RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 NPLOC4Q8TAT6 608 aa13.48□□□□□ -0.25
CCDC47-206ENST00000584112 EDC3Q96F86 508 aaKnown RBP13.48□□□□□ -0.25
CCDC47-206ENST00000584112 UBE2ZQ9H832 354 aaPredicted RBP13.48□□□□□ -0.25
CCDC47-206ENST00000584112 PALD1Q9ULE6 856 aa13.48□□□□□ -0.25
CCDC47-206ENST00000584112 USP5P45974 858 aa13.47□□□□□ -0.25
CCDC47-206ENST00000584112 ATP2B2Q01814 1243 aa13.47□□□□□ -0.25
CCDC47-206ENST00000584112 FAM47AQ5JRC9 791 aa13.47□□□□□ -0.25
CCDC47-206ENST00000584112 PTCRAQ6ISU1 281 aaPredicted RBP13.47□□□□□ -0.25
CCDC47-206ENST00000584112 PSRC1Q6PGN9 363 aaPredicted RBP13.47□□□□□ -0.25
CCDC47-206ENST00000584112 CCDC174Q6PII3 467 aa13.47□□□□□ -0.25
CCDC47-206ENST00000584112 CCAR1Q8IX12 1150 aaKnown RBP13.47□□□□□ -0.25
CCDC47-206ENST00000584112 SIRT2Q8IXJ6 389 aa13.47□□□□□ -0.25
CCDC47-206ENST00000584112 MIGA1Q8NAN2 632 aa13.47□□□□□ -0.25
CCDC47-206ENST00000584112 ANTXR1Q9H6X2 564 aa13.47□□□□□ -0.25
CCDC47-206ENST00000584112 RBPJLQ9UBG7 517 aa13.47□□□□□ -0.25
CCDC47-206ENST00000584112 TBX21Q9UL17 535 aa13.47□□□□□ -0.25
CCDC47-206ENST00000584112 PHF24Q9UPV7 400 aa13.47□□□□□ -0.25
CCDC47-206ENST00000584112 PRR23AA6NEV1 266 aa13.46□□□□□ -0.25
CCDC47-206ENST00000584112 ARHGEF15O94989 841 aa13.46□□□□□ -0.25
CCDC47-206ENST00000584112 KCNA5P22460 613 aa13.46□□□□□ -0.25
CCDC47-206ENST00000584112 RRP1BQ14684 758 aaKnown RBP13.46□□□□□ -0.25
CCDC47-206ENST00000584112 SH3D19Q5HYK7 790 aa13.46□□□□□ -0.25
CCDC47-206ENST00000584112 OTOP2Q7RTS6 562 aa13.46□□□□□ -0.25
CCDC47-206ENST00000584112 ARNTL2Q8WYA1 636 aa13.46□□□□□ -0.25
CCDC47-206ENST00000584112 PAGR1Q9BTK6 254 aa13.46□□□□□ -0.25
CCDC47-206ENST00000584112 WDR18Q9BV38 432 aa13.46□□□□□ -0.25
CCDC47-206ENST00000584112 SAP30BPQ9UHR5 308 aaKnown RBP13.46□□□□□ -0.25
CCDC47-206ENST00000584112 FAM208BQ5VWN6 2430 aa13.46□□□□□ -0.25
CCDC47-206ENST00000584112 COL4A4P53420 1690 aaPredicted RBP13.46□□□□□ -0.26
CCDC47-206ENST00000584112 CA3P07451 260 aa13.45□□□□□ -0.26
CCDC47-206ENST00000584112 HOXB3P14651 431 aaPredicted RBP13.45□□□□□ -0.26
CCDC47-206ENST00000584112 ERVK-9P63128 1117 aa13.45□□□□□ -0.26
CCDC47-206ENST00000584112 ERVK-24P63145 666 aa13.45□□□□□ -0.26
CCDC47-206ENST00000584112 IRX3P78415 501 aaPredicted RBP13.45□□□□□ -0.26
CCDC47-206ENST00000584112 GRB10Q13322 594 aa13.45□□□□□ -0.26
CCDC47-206ENST00000584112 ACAP1Q15027 740 aa13.45□□□□□ -0.26
CCDC47-206ENST00000584112 LEXMQ3ZCV2 418 aa13.45□□□□□ -0.26
CCDC47-206ENST00000584112 TTC6Q86TZ1 520 aa13.45□□□□□ -0.26
CCDC47-206ENST00000584112 DNAJC2Q99543 621 aaKnown RBP13.45□□□□□ -0.26
CCDC47-206ENST00000584112 PPP1R12CQ9BZL4 782 aa13.45□□□□□ -0.26
CCDC47-206ENST00000584112 DNAJC18Q9H819 358 aa13.45□□□□□ -0.26
CCDC47-206ENST00000584112 TMOD4Q9NZQ9 345 aa13.45□□□□□ -0.26
CCDC47-206ENST00000584112 PCDHA11Q9Y5I1 949 aa13.45□□□□□ -0.26
CCDC47-206ENST00000584112 EP300Q09472 2414 aaPredicted RBP13.45□□□□□ -0.26
CCDC47-206ENST00000584112 MAGEB6P1A0A0J9YX57 407 aa13.44□□□□□ -0.26
CCDC47-206ENST00000584112 A0A1W2PQ45 241 aaPredicted RBP13.44□□□□□ -0.26
CCDC47-206ENST00000584112 A0A1W2PQY0 241 aa13.44□□□□□ -0.26
CCDC47-206ENST00000584112 DCDC2CA8MYV0 355 aa13.44□□□□□ -0.26
CCDC47-206ENST00000584112 C19orf81C9J6K1 198 aa13.44□□□□□ -0.26
CCDC47-206ENST00000584112 GOLIM4O00461 696 aa13.44□□□□□ -0.26
CCDC47-206ENST00000584112 PDE6AP16499 860 aa13.44□□□□□ -0.26
CCDC47-206ENST00000584112 BACE1P56817 501 aa13.44□□□□□ -0.26
CCDC47-206ENST00000584112 HERVK_113P62684 666 aa13.44□□□□□ -0.26
CCDC47-206ENST00000584112 PRAMEF19Q5SWL8 479 aa13.44□□□□□ -0.26
CCDC47-206ENST00000584112 SLC9C2Q5TAH2 1124 aa13.44□□□□□ -0.26
CCDC47-206ENST00000584112 C20orf194Q5TEA3 1177 aa13.44□□□□□ -0.26
CCDC47-206ENST00000584112 DGLUCYQ7Z3D6 616 aa13.44□□□□□ -0.26
CCDC47-206ENST00000584112 SPRED2Q7Z698 418 aa13.44□□□□□ -0.26
CCDC47-206ENST00000584112 PRRX2Q99811 253 aa13.44□□□□□ -0.26
CCDC47-206ENST00000584112 CRNKL1Q9BZJ0 848 aaKnown RBP13.44□□□□□ -0.26
CCDC47-206ENST00000584112 BCL11AQ9H165 835 aa13.44□□□□□ -0.26
CCDC47-206ENST00000584112 EHD4Q9H223 541 aa13.44□□□□□ -0.26
CCDC47-206ENST00000584112 CWC22Q9HCG8 908 aaKnown RBP13.44□□□□□ -0.26
CCDC47-206ENST00000584112 MUTYHQ9UIF7 546 aa13.44□□□□□ -0.26
CCDC47-206ENST00000584112 SERPINB13Q9UIV8 391 aa13.44□□□□□ -0.26
CCDC47-206ENST00000584112 ZBTB21Q9ULJ3 1066 aa13.44□□□□□ -0.26
CCDC47-206ENST00000584112 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.43□□□□□ -0.26
CCDC47-206ENST00000584112 GRXCR2A6NFK2 248 aa13.43□□□□□ -0.26
CCDC47-206ENST00000584112 USP17L10C9JJH3 530 aa13.43□□□□□ -0.26
CCDC47-206ENST00000584112 H0Y858 1186 aa13.43□□□□□ -0.26
CCDC47-206ENST00000584112 LPXNO60711 386 aa13.43□□□□□ -0.26
CCDC47-206ENST00000584112 GDF11O95390 407 aa13.43□□□□□ -0.26
CCDC47-206ENST00000584112 FGBP02675 491 aa13.43□□□□□ -0.26
CCDC47-206ENST00000584112 ATP5JP18859 108 aa13.43□□□□□ -0.26
CCDC47-206ENST00000584112 MTMR2Q13614 643 aa13.43□□□□□ -0.26
CCDC47-206ENST00000584112 ANKRD33Q7Z3H0 272 aa13.43□□□□□ -0.26
CCDC47-206ENST00000584112 PBXIP1Q96AQ6 731 aa13.43□□□□□ -0.26
CCDC47-206ENST00000584112 RMDN1Q96DB5 314 aa13.43□□□□□ -0.26
CCDC47-206ENST00000584112 RIOK1Q9BRS2 568 aaKnown RBP13.43□□□□□ -0.26
CCDC47-206ENST00000584112 LRRCC1Q9C099 1032 aa13.43□□□□□ -0.26
CCDC47-206ENST00000584112 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.43□□□□□ -0.26
CCDC47-206ENST00000584112 IL23AQ9NPF7 189 aa13.43□□□□□ -0.26
CCDC47-206ENST00000584112 TLR9Q9NR96 1032 aa13.43□□□□□ -0.26
CCDC47-206ENST00000584112 PAG1Q9NWQ8 432 aa13.43□□□□□ -0.26
CCDC47-206ENST00000584112 ZNF532Q9HCE3 1301 aa13.42□□□□□ -0.26
CCDC47-206ENST00000584112 PROB1E7EW31 1015 aa13.42□□□□□ -0.26
CCDC47-206ENST00000584112 SEPT4O43236 478 aa13.42□□□□□ -0.26
CCDC47-206ENST00000584112 IGHA2P01877 340 aa13.42□□□□□ -0.26
CCDC47-206ENST00000584112 ST3GAL2Q16842 350 aa13.42□□□□□ -0.26
CCDC47-206ENST00000584112 WDR78Q5VTH9 848 aa13.42□□□□□ -0.26
CCDC47-206ENST00000584112 TATDN1Q6P1N9 297 aa13.42□□□□□ -0.26
CCDC47-206ENST00000584112 TMEM199Q8N511 208 aa13.42□□□□□ -0.26
CCDC47-206ENST00000584112 CEP250Q9BV73 2442 aa13.42□□□□□ -0.26
CCDC47-206ENST00000584112 PARP14Q460N5 1801 aa13.41□□□□□ -0.26
CCDC47-206ENST00000584112 PGK1P00558 417 aa13.41□□□□□ -0.26
CCDC47-206ENST00000584112 POLR3DP05423 398 aaPredicted RBP13.41□□□□□ -0.26
CCDC47-206ENST00000584112 HOXA7P31268 230 aaPredicted RBP13.41□□□□□ -0.26
CCDC47-206ENST00000584112 CYP2C18P33260 490 aa13.41□□□□□ -0.26
CCDC47-206ENST00000584112 IRS1P35568 1242 aa13.41□□□□□ -0.26
CCDC47-206ENST00000584112 VCPP55072 806 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms