000590830 TRPV1Q8NER1 839 aa26.27■■□□□ 1.8
MBD3-208ENST00000590830 AGBL1Q96MI9 1066 aa26.27■■□□□ 1.8
MBD3-208ENST00000590830 ZNF236Q9UL36 1845 aa26.26■■□□□ 1.79
MBD3-208ENST00000590830 E7EWF7 191 aa26.26■■□□□ 1.79
MBD3-208ENST00000590830 ZNF543Q08ER8 600 aa26.26■■□□□ 1.79
MBD3-208ENST00000590830 KCTD2Q14681 263 aa26.26■■□□□ 1.79
MBD3-208ENST00000590830 ZNF792Q3KQV3 632 aa26.26■■□□□ 1.79
MBD3-208ENST00000590830 CCDC178Q5BJE1 867 aa26.26■■□□□ 1.79
MBD3-208ENST00000590830 MAML3Q96JK9 1138 aa26.26■■□□□ 1.79
MBD3-208ENST00000590830 TNKSO95271 1327 aa26.25■■□□□ 1.79
MBD3-208ENST00000590830 LHX8Q68G74 356 aa26.25■■□□□ 1.79
MBD3-208ENST00000590830 CCDC174Q6PII3 467 aa26.25■■□□□ 1.79
MBD3-208ENST00000590830 SEC23AQ15436 765 aa26.24■■□□□ 1.79
MBD3-208ENST00000590830 SYDE2Q5VT97 1194 aa26.24■■□□□ 1.79
MBD3-208ENST00000590830 KIAA1211Q6ZU35 1233 aa26.24■■□□□ 1.79
MBD3-208ENST00000590830 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.24■■□□□ 1.79
MBD3-208ENST00000590830 PNMA1Q8ND90 353 aa26.24■■□□□ 1.79
MBD3-208ENST00000590830 SLC5A4Q9NY91 659 aa26.24■■□□□ 1.79
MBD3-208ENST00000590830 DNAJC25-GNG10A0A024R161 153 aa26.23■■□□□ 1.79
MBD3-208ENST00000590830 TAL1P17542 331 aaPredicted RBP26.23■■□□□ 1.79
MBD3-208ENST00000590830 MNX1P50219 401 aaPredicted RBP26.23■■□□□ 1.79
MBD3-208ENST00000590830 PRAMEF19Q5SWL8 479 aa26.23■■□□□ 1.79
MBD3-208ENST00000590830 CHST13Q8NET6 341 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms