RNA–Protein interactions for RNA: ENST00000588935.1

CNN1-208, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-208ENST00000588935 SGMS1Q86VZ5 419 aa17.02■□□□□ 0.32
CNN1-208ENST00000588935 CPXCR1Q8N123 301 aa17.02■□□□□ 0.32
CNN1-208ENST00000588935 CMTR1Q8N1G2 835 aaKnown RBP17.02■□□□□ 0.32
CNN1-208ENST00000588935 CCDC82Q8N4S0 544 aa17.02■□□□□ 0.32
CNN1-208ENST00000588935 PRPF38AQ8NAV1 312 aaKnown RBP17.02■□□□□ 0.32
CNN1-208ENST00000588935 CTCFLQ8NI51 663 aaPredicted RBP17.02■□□□□ 0.32
CNN1-208ENST00000588935 RBPJLQ9UBG7 517 aa17.02■□□□□ 0.32
CNN1-208ENST00000588935 MAD2L2Q9UI95 211 aa17.02■□□□□ 0.32
CNN1-208ENST00000588935 PRR12Q9ULL5 1215 aa17.02■□□□□ 0.32
CNN1-208ENST00000588935 RLFQ13129 1914 aa17.02■□□□□ 0.31
CNN1-208ENST00000588935 GOLGA8AA7E2F4 631 aa17.01■□□□□ 0.31
CNN1-208ENST00000588935 GOLGA8BA8MQT2 603 aa17.01■□□□□ 0.31
CNN1-208ENST00000588935 ZBED4O75132 1171 aa17.01■□□□□ 0.31
CNN1-208ENST00000588935 DDAH1O94760 285 aa17.01■□□□□ 0.31
CNN1-208ENST00000588935 CCT2P78371 535 aaKnown RBP17.01■□□□□ 0.31
CNN1-208ENST00000588935 Q3C1V9 767 aa17.01■□□□□ 0.31
CNN1-208ENST00000588935 ASPRV1Q53RT3 343 aa17.01■□□□□ 0.31
CNN1-208ENST00000588935 GPATCH4Q5T3I0 446 aaKnown RBP17.01■□□□□ 0.31
CNN1-208ENST00000588935 SYDE2Q5VT97 1194 aa17.01■□□□□ 0.31
CNN1-208ENST00000588935 C17orf99Q6UX52 265 aa17.01■□□□□ 0.31
CNN1-208ENST00000588935 FANCBQ8NB91 859 aa17.01■□□□□ 0.31
CNN1-208ENST00000588935 IL17RAQ96F46 866 aa17.01■□□□□ 0.31
CNN1-208ENST00000588935 TXNRD2Q9NNW7 524 aa17.01■□□□□ 0.31
CNN1-208ENST00000588935 BTBD7Q9P203 1132 aa17.01■□□□□ 0.31
CNN1-208ENST00000588935 COL11A1P12107 1806 aaPredicted RBP17■□□□□ 0.31
CNN1-208ENST00000588935 PARP14Q460N5 1801 aa17■□□□□ 0.31
CNN1-208ENST00000588935 PALM3A6NDB9 673 aaPredicted RBP17■□□□□ 0.31
CNN1-208ENST00000588935 GPR25O00155 361 aa17■□□□□ 0.31
CNN1-208ENST00000588935 VWA5AO00534 786 aa17■□□□□ 0.31
CNN1-208ENST00000588935 CALM1P0DP23 149 aa17■□□□□ 0.31
CNN1-208ENST00000588935 CALM2P0DP24 149 aa17■□□□□ 0.31
CNN1-208ENST00000588935 CALM3P0DP25 149 aa17■□□□□ 0.31
CNN1-208ENST00000588935 GCLCP48506 637 aaPredicted RBP17■□□□□ 0.31
CNN1-208ENST00000588935 RTN1Q16799 776 aa17■□□□□ 0.31
CNN1-208ENST00000588935 AGXT2Q9BYV1 514 aa17■□□□□ 0.31
CNN1-208ENST00000588935 RAVER2Q9HCJ3 691 aaKnown RBP17■□□□□ 0.31
CNN1-208ENST00000588935 SAGE1Q9NXZ1 904 aa17■□□□□ 0.31
CNN1-208ENST00000588935 CASP8AP2Q9UKL3 1982 aa17■□□□□ 0.31
CNN1-208ENST00000588935 ADGRA2Q96PE1 1338 aa16.99■□□□□ 0.31
CNN1-208ENST00000588935 CNMDO75829 334 aa16.99■□□□□ 0.31
CNN1-208ENST00000588935 PLEKHA8P1O95397 391 aa16.99■□□□□ 0.31
CNN1-208ENST00000588935 PDIA3P30101 505 aaKnown RBP16.99■□□□□ 0.31
CNN1-208ENST00000588935 KIF5BP33176 963 aa16.99■□□□□ 0.31
CNN1-208ENST00000588935 LBX1P52954 281 aa16.99■□□□□ 0.31
CNN1-208ENST00000588935 RABEP1Q15276 862 aa16.99■□□□□ 0.31
CNN1-208ENST00000588935 WDR78Q5VTH9 848 aa16.99■□□□□ 0.31
CNN1-208ENST00000588935 NBPF11Q86T75 865 aa16.99■□□□□ 0.31
CNN1-208ENST00000588935 CCAR1Q8IX12 1150 aaKnown RBP16.99■□□□□ 0.31
CNN1-208ENST00000588935 ADGRF4Q8IZF3 695 aa16.99■□□□□ 0.31
CNN1-208ENST00000588935 GPRC5AQ8NFJ5 357 aa16.99■□□□□ 0.31
CNN1-208ENST00000588935 SMCHD1A6NHR9 2005 aa16.99■□□□□ 0.31
CNN1-208ENST00000588935 DTNBO60941 627 aa16.98■□□□□ 0.31
CNN1-208ENST00000588935 PPFIA3O75145 1194 aa16.98■□□□□ 0.31
CNN1-208ENST00000588935 HSPA8P11142 646 aaKnown RBP16.98■□□□□ 0.31
CNN1-208ENST00000588935 BCRP11274 1271 aa16.98■□□□□ 0.31
CNN1-208ENST00000588935 TAL1P17542 331 aaPredicted RBP16.98■□□□□ 0.31
CNN1-208ENST00000588935 CDC27P30260 824 aa16.98■□□□□ 0.31
CNN1-208ENST00000588935 ADD1P35611 737 aaKnown RBP16.98■□□□□ 0.31
CNN1-208ENST00000588935 METAP2P50579 478 aaKnown RBP eCLIP16.98■□□□□ 0.31
CNN1-208ENST00000588935 SP3Q02447 781 aa16.98■□□□□ 0.31
CNN1-208ENST00000588935 TMEM132BQ14DG7 1078 aa16.98■□□□□ 0.31
CNN1-208ENST00000588935 ANKRD1Q15327 319 aa16.98■□□□□ 0.31
CNN1-208ENST00000588935 BTNL9Q6UXG8 535 aa16.98■□□□□ 0.31
CNN1-208ENST00000588935 LBX2Q6XYB7 198 aa16.98■□□□□ 0.31
CNN1-208ENST00000588935 HOMER1Q86YM7 354 aa16.98■□□□□ 0.31
CNN1-208ENST00000588935 FBXL16Q8N461 479 aa16.98■□□□□ 0.31
CNN1-208ENST00000588935 NCOA5Q9HCD5 579 aaKnown RBP16.98■□□□□ 0.31
CNN1-208ENST00000588935 TPCN1Q9ULQ1 816 aa16.98■□□□□ 0.31
CNN1-208ENST00000588935 HPS5Q9UPZ3 1129 aa16.98■□□□□ 0.31
CNN1-208ENST00000588935 RABGAP1Q9Y3P9 1069 aa16.98■□□□□ 0.31
CNN1-208ENST00000588935 MYH6P13533 1939 aa16.98■□□□□ 0.31
CNN1-208ENST00000588935 hCG_1642624A0A1W2PR95 340 aa16.97■□□□□ 0.31
CNN1-208ENST00000588935 PLA2G6O60733 806 aa16.97■□□□□ 0.31
CNN1-208ENST00000588935 FKTNO75072 461 aa16.97■□□□□ 0.31
CNN1-208ENST00000588935 ERVK-9P63128 1117 aa16.97■□□□□ 0.31
CNN1-208ENST00000588935 ERVK-24P63145 666 aa16.97■□□□□ 0.31
CNN1-208ENST00000588935 SLC35G1Q2M3R5 365 aa16.97■□□□□ 0.31
CNN1-208ENST00000588935 SRBD1Q8N5C6 995 aaKnown RBP16.97■□□□□ 0.31
CNN1-208ENST00000588935 CD99L2Q8TCZ2 262 aa16.97■□□□□ 0.31
CNN1-208ENST00000588935 GTF3C2Q8WUA4 911 aaPredicted RBP16.97■□□□□ 0.31
CNN1-208ENST00000588935 ZNF296Q8WUU4 475 aaPredicted RBP16.97■□□□□ 0.31
CNN1-208ENST00000588935 AGBL1Q96MI9 1066 aa16.97■□□□□ 0.31
CNN1-208ENST00000588935 ALDH8A1Q9H2A2 487 aaPredicted RBP16.97■□□□□ 0.31
CNN1-208ENST00000588935 JMJD4Q9H9V9 463 aa16.97■□□□□ 0.31
CNN1-208ENST00000588935 CWC22Q9HCG8 908 aaKnown RBP16.97■□□□□ 0.31
CNN1-208ENST00000588935 ADAMTS5Q9UNA0 930 aa16.97■□□□□ 0.31
CNN1-208ENST00000588935 MYPNQ86TC9 1320 aa16.96■□□□□ 0.31
CNN1-208ENST00000588935 STAT3P40763 770 aa16.96■□□□□ 0.31
CNN1-208ENST00000588935 CTCFP49711 727 aaPredicted RBP16.96■□□□□ 0.31
CNN1-208ENST00000588935 GNAQP50148 359 aa16.96■□□□□ 0.31
CNN1-208ENST00000588935 CDC37Q16543 378 aaPredicted RBP16.96■□□□□ 0.31
CNN1-208ENST00000588935 NCAPG2Q86XI2 1143 aa16.96■□□□□ 0.31
CNN1-208ENST00000588935 MB21D1Q8N884 522 aa16.96■□□□□ 0.31
CNN1-208ENST00000588935 NECAB1Q8N987 351 aa16.96■□□□□ 0.31
CNN1-208ENST00000588935 PIGSQ96S52 555 aa16.96■□□□□ 0.31
CNN1-208ENST00000588935 MAP3K14Q99558 947 aa16.96■□□□□ 0.31
CNN1-208ENST00000588935 CFHR5Q9BXR6 569 aa16.96■□□□□ 0.31
CNN1-208ENST00000588935 ARHGAP39Q9C0H5 1083 aa16.96■□□□□ 0.31
CNN1-208ENST00000588935 SPATC1LQ9H0A9 340 aa16.96■□□□□ 0.31
CNN1-208ENST00000588935 SLKQ9H2G2 1235 aaPredicted RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms