RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 ADGRF4Q8IZF3 695 aa13.9□□□□□ -0.18
CCDC57-216ENST00000582885 CCDC82Q8N4S0 544 aa13.9□□□□□ -0.18
CCDC57-216ENST00000582885 PROCA1Q8NCQ7 364 aaPredicted RBP13.9□□□□□ -0.18
CCDC57-216ENST00000582885 CNKSR2Q8WXI2 1034 aa13.9□□□□□ -0.18
CCDC57-216ENST00000582885 RRP36Q96EU6 259 aaKnown RBP13.9□□□□□ -0.18
CCDC57-216ENST00000582885 OTUD5Q96G74 571 aa13.9□□□□□ -0.18
CCDC57-216ENST00000582885 NUP88Q99567 741 aaPredicted RBP13.9□□□□□ -0.18
CCDC57-216ENST00000582885 UBA5Q9GZZ9 404 aa13.9□□□□□ -0.18
CCDC57-216ENST00000582885 CHMP5Q9NZZ3 219 aa13.9□□□□□ -0.18
CCDC57-216ENST00000582885 RBBP6Q7Z6E9 1792 aaKnown RBP13.9□□□□□ -0.18
CCDC57-216ENST00000582885 hCG_1984214I3L0E3 225 aa13.89□□□□□ -0.19
CCDC57-216ENST00000582885 ZBTB48P10074 688 aaPredicted RBP13.89□□□□□ -0.19
CCDC57-216ENST00000582885 FDX1P10109 184 aa13.89□□□□□ -0.19
CCDC57-216ENST00000582885 SCG2P13521 617 aa13.89□□□□□ -0.19
CCDC57-216ENST00000582885 SYDE2Q5VT97 1194 aa13.89□□□□□ -0.19
CCDC57-216ENST00000582885 FASTKD5Q7L8L6 764 aaKnown RBP13.89□□□□□ -0.19
CCDC57-216ENST00000582885 ZNF713Q8N859 430 aaPredicted RBP13.89□□□□□ -0.19
CCDC57-216ENST00000582885 PRPF38AQ8NAV1 312 aaKnown RBP13.89□□□□□ -0.19
CCDC57-216ENST00000582885 WNK4Q96J92 1243 aa13.89□□□□□ -0.19
CCDC57-216ENST00000582885 HHIPL1Q96JK4 782 aa13.89□□□□□ -0.19
CCDC57-216ENST00000582885 ALG1Q9BT22 464 aa13.89□□□□□ -0.19
CCDC57-216ENST00000582885 JMJD4Q9H9V9 463 aa13.89□□□□□ -0.19
CCDC57-216ENST00000582885 SH3GLB2Q9NR46 395 aa13.89□□□□□ -0.19
CCDC57-216ENST00000582885 MYPNQ86TC9 1320 aa13.89□□□□□ -0.19
CCDC57-216ENST00000582885 PNMA6FA0A0J9YX94 578 aa13.88□□□□□ -0.19
CCDC57-216ENST00000582885 STX6O43752 255 aa13.88□□□□□ -0.19
CCDC57-216ENST00000582885 XBP1P17861 261 aa13.88□□□□□ -0.19
CCDC57-216ENST00000582885 GJA5P36382 358 aa13.88□□□□□ -0.19
CCDC57-216ENST00000582885 HUNKP57058 714 aa13.88□□□□□ -0.19
CCDC57-216ENST00000582885 TRAF1Q13077 416 aa13.88□□□□□ -0.19
CCDC57-216ENST00000582885 SNAPC2Q13487 334 aa13.88□□□□□ -0.19
CCDC57-216ENST00000582885 SAPCD2Q86UD0 394 aa13.88□□□□□ -0.19
CCDC57-216ENST00000582885 FBXO18Q8NFZ0 1043 aa13.88□□□□□ -0.19
CCDC57-216ENST00000582885 C8orf76Q96K31 380 aa13.88□□□□□ -0.19
CCDC57-216ENST00000582885 CPVLQ9H3G5 476 aa13.88□□□□□ -0.19
CCDC57-216ENST00000582885 RPAP3Q9H6T3 665 aaPredicted RBP13.88□□□□□ -0.19
CCDC57-216ENST00000582885 SEC63Q9UGP8 760 aaKnown RBP13.88□□□□□ -0.19
CCDC57-216ENST00000582885 PRR12Q9ULL5 1215 aa13.88□□□□□ -0.19
CCDC57-216ENST00000582885 TLL2Q9Y6L7 1015 aa13.88□□□□□ -0.19
CCDC57-216ENST00000582885 WDR33Q9C0J8 1336 aaKnown RBP13.88□□□□□ -0.19
CCDC57-216ENST00000582885 TMEM88BA6NKF7 163 aa13.87□□□□□ -0.19
CCDC57-216ENST00000582885 USP17L15C9J2P7 530 aa13.87□□□□□ -0.19
CCDC57-216ENST00000582885 USP17L13C9JLJ4 530 aa13.87□□□□□ -0.19
CCDC57-216ENST00000582885 USP17L11C9JVI0 530 aa13.87□□□□□ -0.19
CCDC57-216ENST00000582885 USP17L18D6R9N7 530 aa13.87□□□□□ -0.19
CCDC57-216ENST00000582885 USP17L22D6RA61 530 aa13.87□□□□□ -0.19
CCDC57-216ENST00000582885 USP17L17D6RBQ6 530 aa13.87□□□□□ -0.19
CCDC57-216ENST00000582885 USP17L19D6RCP7 530 aa13.87□□□□□ -0.19
CCDC57-216ENST00000582885 USP17L20D6RJB6 530 aa13.87□□□□□ -0.19
CCDC57-216ENST00000582885 ZBTB5O15062 677 aa13.87□□□□□ -0.19
CCDC57-216ENST00000582885 DTNBO60941 627 aa13.87□□□□□ -0.19
CCDC57-216ENST00000582885 HOXA7P31268 230 aaPredicted RBP13.87□□□□□ -0.19
CCDC57-216ENST00000582885 SLC16A2P36021 539 aa13.87□□□□□ -0.19
CCDC57-216ENST00000582885 GTF2A2P52657 109 aa13.87□□□□□ -0.19
CCDC57-216ENST00000582885 USP17L24Q0WX57 530 aa13.87□□□□□ -0.19
CCDC57-216ENST00000582885 SPRYD7Q5W111 196 aa13.87□□□□□ -0.19
CCDC57-216ENST00000582885 CATSPERGQ6ZRH7 1159 aa13.87□□□□□ -0.19
CCDC57-216ENST00000582885 PIGSQ96S52 555 aa13.87□□□□□ -0.19
CCDC57-216ENST00000582885 SLF1Q9BQI6 1058 aa13.87□□□□□ -0.19
CCDC57-216ENST00000582885 VAT1LQ9HCJ6 419 aa13.87□□□□□ -0.19
CCDC57-216ENST00000582885 PNMA2Q9UL42 364 aa13.87□□□□□ -0.19
CCDC57-216ENST00000582885 ISY1Q9ULR0 285 aaKnown RBP13.87□□□□□ -0.19
CCDC57-216ENST00000582885 PPFIA3O75145 1194 aa13.86□□□□□ -0.19
CCDC57-216ENST00000582885 BRD1O95696 1058 aa13.86□□□□□ -0.19
CCDC57-216ENST00000582885 CETPP11597 493 aa13.86□□□□□ -0.19
CCDC57-216ENST00000582885 IKQ13123 557 aaPredicted RBP13.86□□□□□ -0.19
CCDC57-216ENST00000582885 PABPC4Q13310 644 aaKnown RBP eCLIP13.86□□□□□ -0.19
CCDC57-216ENST00000582885 DGKZQ13574 1117 aa13.86□□□□□ -0.19
CCDC57-216ENST00000582885 MOGSQ13724 837 aa13.86□□□□□ -0.19
CCDC57-216ENST00000582885 TRIM29Q14134 588 aa13.86□□□□□ -0.19
CCDC57-216ENST00000582885 COG2Q14746 738 aa13.86□□□□□ -0.19
CCDC57-216ENST00000582885 RGMBQ6NW40 437 aa13.86□□□□□ -0.19
CCDC57-216ENST00000582885 AIFM3Q96NN9 605 aa13.86□□□□□ -0.19
CCDC57-216ENST00000582885 TANGO6Q9C0B7 1094 aa13.86□□□□□ -0.19
CCDC57-216ENST00000582885 RANBP17Q9H2T7 1088 aaKnown RBP13.86□□□□□ -0.19
CCDC57-216ENST00000582885 BARHL2Q9NY43 387 aa13.86□□□□□ -0.19
CCDC57-216ENST00000582885 PPP1R9AQ9ULJ8 1098 aa13.86□□□□□ -0.19
CCDC57-216ENST00000582885 ADAMTS5Q9UNA0 930 aa13.86□□□□□ -0.19
CCDC57-216ENST00000582885 AGTPBP1Q9UPW5 1226 aa13.86□□□□□ -0.19
CCDC57-216ENST00000582885 MTMR6Q9Y217 621 aa13.86□□□□□ -0.19
CCDC57-216ENST00000582885 hCG_1642624A0A1W2PR95 340 aa13.85□□□□□ -0.19
CCDC57-216ENST00000582885 H3BQV1 296 aa13.85□□□□□ -0.19
CCDC57-216ENST00000582885 FLOT1O75955 427 aa13.85□□□□□ -0.19
CCDC57-216ENST00000582885 CDC37Q16543 378 aaPredicted RBP13.85□□□□□ -0.19
CCDC57-216ENST00000582885 QRICH1Q2TAL8 776 aa13.85□□□□□ -0.19
CCDC57-216ENST00000582885 IFFO2Q5TF58 517 aa13.85□□□□□ -0.19
CCDC57-216ENST00000582885 KRT40Q6A162 431 aa13.85□□□□□ -0.19
CCDC57-216ENST00000582885 GALNT17Q6IS24 598 aa13.85□□□□□ -0.19
CCDC57-216ENST00000582885 PPP1R18Q6NYC8 613 aa13.85□□□□□ -0.19
CCDC57-216ENST00000582885 HOMER1Q86YM7 354 aa13.85□□□□□ -0.19
CCDC57-216ENST00000582885 TEX2Q8IWB9 1127 aa13.85□□□□□ -0.19
CCDC57-216ENST00000582885 CCDC148Q8NFR7 591 aa13.85□□□□□ -0.19
CCDC57-216ENST00000582885 CCDC12Q8WUD4 166 aaPredicted RBP13.85□□□□□ -0.19
CCDC57-216ENST00000582885 MS4A4AQ96JQ5 239 aa13.85□□□□□ -0.19
CCDC57-216ENST00000582885 FBXO28Q9NVF7 368 aa13.85□□□□□ -0.19
CCDC57-216ENST00000582885 HOXC10Q9NYD6 342 aa13.85□□□□□ -0.19
CCDC57-216ENST00000582885 SLC45A1Q9Y2W3 748 aa13.85□□□□□ -0.19
CCDC57-216ENST00000582885 ZNFX1Q9P2E3 1918 aaKnown RBP13.84□□□□□ -0.19
CCDC57-216ENST00000582885 ESYT2A0FGR8 921 aa13.84□□□□□ -0.19
CCDC57-216ENST00000582885 TESPA1A2RU30 521 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms