RNA–Protein interactions for RNA: ENST00000583311.1

MIR3960-201, Transcript of microRNA 3960, humanhuman

BASIC

Gene MIR3960, Length 91 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR3960-201ENST00000583311 ARHGAP39Q9C0H5 1083 aa28.6■■■□□ 2.17
MIR3960-201ENST00000583311 SPATC1LQ9H0A9 340 aa28.6■■■□□ 2.17
MIR3960-201ENST00000583311 GPCPD1Q9NPB8 672 aa28.6■■■□□ 2.17
MIR3960-201ENST00000583311 ANAPC15P60006 121 aa28.59■■■□□ 2.17
MIR3960-201ENST00000583311 FGD1P98174 961 aa28.59■■■□□ 2.17
MIR3960-201ENST00000583311 EXOSC10Q01780 885 aaKnown RBP28.59■■■□□ 2.17
MIR3960-201ENST00000583311 Q3C1V9 767 aa28.59■■■□□ 2.17
MIR3960-201ENST00000583311 TRIM47Q96LD4 638 aa28.59■■■□□ 2.17
MIR3960-201ENST00000583311 SLC38A10Q9HBR0 1119 aa28.59■■■□□ 2.17
MIR3960-201ENST00000583311 PEX10O60683 326 aa28.58■■■□□ 2.17
MIR3960-201ENST00000583311 CASTP20810 708 aaKnown RBP28.58■■■□□ 2.17
MIR3960-201ENST00000583311 COPB2P35606 906 aa28.58■■■□□ 2.17
MIR3960-201ENST00000583311 TMEM132BQ14DG7 1078 aa28.58■■■□□ 2.17
MIR3960-201ENST00000583311 TM6SF1Q9BZW5 370 aa28.58■■■□□ 2.17
MIR3960-201ENST00000583311 ECM2O94769 699 aaPredicted RBP28.57■■■□□ 2.16
MIR3960-201ENST00000583311 SLC25A27O95847 323 aa28.57■■■□□ 2.16
MIR3960-201ENST00000583311 OAZ1P54368 228 aa28.57■■■□□ 2.16
MIR3960-201ENST00000583311 COL13A1Q5TAT6 717 aaPredicted RBP28.57■■■□□ 2.16
MIR3960-201ENST00000583311 SYDE2Q5VT97 1194 aa28.57■■■□□ 2.16
MIR3960-201ENST00000583311 SYNE3Q6ZMZ3 975 aa28.57■■■□□ 2.16
MIR3960-201ENST00000583311 SHCBP1Q8NEM2 672 aa28.57■■■□□ 2.16
MIR3960-201ENST00000583311 LRRC2Q9BYS8 371 aa28.57■■■□□ 2.16
MIR3960-201ENST00000583311 PRR12Q9ULL5 1215 aa28.57■■■□□ 2.16
MIR3960-201ENST00000583311 ATP2A1O14983 1001 aa28.56■■■□□ 2.16
MIR3960-201ENST00000583311 MGAMO43451 1857 aa28.56■■■□□ 2.16
MIR3960-201ENST00000583311 DDAH1O94760 285 aa28.56■■■□□ 2.16
MIR3960-201ENST00000583311 SEC24BO95487 1268 aa28.56■■■□□ 2.16
MIR3960-201ENST00000583311 CALM1P0DP23 149 aa28.56■■■□□ 2.16
MIR3960-201ENST00000583311 CALM2P0DP24 149 aa28.56■■■□□ 2.16
MIR3960-201ENST00000583311 CALM3P0DP25 149 aa28.56■■■□□ 2.16
MIR3960-201ENST00000583311 RPS6KB1P23443 525 aa28.56■■■□□ 2.16
MIR3960-201ENST00000583311 CTGFP29279 349 aa28.56■■■□□ 2.16
MIR3960-201ENST00000583311 STAT3P40763 770 aa28.56■■■□□ 2.16
MIR3960-201ENST00000583311 TTBK2Q6IQ55 1244 aa28.56■■■□□ 2.16
MIR3960-201ENST00000583311 ZNF654Q8IZM8 581 aa28.56■■■□□ 2.16
MIR3960-201ENST00000583311 REPS2Q8NFH8 660 aa28.56■■■□□ 2.16
MIR3960-201ENST00000583311 MAP3K14Q99558 947 aa28.56■■■□□ 2.16
MIR3960-201ENST00000583311 MOV10L1Q9BXT6 1211 aaKnown RBP28.56■■■□□ 2.16
MIR3960-201ENST00000583311 TEX13BQ9BXU2 312 aa28.56■■■□□ 2.16
MIR3960-201ENST00000583311 MROH8Q9H579 483 aa28.56■■■□□ 2.16
MIR3960-201ENST00000583311 SENP2Q9HC62 589 aa28.56■■■□□ 2.16
MIR3960-201ENST00000583311 ZNF214Q9UL59 606 aaPredicted RBP28.56■■■□□ 2.16
MIR3960-201ENST00000583311 GOLGA8HP0CJ92 632 aa28.55■■■□□ 2.16
MIR3960-201ENST00000583311 SLC16A2P36021 539 aa28.55■■■□□ 2.16
MIR3960-201ENST00000583311 TROAPQ12815 778 aa28.55■■■□□ 2.16
MIR3960-201ENST00000583311 COL9A3Q14050 684 aaPredicted RBP28.55■■■□□ 2.16
MIR3960-201ENST00000583311 WDR78Q5VTH9 848 aa28.55■■■□□ 2.16
MIR3960-201ENST00000583311 SGMS1Q86VZ5 419 aa28.55■■■□□ 2.16
MIR3960-201ENST00000583311 RIOX2Q8IUF8 465 aa28.55■■■□□ 2.16
MIR3960-201ENST00000583311 PORCNQ9H237 461 aa28.55■■■□□ 2.16
MIR3960-201ENST00000583311 GPHNQ9NQX3 736 aaPredicted RBP28.55■■■□□ 2.16
MIR3960-201ENST00000583311 SRRDQ9UH36 339 aa28.55■■■□□ 2.16
MIR3960-201ENST00000583311 SLC12A7Q9Y666 1083 aa28.55■■■□□ 2.16
MIR3960-201ENST00000583311 CYP46A1Q9Y6A2 500 aa28.55■■■□□ 2.16
MIR3960-201ENST00000583311 KIF5BP33176 963 aa28.54■■■□□ 2.16
MIR3960-201ENST00000583311 CAP1Q01518 475 aa28.54■■■□□ 2.16
MIR3960-201ENST00000583311 GRM4Q14833 912 aa28.54■■■□□ 2.16
MIR3960-201ENST00000583311 FBXO46Q6PJ61 603 aaPredicted RBP28.54■■■□□ 2.16
MIR3960-201ENST00000583311 RUFY3Q7L099 469 aa28.54■■■□□ 2.16
MIR3960-201ENST00000583311 PLEKHH3Q7Z736 793 aa28.54■■■□□ 2.16
MIR3960-201ENST00000583311 CTCFLQ8NI51 663 aaPredicted RBP28.54■■■□□ 2.16
MIR3960-201ENST00000583311 ZSWIM6Q9HCJ5 1215 aa28.54■■■□□ 2.16
MIR3960-201ENST00000583311 PNMA2Q9UL42 364 aa28.54■■■□□ 2.16
MIR3960-201ENST00000583311 IVNS1ABPQ9Y6Y0 642 aa28.54■■■□□ 2.16
MIR3960-201ENST00000583311 COL11A1P12107 1806 aaPredicted RBP28.53■■■□□ 2.16
MIR3960-201ENST00000583311 SNRNP48Q6IEG0 339 aaKnown RBP28.53■■■□□ 2.16
MIR3960-201ENST00000583311 NCAPG2Q86XI2 1143 aa28.53■■■□□ 2.16
MIR3960-201ENST00000583311 CPXCR1Q8N123 301 aa28.53■■■□□ 2.16
MIR3960-201ENST00000583311 NUP133Q8WUM0 1156 aa28.53■■■□□ 2.16
MIR3960-201ENST00000583311 SOCS4Q8WXH5 440 aa28.53■■■□□ 2.16
MIR3960-201ENST00000583311 TCEANC2Q96MN5 208 aa28.53■■■□□ 2.16
MIR3960-201ENST00000583311 PTPN22Q9Y2R2 807 aa28.53■■■□□ 2.16
MIR3960-201ENST00000583311 PALM3A6NDB9 673 aaPredicted RBP28.52■■■□□ 2.16
MIR3960-201ENST00000583311 CPA1P15085 419 aa28.52■■■□□ 2.16
MIR3960-201ENST00000583311 ERCC3P19447 782 aa28.52■■■□□ 2.16
MIR3960-201ENST00000583311 GPR142Q7Z601 462 aa28.52■■■□□ 2.16
MIR3960-201ENST00000583311 FBXL16Q8N461 479 aa28.52■■■□□ 2.16
MIR3960-201ENST00000583311 RANBP17Q9H2T7 1088 aaKnown RBP28.52■■■□□ 2.16
MIR3960-201ENST00000583311 UPF2Q9HAU5 1272 aaKnown RBP28.52■■■□□ 2.16
MIR3960-201ENST00000583311 MAD2L2Q9UI95 211 aa28.52■■■□□ 2.16
MIR3960-201ENST00000583311 ZSWIM8A7E2V4 1837 aa28.52■■■□□ 2.16
MIR3960-201ENST00000583311 KLRF2D3W0D1 207 aa28.51■■■□□ 2.15
MIR3960-201ENST00000583311 STRNO43815 780 aa28.51■■■□□ 2.15
MIR3960-201ENST00000583311 Q6ZUG5 572 aa28.51■■■□□ 2.15
MIR3960-201ENST00000583311 MCOLN1Q9GZU1 580 aa28.51■■■□□ 2.15
MIR3960-201ENST00000583311 UBA5Q9GZZ9 404 aa28.51■■■□□ 2.15
MIR3960-201ENST00000583311 RAVER2Q9HCJ3 691 aaKnown RBP28.51■■■□□ 2.15
MIR3960-201ENST00000583311 DHX16O60231 1041 aaKnown RBP28.5■■■□□ 2.15
MIR3960-201ENST00000583311 GNAQP50148 359 aa28.5■■■□□ 2.15
MIR3960-201ENST00000583311 RAET1EQ8TD07 263 aa28.5■■■□□ 2.15
MIR3960-201ENST00000583311 NUDT12Q9BQG2 462 aa28.5■■■□□ 2.15
MIR3960-201ENST00000583311 PRKCZQ05513 592 aa28.49■■■□□ 2.15
MIR3960-201ENST00000583311 TKFCQ3LXA3 575 aa28.49■■■□□ 2.15
MIR3960-201ENST00000583311 CCDC174Q6PII3 467 aa28.49■■■□□ 2.15
MIR3960-201ENST00000583311 STAG2Q8N3U4 1231 aa28.49■■■□□ 2.15
MIR3960-201ENST00000583311 LZTS2Q9BRK4 669 aa28.49■■■□□ 2.15
MIR3960-201ENST00000583311 FBXO40Q9UH90 709 aa28.49■■■□□ 2.15
MIR3960-201ENST00000583311 SLC15A5A6NIM6 579 aa28.48■■■□□ 2.15
MIR3960-201ENST00000583311 ICAM1P05362 532 aa28.48■■■□□ 2.15
MIR3960-201ENST00000583311 PTPREP23469 700 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms