RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 FCRL2Q96LA5 508 aaPredicted RBP8.18□□□□□ -1.1
SMCHD1-207ENST00000581711 BDH2Q9BUT1 245 aa8.18□□□□□ -1.1
SMCHD1-207ENST00000581711 TNFRSF10DQ9UBN6 386 aa8.18□□□□□ -1.1
SMCHD1-207ENST00000581711 PCDHA5Q9Y5H7 936 aa8.18□□□□□ -1.1
SMCHD1-207ENST00000581711 TAF6LQ9Y6J9 622 aa8.18□□□□□ -1.1
SMCHD1-207ENST00000581711 FADS2P1A8MWK0 482 aa8.17□□□□□ -1.1
SMCHD1-207ENST00000581711 RGS13O14921 159 aa8.17□□□□□ -1.1
SMCHD1-207ENST00000581711 PF4P02776 101 aa8.17□□□□□ -1.1
SMCHD1-207ENST00000581711 ARL4AP40617 200 aa8.17□□□□□ -1.1
SMCHD1-207ENST00000581711 HSF5Q4G112 596 aaPredicted RBP8.17□□□□□ -1.1
SMCHD1-207ENST00000581711 GPR55Q9Y2T6 319 aaPredicted RBP8.17□□□□□ -1.1
SMCHD1-207ENST00000581711 UBOX5O94941 541 aa8.16□□□□□ -1.1
SMCHD1-207ENST00000581711 TMEM62Q0P6H9 643 aa8.16□□□□□ -1.1
SMCHD1-207ENST00000581711 SNW1Q13573 536 aaKnown RBP8.16□□□□□ -1.1
SMCHD1-207ENST00000581711 RAB3GAP1Q15042 981 aa8.16□□□□□ -1.1
SMCHD1-207ENST00000581711 NBPF9Q3BBW0 867 aa8.16□□□□□ -1.1
SMCHD1-207ENST00000581711 WTIPA6NIX2 430 aaPredicted RBP8.15□□□□□ -1.1
SMCHD1-207ENST00000581711 NUDT19A8MXV4 375 aa8.15□□□□□ -1.1
SMCHD1-207ENST00000581711 BUB1BO60566 1050 aaPredicted RBP8.15□□□□□ -1.1
SMCHD1-207ENST00000581711 PRAMEF1O95521 474 aa8.15□□□□□ -1.1
SMCHD1-207ENST00000581711 NCKAP1LP55160 1127 aa8.15□□□□□ -1.1
SMCHD1-207ENST00000581711 LAPTM5Q13571 262 aa8.15□□□□□ -1.1
SMCHD1-207ENST00000581711 RHOVQ96L33 236 aa8.15□□□□□ -1.1
SMCHD1-207ENST00000581711 RTP5Q14D33 572 aa8.14□□□□□ -1.11
SMCHD1-207ENST00000581711 TNFRSF12AQ9NP84 129 aa8.14□□□□□ -1.11
SMCHD1-207ENST00000581711 USP31Q70CQ4 1352 aa8.13□□□□□ -1.11
SMCHD1-207ENST00000581711 FFAR3O14843 346 aa8.13□□□□□ -1.11
SMCHD1-207ENST00000581711 SIGLEC6O43699 453 aa8.13□□□□□ -1.11
SMCHD1-207ENST00000581711 PRICKLE3O43900 615 aaPredicted RBP8.13□□□□□ -1.11
SMCHD1-207ENST00000581711 PRKCAP17252 672 aa8.13□□□□□ -1.11
SMCHD1-207ENST00000581711 NBPF12Q5TAG4 269 aaPredicted RBP8.13□□□□□ -1.11
SMCHD1-207ENST00000581711 REC114Q7Z4M0 266 aa8.13□□□□□ -1.11
SMCHD1-207ENST00000581711 SLCO6A1Q86UG4 719 aa8.13□□□□□ -1.11
SMCHD1-207ENST00000581711 HOMEZQ8IX15 550 aa8.13□□□□□ -1.11
SMCHD1-207ENST00000581711 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.13□□□□□ -1.11
SMCHD1-207ENST00000581711 CTSHP09668 335 aa8.12□□□□□ -1.11
SMCHD1-207ENST00000581711 INSRRP14616 1297 aa8.12□□□□□ -1.11
SMCHD1-207ENST00000581711 RAG1P15918 1043 aa8.12□□□□□ -1.11
SMCHD1-207ENST00000581711 CYP4F8P98187 520 aa8.12□□□□□ -1.11
SMCHD1-207ENST00000581711 KCNA1Q09470 495 aa8.12□□□□□ -1.11
SMCHD1-207ENST00000581711 ARSHQ5FYA8 562 aa8.12□□□□□ -1.11
SMCHD1-207ENST00000581711 RPTNQ6XPR3 784 aa8.12□□□□□ -1.11
SMCHD1-207ENST00000581711 ERVK13-1Q9NX77 482 aa8.12□□□□□ -1.11
SMCHD1-207ENST00000581711 MINPP1Q9UNW1 487 aa8.12□□□□□ -1.11
SMCHD1-207ENST00000581711 IGFBP6P24592 240 aaPredicted RBP8.11□□□□□ -1.11
SMCHD1-207ENST00000581711 KCNC1P48547 511 aa8.11□□□□□ -1.11
SMCHD1-207ENST00000581711 SLURP1P55000 103 aa8.11□□□□□ -1.11
SMCHD1-207ENST00000581711 CAP1Q01518 475 aa8.11□□□□□ -1.11
SMCHD1-207ENST00000581711 MLECQ14165 292 aa8.11□□□□□ -1.11
SMCHD1-207ENST00000581711 MPP2Q14168 576 aa8.11□□□□□ -1.11
SMCHD1-207ENST00000581711 PUM1Q14671 1186 aaKnown RBP eCLIP8.11□□□□□ -1.11
SMCHD1-207ENST00000581711 CBX2Q14781 532 aaPredicted RBP8.11□□□□□ -1.11
SMCHD1-207ENST00000581711 EAPPQ56P03 285 aaPredicted RBP8.11□□□□□ -1.11
SMCHD1-207ENST00000581711 HHIPL2Q6UWX4 724 aa8.11□□□□□ -1.11
SMCHD1-207ENST00000581711 FBXO27Q8NI29 283 aa8.11□□□□□ -1.11
SMCHD1-207ENST00000581711 TMEM74Q96NL1 305 aa8.11□□□□□ -1.11
SMCHD1-207ENST00000581711 PRDM14Q9GZV8 571 aa8.11□□□□□ -1.11
SMCHD1-207ENST00000581711 PARP2Q9UGN5 583 aa8.11□□□□□ -1.11
SMCHD1-207ENST00000581711 LIMS1P48059 325 aa8.1□□□□□ -1.11
SMCHD1-207ENST00000581711 CEBPAP49715 358 aaPredicted RBP8.1□□□□□ -1.11
SMCHD1-207ENST00000581711 FAM160A1Q05DH4 1040 aa8.1□□□□□ -1.11
SMCHD1-207ENST00000581711 PSMD2Q13200 908 aa8.1□□□□□ -1.11
SMCHD1-207ENST00000581711 PLEKHN1Q494U1 663 aaPredicted RBP8.1□□□□□ -1.11
SMCHD1-207ENST00000581711 SNAP47Q5SQN1 464 aa8.1□□□□□ -1.11
SMCHD1-207ENST00000581711 NUP43Q8NFH3 380 aa8.1□□□□□ -1.11
SMCHD1-207ENST00000581711 ACSL6Q9UKU0 697 aa8.1□□□□□ -1.11
SMCHD1-207ENST00000581711 IRS2Q9Y4H2 1338 aa8.09□□□□□ -1.11
SMCHD1-207ENST00000581711 A0A1W2PQ45 241 aaPredicted RBP8.09□□□□□ -1.11
SMCHD1-207ENST00000581711 A0A1W2PQY0 241 aa8.09□□□□□ -1.11
SMCHD1-207ENST00000581711 ENDOUP21128 410 aaKnown RBP8.09□□□□□ -1.11
SMCHD1-207ENST00000581711 GBP2P32456 591 aaPredicted RBP8.09□□□□□ -1.11
SMCHD1-207ENST00000581711 DAB2P98082 770 aa8.09□□□□□ -1.11
SMCHD1-207ENST00000581711 ZFYVE27Q5T4F4 411 aa8.09□□□□□ -1.11
SMCHD1-207ENST00000581711 GOLM1Q8NBJ4 401 aa8.09□□□□□ -1.11
SMCHD1-207ENST00000581711 CDADC1Q9BWV3 514 aa8.09□□□□□ -1.11
SMCHD1-207ENST00000581711 CHST7Q9NS84 486 aa8.09□□□□□ -1.11
SMCHD1-207ENST00000581711 GMIPQ9P107 970 aa8.09□□□□□ -1.11
SMCHD1-207ENST00000581711 MYRFQ9Y2G1 1151 aa8.09□□□□□ -1.11
SMCHD1-207ENST00000581711 POLR2BP30876 1174 aaKnown RBP8.08□□□□□ -1.12
SMCHD1-207ENST00000581711 ZNF200P98182 395 aaPredicted RBP8.08□□□□□ -1.12
SMCHD1-207ENST00000581711 NLGN1Q8N2Q7 840 aa8.08□□□□□ -1.12
SMCHD1-207ENST00000581711 IMPACTQ9P2X3 320 aa8.08□□□□□ -1.12
SMCHD1-207ENST00000581711 CNOT11Q9UKZ1 510 aaKnown RBP8.08□□□□□ -1.12
SMCHD1-207ENST00000581711 K7ESM1 405 aa8.07□□□□□ -1.12
SMCHD1-207ENST00000581711 PFKLP17858 780 aa8.07□□□□□ -1.12
SMCHD1-207ENST00000581711 MAPKAPK2P49137 400 aa8.07□□□□□ -1.12
SMCHD1-207ENST00000581711 RAD51AP2Q09MP3 1159 aa8.07□□□□□ -1.12
SMCHD1-207ENST00000581711 ZC3H14Q6PJT7 736 aaKnown RBP8.07□□□□□ -1.12
SMCHD1-207ENST00000581711 RELL1Q8IUW5 271 aa8.07□□□□□ -1.12
SMCHD1-207ENST00000581711 MEIS1O00470 390 aa8.06□□□□□ -1.12
SMCHD1-207ENST00000581711 ZNF205O95201 554 aa8.06□□□□□ -1.12
SMCHD1-207ENST00000581711 VWA3BQ502W6 1294 aa8.06□□□□□ -1.12
SMCHD1-207ENST00000581711 UBXN11Q5T124 520 aa8.06□□□□□ -1.12
SMCHD1-207ENST00000581711 EAF1Q96JC9 268 aaPredicted RBP8.06□□□□□ -1.12
SMCHD1-207ENST00000581711 ZNF512BQ96KM6 892 aaPredicted RBP8.06□□□□□ -1.12
SMCHD1-207ENST00000581711 GPR20Q99678 358 aa8.06□□□□□ -1.12
SMCHD1-207ENST00000581711 RSRP1Q9BUV0 290 aa8.06□□□□□ -1.12
SMCHD1-207ENST00000581711 ANKRD33BA6NCL7 494 aa8.05□□□□□ -1.12
SMCHD1-207ENST00000581711 TLR3O15455 904 aaKnown RBP8.05□□□□□ -1.12
SMCHD1-207ENST00000581711 GARTP22102 1010 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms