RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 WDR46O15213 610 aaKnown RBP16.77■□□□□ 0.27
NPC1-207ENST00000588867 TRIM29Q14134 588 aa16.77■□□□□ 0.27
NPC1-207ENST00000588867 RBM46Q8TBY0 533 aaKnown RBP16.77■□□□□ 0.27
NPC1-207ENST00000588867 JMJD4Q9H9V9 463 aa16.77■□□□□ 0.27
NPC1-207ENST00000588867 MTMR6Q9Y217 621 aa16.77■□□□□ 0.27
NPC1-207ENST00000588867 ZDHHC9Q9Y397 364 aa16.77■□□□□ 0.27
NPC1-207ENST00000588867 SCG2P13521 617 aa16.76■□□□□ 0.27
NPC1-207ENST00000588867 PDIA4P13667 645 aaKnown RBP16.76■□□□□ 0.27
NPC1-207ENST00000588867 VCAM1P19320 739 aa16.76■□□□□ 0.27
NPC1-207ENST00000588867 PFKFB3Q16875 520 aaPredicted RBP16.76■□□□□ 0.27
NPC1-207ENST00000588867 SMC1BQ8NDV3 1235 aa16.76■□□□□ 0.27
NPC1-207ENST00000588867 CHURC1Q8WUH1 139 aa16.76■□□□□ 0.27
NPC1-207ENST00000588867 TANGO6Q9C0B7 1094 aa16.76■□□□□ 0.27
NPC1-207ENST00000588867 BRD1O95696 1058 aa16.75■□□□□ 0.27
NPC1-207ENST00000588867 XBP1P17861 261 aa16.75■□□□□ 0.27
NPC1-207ENST00000588867 SYDE2Q5VT97 1194 aa16.75■□□□□ 0.27
NPC1-207ENST00000588867 MCTP1Q6DN14 999 aa16.75■□□□□ 0.27
NPC1-207ENST00000588867 FBXO18Q8NFZ0 1043 aa16.75■□□□□ 0.27
NPC1-207ENST00000588867 GPKOWQ92917 476 aaPredicted RBP eCLIP16.75■□□□□ 0.27
NPC1-207ENST00000588867 KIFC2Q96AC6 838 aa16.75■□□□□ 0.27
NPC1-207ENST00000588867 RPAP3Q9H6T3 665 aaPredicted RBP16.75■□□□□ 0.27
NPC1-207ENST00000588867 VPS54Q9P1Q0 977 aa16.75■□□□□ 0.27
NPC1-207ENST00000588867 UNCXA6NJT0 531 aa16.75■□□□□ 0.27
NPC1-207ENST00000588867 ZSCAN22P10073 491 aaPredicted RBP16.75■□□□□ 0.27
NPC1-207ENST00000588867 SNAP25P60880 206 aa16.75■□□□□ 0.27
NPC1-207ENST00000588867 KRT40Q6A162 431 aa16.75■□□□□ 0.27
NPC1-207ENST00000588867 BTNL9Q6UXG8 535 aa16.75■□□□□ 0.27
NPC1-207ENST00000588867 HEATR3Q7Z4Q2 680 aa16.75■□□□□ 0.27
NPC1-207ENST00000588867 FBXO28Q9NVF7 368 aa16.75■□□□□ 0.27
NPC1-207ENST00000588867 FEM1BQ9UK73 627 aa16.75■□□□□ 0.27
NPC1-207ENST00000588867 PRR12Q9ULL5 1215 aa16.75■□□□□ 0.27
NPC1-207ENST00000588867 TRPM7Q96QT4 1865 aa16.74■□□□□ 0.27
NPC1-207ENST00000588867 PPIL2Q13356 520 aa16.74■□□□□ 0.27
NPC1-207ENST00000588867 FERMT3Q86UX7 667 aa16.74■□□□□ 0.27
NPC1-207ENST00000588867 KCNJ14Q9UNX9 436 aa16.74■□□□□ 0.27
NPC1-207ENST00000588867 PNMA6FA0A0J9YX94 578 aa16.74■□□□□ 0.27
NPC1-207ENST00000588867 TOMM70O94826 608 aa16.74■□□□□ 0.27
NPC1-207ENST00000588867 HUNKP57058 714 aa16.74■□□□□ 0.27
NPC1-207ENST00000588867 SH3D19Q5HYK7 790 aa16.74■□□□□ 0.27
NPC1-207ENST00000588867 GADL1Q6ZQY3 521 aa16.74■□□□□ 0.27
NPC1-207ENST00000588867 FAM160B2Q86V87 743 aa16.74■□□□□ 0.27
NPC1-207ENST00000588867 C12orf42Q96LP6 360 aa16.74■□□□□ 0.27
NPC1-207ENST00000588867 CXCL11O14625 94 aa16.73■□□□□ 0.27
NPC1-207ENST00000588867 ZBTB5O15062 677 aa16.73■□□□□ 0.27
NPC1-207ENST00000588867 FLOT1O75955 427 aa16.73■□□□□ 0.27
NPC1-207ENST00000588867 CDC37Q16543 378 aaPredicted RBP16.73■□□□□ 0.27
NPC1-207ENST00000588867 FOXD4L6Q3SYB3 417 aaPredicted RBP16.73■□□□□ 0.27
NPC1-207ENST00000588867 WWC2Q6AWC2 1192 aa16.73■□□□□ 0.27
NPC1-207ENST00000588867 FOXD4L3Q6VB84 417 aaPredicted RBP16.73■□□□□ 0.27
NPC1-207ENST00000588867 PASKQ96RG2 1323 aa16.73■□□□□ 0.27
NPC1-207ENST00000588867 PLA2G6O60733 806 aa16.72■□□□□ 0.27
NPC1-207ENST00000588867 F13A1P00488 732 aa16.72■□□□□ 0.27
NPC1-207ENST00000588867 GJA5P36382 358 aa16.72■□□□□ 0.27
NPC1-207ENST00000588867 MKRN3Q13064 507 aaKnown RBP16.72■□□□□ 0.27
NPC1-207ENST00000588867 QRICH1Q2TAL8 776 aa16.72■□□□□ 0.27
NPC1-207ENST00000588867 ZNF784Q8NCA9 323 aaPredicted RBP16.72■□□□□ 0.27
NPC1-207ENST00000588867 TNPO1Q92973 898 aaKnown RBP16.72■□□□□ 0.27
NPC1-207ENST00000588867 SLF1Q9BQI6 1058 aa16.72■□□□□ 0.27
NPC1-207ENST00000588867 A0A0G2JLL6 359 aaPredicted RBP16.72■□□□□ 0.27
NPC1-207ENST00000588867 NLRP5P59047 1200 aa16.72■□□□□ 0.27
NPC1-207ENST00000588867 GNL2Q13823 731 aaKnown RBP16.72■□□□□ 0.27
NPC1-207ENST00000588867 PRRT2Q7Z6L0 340 aaPredicted RBP16.72■□□□□ 0.27
NPC1-207ENST00000588867 PRPF38AQ8NAV1 312 aaKnown RBP16.72■□□□□ 0.27
NPC1-207ENST00000588867 COA7Q96BR5 231 aa16.72■□□□□ 0.27
NPC1-207ENST00000588867 MTMR8Q96EF0 704 aa16.72■□□□□ 0.27
NPC1-207ENST00000588867 KCNH4Q9UQ05 1017 aa16.72■□□□□ 0.27
NPC1-207ENST00000588867 NAPAP54920 295 aa16.71■□□□□ 0.27
NPC1-207ENST00000588867 SAFBQ15424 915 aaKnown RBP eCLIP16.71■□□□□ 0.27
NPC1-207ENST00000588867 SHISA4Q96DD7 197 aa16.71■□□□□ 0.27
NPC1-207ENST00000588867 WNK4Q96J92 1243 aa16.71■□□□□ 0.27
NPC1-207ENST00000588867 BARHL2Q9NY43 387 aa16.71■□□□□ 0.27
NPC1-207ENST00000588867 STXBP3O00186 592 aa16.7■□□□□ 0.26
NPC1-207ENST00000588867 MMP1P03956 469 aa16.7■□□□□ 0.26
NPC1-207ENST00000588867 TREML2Q5T2D2 321 aa16.7■□□□□ 0.26
NPC1-207ENST00000588867 CCDC174Q6PII3 467 aa16.7■□□□□ 0.26
NPC1-207ENST00000588867 SH3GLB2Q9NR46 395 aa16.7■□□□□ 0.26
NPC1-207ENST00000588867 PTPRFP10586 1907 aa16.7■□□□□ 0.26
NPC1-207ENST00000588867 USP17L15C9J2P7 530 aa16.7■□□□□ 0.26
NPC1-207ENST00000588867 USP17L13C9JLJ4 530 aa16.7■□□□□ 0.26
NPC1-207ENST00000588867 USP17L11C9JVI0 530 aa16.7■□□□□ 0.26
NPC1-207ENST00000588867 USP17L18D6R9N7 530 aa16.7■□□□□ 0.26
NPC1-207ENST00000588867 USP17L22D6RA61 530 aa16.7■□□□□ 0.26
NPC1-207ENST00000588867 USP17L17D6RBQ6 530 aa16.7■□□□□ 0.26
NPC1-207ENST00000588867 USP17L19D6RCP7 530 aa16.7■□□□□ 0.26
NPC1-207ENST00000588867 USP17L20D6RJB6 530 aa16.7■□□□□ 0.26
NPC1-207ENST00000588867 PPP1R11O60927 126 aaPredicted RBP16.7■□□□□ 0.26
NPC1-207ENST00000588867 USP17L24Q0WX57 530 aa16.7■□□□□ 0.26
NPC1-207ENST00000588867 SNAPC2Q13487 334 aa16.7■□□□□ 0.26
NPC1-207ENST00000588867 TYW1BQ6NUM6 668 aa16.7■□□□□ 0.26
NPC1-207ENST00000588867 CATSPERGQ6ZRH7 1159 aa16.7■□□□□ 0.26
NPC1-207ENST00000588867 PHF20Q9BVI0 1012 aa16.7■□□□□ 0.26
NPC1-207ENST00000588867 CTDP1Q9Y5B0 961 aaPredicted RBP16.7■□□□□ 0.26
NPC1-207ENST00000588867 ZNF157P51786 506 aaPredicted RBP16.69■□□□□ 0.26
NPC1-207ENST00000588867 COG2Q14746 738 aa16.69■□□□□ 0.26
NPC1-207ENST00000588867 USH1GQ495M9 461 aa16.69■□□□□ 0.26
NPC1-207ENST00000588867 SAPCD2Q86UD0 394 aa16.69■□□□□ 0.26
NPC1-207ENST00000588867 FBXO11Q86XK2 927 aa16.69■□□□□ 0.26
NPC1-207ENST00000588867 PROCA1Q8NCQ7 364 aaPredicted RBP16.69■□□□□ 0.26
NPC1-207ENST00000588867 RGS22Q8NE09 1264 aa16.69■□□□□ 0.26
NPC1-207ENST00000588867 CCDC148Q8NFR7 591 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms